Scomber scombrus (Atlantic mackerel): 134006654
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Entry
134006654 CDS
T10651
Name
(RefSeq) bile salt export pump-like
KO
K05664
ATP-binding cassette, subfamily B (MDR/TAP), member 11
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
134006654
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssco02000
]
134006654
04147 Exosome [BR:
ssco04147
]
134006654
Transporters [BR:
ssco02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB11 subgroup
134006654
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
134006654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
AAA_29
AAA_16
AAA_15
ABC_ATPase
AAA_30
AAA_21
Zeta_toxin
Rad17
Motif
Other DBs
NCBI-GeneID:
134006654
NCBI-ProteinID:
XP_062301587
LinkDB
All DBs
Position
24:13217174..13236921
Genome browser
AA seq
1356 aa
AA seq
DB search
MPTGSVRLQSIKKLGQENHSYEVSDDEPAGTYMTMTTPKEKEKAQGNTEKPAIRVGFFQL
FRFATCNERLMMVVGSVCAVLHGSAQPLMLLVFGLLTDTFIEYDIELNELSDDRKECVNN
TIQWKRNYTNHSPGTPLNFSNFDNATWEMFVPISNRSCGVLDIEYEMTLFAFYYVGIGAA
VFILGYFQISLWVTAAAKQIQLIRKMYFSKVMRMEIGWFDCTSVGELNTRMSDDINKIND
AIADQVAIFLQRFTTFVCGFCVGFVKGWKLTLVIVAASPLIGVGAGLMALFVAKMTSLEL
QAYAKAGAIADEVLSSIRTVAAFGGELKEVQRYDKNLISAQRWGIRKGLIMGFFTGYMWL
IIFLCYGLAFWYGSSLVVDAGEYTPGTLLQVFFGVLIAAMNLGQASPCLEAFAAGRGAAT
IIFETIDREPEIDCLSEAGYKLDRVKGDIEFHNVTFHYPSRPEVKILDQLSVSVKSGETT
AFVGPSGAGKSTAIQLIQRFYDPKEGMVTLDGHDIRGLNIQWLRSLIGIVEQEPVLFATT
IAENIRYGRPRVTMDDIISAAKEANAYNFIMDLPQKFDTLVGEGGGQMSGGQKQRIAIAR
ALVRNPRILLLDMATSALDNESEATVQEALDKVRQGRTTISIAHRLSTIKNADVIVGYDH
GRAVEKGKHNELLERKGVYFTLVTLQSQGDKALNEKAQKMADNNEEPEKLSLSRAGSYRA
SLRASIRQRSRSQLSNLIPESAVPIAGDLSPRAYADKSKDDIPEEEEQELVEPAPVARIL
KYNIPEWPYMLFGSIGAAINGGVNPVYSLLFSQILATFSLTDSDAQRREIDGICLFFVMV
GVVSFFTQMLQGYAFSKSGELLTRRLRRLGFHAMLGQEIGWFDDHRNSPGALTTRLATDA
SQVQGATGSQIGMIVNSMTNIGVAILMSFYFSWKLTLLILCFLPFIALSGGFQAKMLTGF
AKQDKQAMEAAGQISGEALNNIRTIAGLGKERSFVDMYYAQLDAPYEAALKKANVYGACY
GFAQCVVFLTNSASYRFGGYLVRQEGLHFSLVFRVISAIVTSGTALGRASSYTPDYAKAK
ISAARFFQLLDRVPSISVYSDKGDKWDNFQGNIEFIDCKFTYPTRPDIQVLNGLNVSVKP
GQTLAFVGSSGCGKSTSVQLLERFYDPDHGRVLIDGHDSTRVSVPFLRSKIGIVSQEPIL
FDCSIGENIKYGDNLREISMNEIISAAKKAQLHDFVMSLPEKYDTNVGAQGSQLSRGQKQ
RIAIARAIIRDPKILLLDEATSALDTESEKTVQDALDKAREGRTCIVIAHRLSTIQNSDI
IAVMSRGYVIEKGAHDQLMSLKGAYYKLVTTGAPIS
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccggatcagtgagattgcagagtatcaaaaaattgggacaggaaaaccacagc
tatgaggtttcagatgacgaaccagctggcacctatatgaccatgacaactcccaaggag
aaggagaaagctcagggaaacacagagaagccagcgataagggttggcttctttcagctg
ttccgttttgccacatgcaacgagaggctgatgatggtcgtgggcagtgtgtgcgcggtg
cttcacggttcagcgcagcctctcatgcttctggtgttcggcctgctcactgacaccttc
atcgagtacgacatcgagctcaatgagctgagcgacgacaggaaggagtgcgtgaacaac
accatccagtggaagaggaactacacaaatcacagcccgggaacgccactgaactttagc
aactttgacaatgcaacgtgggagatgttcgtaccaatcagcaacaggtcgtgtggggtt
ctcgacattgaatatgaaatgaccttgtttgccttctattacgttggaattggagcagct
gtattcattttgggatactttcagatctctctatgggtgacggctgctgccaagcagatt
cagctcatcaggaaaatgtatttcagtaaagtgatgaggatggagatcggctggttcgac
tgcacctccgtgggggagctcaacactcgcatgtcagatgatatcaacaagatcaacgat
gctatcgcggatcaagttgccatttttttgcagcgcttcaccacctttgtgtgtggcttc
tgcgttggctttgtgaaaggatggaagttaacacttgtcatcgttgcagcaagtccactg
attggtgttggagctgggcttatggctctgtttgttgctaagatgaccagtttggagctt
caggcctatgccaaagctggagctatagccgatgaggtcctctcctctatcaggactgta
gctgcttttggtggggagttgaaagaagtgcaaaggtatgacaagaacttgatctcagcg
cagcgctggggcatcaggaaaggtctgatcatgggttttttcactggatacatgtggctg
atcatcttcctgtgctatggtctggccttctggtacggttccagtcttgtggttgatgct
ggggagtacacaccaggaacattactgcaggtattttttggtgttctgatagcggccatg
aatttggggcaggcctctccatgtcttgaggcgtttgctgcaggccgtggagctgctacc
atcatctttgagactattgacagagagccggagattgactgtttatccgaggctggttat
aagcttgacagggtcaaaggagatattgagtttcacaatgtgactttccactacccctcc
aggcctgaagtcaagatcttggaccagctcagtgtttcggtgaagtcaggggagaccacg
gcgtttgtagggccgagtggagctggaaagagtactgctattcaactcatacagcgcttc
tacgaccctaaagaaggaatggtgaccctggacggtcatgacatcagagggctgaacatc
caatggctgcgctcgctgattggcattgtggagcaggagcctgtgctgtttgccaccacc
attgctgagaacatacgctacggtcgaccccgcgtcaccatggacgacatcatcagtgcc
gccaaggaggccaatgcatacaacttcatcatggatctgccacagaaatttgacaccttg
gtgggagagggtggaggtcagatgagcggcggtcagaagcaacgtattgccatcgccagg
gcgctggtcaggaaccctcgtatcctgctgctggacatggcgacctctgccctcgacaac
gagagcgaggctacagttcaagaggctttagataaagtacgccagggtcgcaccaccatc
tccatcgctcaccggctgtccactataaagaacgctgatgtgattgtgggctatgatcat
ggccgggctgtggagaagggcaaacacaatgagctgctggagcggaagggggtctacttc
actctggtcaccctgcagagccaaggagacaaggccctcaatgagaaggctcaaaaaatg
gctgacaataacgaagagccagagaagctcagcctatccagagccggcagctaccgtgcc
agtttgagagcatccatccgccagcggtccagatcccagctgtccaacttgatcccagag
tctgctgttcccatagctggagatctcagccccagagcctatgcagacaaatccaaggat
gacatcccggaagaggaggaacaggaactcgtggagccagctccggttgccaggatcctg
aagtacaatatacccgagtggccatacatgctttttggatccatcggggctgccataaac
ggaggggtcaaccctgtctactctttattgttcagtcaaatcttggcgacattctcactt
acagattctgatgctcagaggcgggagattgatggtatctgcctgttctttgtcatggtt
ggcgtggtctctttcttcacccagatgctgcagggttatgcattctctaagtctggagag
ctactgacccgcaggttacggaggctgggcttccacgccatgctgggccaagagatcggc
tggtttgatgatcacaggaacagccctggagctctgaccacacgtctggcgaccgatgcc
tcccaagttcaaggggccacgggctcacagatcggtatgatcgtcaactccatgaccaac
atcggtgtggccatcctcatgtccttctacttcagctggaagctcacattgctcatcctg
tgcttcctgccgttcattgccctgtcaggtggcttccaggctaagatgctcacaggcttc
gcaaagcaggacaagcaggccatggaggccgctggacagatttccggtgaggctctaaac
aacatccgcaccatcgcaggcctggggaaggagaggagttttgtggacatgtattatgcc
cagctggacgctccgtacgaggcagccttgaagaaggctaacgtgtatggagcctgctac
ggtttcgcccagtgcgtcgtcttcttgaccaactcggcctcctacaggttcgggggttac
ttggttcgacaggaggggctccacttcagcctggtgttcagggtcatctcagccatcgtc
accagcggcacagccctcggcagagcctcctcttacaccccagactacgccaaggccaag
atttcagctgcacgtttcttccagctgcttgaccgagtgccgagcatcagcgtttacagt
gacaagggagataaatgggataacttccaaggcaacattgagttcattgactgcaagttt
acttaccccaccagaccagacatccaggtcctcaatgggctgaatgtgtcggtgaagcct
ggccagacgctggcatttgttggtagcagcggctgcgggaagagcaccagcgtgcagctg
ctggagaggttttatgatcctgatcatggcagagtgctgattgatggccatgactccact
cgtgtcagcgtgcccttcctgcgatccaagattggcatcgtatcccaggagcccatcttg
ttcgactgcagcatcggagagaacatcaagtatggcgacaacttgcgggaaatcagcatg
aatgagatcatctcggccgccaagaaggcccagcttcatgactttgtcatgtcacttcct
gagaaatacgacaccaacgtcggcgcccaaggttctcagttgtctcgcggtcagaagcag
cgcattgccatcgccagggcaatcatacgcgaccccaagatcctgctcctggatgaggcc
acttctgccctggacaccgagagcgagaagaccgtgcaagacgcgctggacaaagccaga
gaaggacggacctgcatcgttatcgcccatcgcctgtcgaccattcagaattctgacatt
atcgccgtcatgtccaggggatatgtgatcgagaaaggagcgcacgaccagctcatgtcc
ctgaagggagcctactacaagctggtcaccacaggagcaccaattagctaa
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