Mammaliicoccus sciuri: CEP64_03565
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Entry
CEP64_03565 CDS
T05176
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
sscu
Mammaliicoccus sciuri
Brite
KEGG Orthology (KO) [BR:
sscu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sscu03009
]
CEP64_03565
Enzymes [BR:
sscu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CEP64_03565
Ribosome biogenesis [BR:
sscu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CEP64_03565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_15
Cons_hypoth95
Methyltransf_25
PrmA
MTS
TRM5-TYW2_MTfase
TRAM
Methyltransf_11
N6_N4_Mtase
Methyltransf_32
Methyltransf_12
NodS
TPMT
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
ASE33709
UniProt:
A0AAI8DGV8
LinkDB
All DBs
Position
709317..710690
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AA seq
457 aa
AA seq
DB search
MAGVVNKNEIYTGEVIDFTHEGHGVVKFDRYPIFVPNAIKDETISFKVIKVKKQFAIGKL
ISIEEASKDRIEPPCEYYKVCGGCQLQHLSYTAQLEMKKEQVINLFKRKSHFEDTIIHDT
VGMENPWHYRNKSQIPVGKNKSGEIELGFYRQRSHDIVNIDHCMIQDEKHDLIMKKLKRL
LDETNISIYNEQKHKGELRHIILRTGYYTGETMVIFVTNSKQLSHKNKIIDFIQTEFENV
VSIKHNINLEKSNVIMGHTSYTLYGKDTITDKLSEYEFKISDTSFYQINPTQTEKLYHKA
LEYAQLDGEETVIDAYCGIGTIGSYMSQKAKHVYGVEVVEQAIENAKENAQINHIDNATW
EAGKAEEIILKWQQEGIKPEVVMVDPPRKGCDQTFIETLIELSPKRIVYISCNPATQVRD
VELLKNSGYQLKEITPVDMFPHTTHVETVALIEKITE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagtcgtaaataagaatgaaatatatactggagaggttatcgattttacacat
gaagggcatggtgtagttaaattcgatcgttatccaattttcgtaccaaatgcaattaaa
gatgaaaccatttcatttaaagttatcaaagtgaaaaaacaatttgctattggtaagtta
atctccattgaagaagcatcaaaggacagaattgaaccaccttgtgaatattataaagtt
tgtggtggatgtcaacttcaacatttaagctacacagcgcaattagaaatgaaaaaagaa
caagtgattaatctattcaagagaaaatcacattttgaagatacaattattcacgataca
gttggaatggagaatccttggcattatcgtaataaatcacaaataccagtcgggaaaaat
aaatctggtgaaattgaactaggattctatagacaaagaagtcacgatatcgtgaatata
gatcattgtatgattcaagatgaaaaacatgatttaattatgaagaaacttaaacgactt
ttagatgaaacaaacatcagtatttataatgaacaaaagcacaaaggtgaattaagacat
atcatcttgagaactggttattatactggagaaacaatggttatattcgtaacgaatagt
aaacaacttagccataaaaataaaataattgattttattcaaactgaatttgaaaatgtg
gtcagcattaaacataatattaatctagaaaaatcaaatgttattatgggacatacgtca
tatactttatacgggaaagataccattacagataaactttctgaatacgaatttaaaata
tccgacacttctttctatcaaatcaacccaacacaaacagaaaagctttatcataaagcg
ctagaatatgcacaattagatggagaagaaactgtcattgatgcatattgtggtattggg
acaatcggttcatacatgtcacaaaaagcgaaacacgtttatggtgtggaagtcgtcgaa
caagcaatagaaaacgcaaaagaaaatgcgcaaatcaaccatatagataatgcgacatgg
gaagcaggaaaagcagaagaaatcatcttaaaatggcaacaagaaggtattaagccagaa
gttgtaatggtcgatccaccaagaaaaggatgcgatcaaacatttatagaaactttaatc
gaattatcaccaaaaagaatcgtatatatttcatgtaacccagcaacacaagttagagat
gtagaattgttgaaaaatagcggttatcaactaaaagaaatcacaccagtagatatgttt
ccacatacaacacacgtcgaaacagttgctttaatcgaaaaaataacagaataa
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