Mammaliicoccus sciuri: CEP64_03690
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Entry
CEP64_03690 CDS
T05176
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
sscu
Mammaliicoccus sciuri
Brite
KEGG Orthology (KO) [BR:
sscu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sscu03009
]
CEP64_03690
Enzymes [BR:
sscu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CEP64_03690
Ribosome biogenesis [BR:
sscu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CEP64_03690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_15
Cons_hypoth95
Methyltransf_25
MTS
PrmA
UPF0020
Methyltransf_11
N6_N4_Mtase
Methyltransf_4
TRM5-TYW2_MTfase
MethyltransfD12
Ubie_methyltran
PCMT
HVO_0513_N
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
ASE33733
UniProt:
A0AAI8GT86
LinkDB
All DBs
Position
728993..730354
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AA seq
453 aa
AA seq
DB search
MNVSVKVGQKFPLTIKRLGINGEGIGYYKKKITFVEGLLPGEVGLVQVVKAKPNFIEAKV
VKIRERSKERVKPKCKVYDICGGCQLQHLNYDAQLLFKSQIVKDALTKYAKNIPTKIVKP
TIGMDNPWGYRNKNQFPVQKKGNQLIAGLYEKDSHQLIDIKKCPVQDKRTIQVTNELRNI
LMNLQVKVCRNPNKEQGLRYIVTRVAKHSQQIQVTLVCTDDQLKYNQSLIDQIMNLSFVE
SLSININKEKTSRVLGNQTIHVSGKQQITETLGQYYYDLSPDSFFQLNPEQATKMYGEIE
THANLTGNESVVDAFCGTGTIGIWISQNAKEVRGMDIIKEGIDDAKKNAELNNRHNVHYE
VGDAYKVMDKWIKEGFKPDVITVDPPRTGLGIKAVELIKSVHPKTFVYTSCNPSTLAKDL
AHLSKKYKVVSMQPIDMFPQTAQVEVVAKLVAK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtttcagtaaaagtaggacagaagtttcctttaacgatcaaacgattaggtatt
aatggtgaaggtattggctattataagaagaagataacatttgtagaaggtttattgccg
ggagaagttggacttgtccaagtagtaaaggcgaaaccaaattttatcgaagcgaaagta
gtcaaaatccgtgaacgtagtaaagaaagggttaaacctaaatgtaaagtttatgatatt
tgtggtggatgccaactgcaacatttaaattatgatgcgcaacttttattcaaatcacaa
attgtaaaagatgcgttaactaaatatgcaaaaaatattccaacaaaaattgtaaaacct
acaatcggtatggataatccttggggataccgtaataaaaatcaatttcctgttcagaag
aaaggaaatcaactcattgcaggcctttatgaaaaagacagtcatcaattaattgatatt
aaaaaatgtccagttcaagataaacgtacgattcaagttacgaatgaattgagaaatatt
ttgatgaatttacaagttaaagtatgtagaaatccaaataaagaacaagggctaagatat
attgttacgagagtggcaaagcatagtcaacaaatacaagttacgttagtttgtacggac
gatcaattgaaatataatcagtctcttattgatcaaatcatgaatttgtctttcgtggaa
agtttatccatcaatattaataaagagaagacatcacgagtacttggaaatcaaacgatt
catgtaagtggtaaacaacaaattacagaaacgcttggtcaatactattatgatttatcg
ccagattcattttttcaattaaatccagaacaagctacaaaaatgtacggtgaaattgaa
actcatgcgaatttaacaggaaatgaatcagttgtagatgcattttgtggaacaggtaca
attggtatttggatttctcaaaatgcgaaagaagtgagaggtatggatattattaaagaa
ggtattgatgacgctaagaaaaatgctgaactcaataatcgtcataatgtacactatgaa
gttggtgatgcatataaagttatggataaatggattaaagaaggctttaaaccagacgtg
ataacagttgatccgccaagaactggattaggtattaaagctgttgaacttatcaaatcc
gttcatccaaaaacatttgtgtatacaagttgtaatccatcaactttagctaaagattta
gcacacttatctaaaaaatataaagtcgtaagcatgcaacctattgatatgtttccacaa
acagcacaagtagaagtcgtagcaaaattagttgcaaaataa
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