| Entry |
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| Symbol |
trim25l
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| Name |
(RefSeq) tripartite motif-containing protein 16
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| KO |
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| Organism |
ssco Scomber scombrus (Atlantic mackerel)
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| Pathway |
| ssco04622 | RIG-I-like receptor signaling pathway |
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| Brite |
Enzymes [BR:ssco01000]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134006574 (trim25l)
Ubiquitin system [BR:ssco04121]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134006574 (trim25l)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
24:complement(12488402..12495687)
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| AA seq |
803 aa
MSGKLWTEEQFNCPVCLDLPNDPVTIPCGHSYCMACIKDYWSKDDPKGIYSCPQCRQTFC
PKPTLSRNTMLAEAVEQLRKGARMSDVRESMRSARGVSSSSSGSKGKLSSAAVPCDMCKG
KQRAAVKSCLVCMSSYCESHLKPHQTQKAMKKHELIAPTSNLSEKICTQHKYLQEFFCRE
CKMYICWLCTSNQHKGHQCVSTKAERLDKQKLLSEIQTENQQRLKEREQELKDMKKMMEM
MKRSASRVHDDTEKVLAELQRSVERLQELLEEVLDEVGLEKMGQAQEVVGSLEAEIKELK
RRDTEMKDLVRCEDHIHYLQTYESMCSPLESGDLPPVIVNPEASFEPVRETILDLRERVE
ELCNQELGKITKQVNDTTLFTLGDAKGSTELKGGIFKLFSGFGSRNTNSRSPAPPTTSVG
TRSTDRRGLGLGFKSYDVRSRETPQGSVLGPLVEGGQHQTKPHSQPQRVPFSLEQVQSEP
GCPYRSPESYSCPSASSYSYSYSCPSASSCPSSNSCTSINWRYKTYPCFSRMASISSLFR
SHRRGTTPATPISHTPANNTPSAGGNLFNPSLFLDSPSPNSMNHAPAFPALREINLDSIQ
APEPRTREEFLQYSVNLNLDPNTAHRRLTLSDNNTKATLQGAAQPYPDTSQRFDGWTQVM
CQSPLYAQRCYWEVEWRGRGSSMGVAYGALNRKGSDARAGLGYNAQSWTLELSDTCCSAM
HDNEKKDIPVAYSPRLGIYLDMSTGTLAFYSVAESLTHLHTFRANFTQPLYAAFGVGSGV
GVGLDFALGQFSSSSDSIKICPM |
|---|
| NT seq |
2412 nt +upstreamnt +downstreamnt
atgagtgggaaactatggacagaggagcagtttaattgcccggtgtgcctggatctccca
aatgatccagtcaccatcccctgtgggcacagctactgcatggcctgcatcaaggactac
tggagcaaggatgaccccaaggggatctacagctgcccccaatgccgtcagaccttctgc
cccaagcccaccctgtccaggaacaccatgctggccgaagccgtggagcagctccgcaaa
ggtgcccgcatgtctgatgtaagggaatctatgcgaagcgcccgtggggtttcttcttct
tcatctggatccaaagggaagttgtcctcagcagctgtgccatgcgacatgtgcaaagga
aaacagcgggcagcagtcaagagctgcctggtgtgtatgagctcatactgcgaatctcac
ctgaagccccaccagacccaaaaggccatgaaaaaacacgagctgattgcccccacaagc
aatctgtctgagaagatctgtacccagcacaagtacctgcaggagttcttctgtcgcgag
tgtaagatgtatatctgctggctgtgcaccagcaaccagcacaaaggccatcagtgtgtg
tccaccaaggcggagcgcttggataaacagaaactgctgtcagagattcagacagagaat
cagcagagactgaaagagagagagcaggagctgaaagatatgaagaagatgatggagatg
atgaagcgctctgcaagcagggtacatgatgacacggagaaggtgctggccgagctgcag
cgctcggtggagcgtctgcaggagctgctggaggaggtgctggatgaggttggcctggag
aagatgggccaggcccaagaagtggtcggcagcctggaggctgagatcaaggagctgaag
agaagagacactgaaatgaaggacttggtccgctgtgaagaccacatccactatctgcag
acatacgagtccatgtgcagtcccctggagtcgggggacttgccccctgtgattgtcaat
ccagaagcttcctttgagcctgttcgcgagaccatcctggacctcagggagcgagtggag
gaactgtgcaaccaggaactgggcaagatcaccaaacaagtcaatgacacaactctgttt
actctgggtgacgccaaagggagcacagaactgaagggcggcatttttaaattgttttct
ggttttggttctcgcaacacaaacagccgttcaccagcaccacccactacctccgttgga
acacggagcactgacagacgaggactgggtttaggctttaaaagttatgacgtgaggagc
agagaaacaccacaaggctctgttctgggtcctctcgttgagggaggccaacaccagacc
aagccccactcccagccgcagagagtcccattctctctggagcaggtccagtcagagcca
ggctgcccataccgcagtcccgaatcctactcctgccccagtgccagttcctactcctac
tcctactcctgccccagcgccagctcctgccccagctccaactcctgcaccagcatcaac
tggaggtataaaacttacccttgtttcagtcggatggcatcgatcagcagcctcttccgc
tcccatcgccgtggcaccaccccagccacccccatcagccataccccagccaacaacaca
ccatctgcaggaggaaacctatttaaccctagcctgttcttggattcgcccagccctaac
tccatgaatcatgctcctgctttccctgcattgagagaaattaaccttgacagcatccag
gccccagagccaaggaccagagaggagttcctacaatactctgtgaacttgaaccttgac
cctaacacagcccacagacgcctgactctttccgacaacaacactaaggccaccctgcag
ggggcggcgcagccctaccctgacacttcacagcgttttgacggctggacccaggtgatg
tgccagagcccgctgtacgcccaacgctgttactgggaagtggagtggcgaggcagagga
tcctctatgggtgtagcctacggtgcattgaacaggaagggctcagacgccagggcaggg
ctgggctacaatgcccagtcctggaccctggagctgtcagacacatgctgctcagccatg
catgacaatgagaagaaagacataccggtcgcctactccccccgtctgggcatctacctg
gacatgtccacggggacgcttgcattctacagcgtggcagaaagcctgacacaccttcac
accttccgtgctaacttcactcagccgctttacgctgccttcggggtggggagtggagtc
ggggtgggtctggactttgccctcggccagttcagctccagctctgacagcatcaagatc
tgtcccatgtga |
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