Mammaliicoccus sciuri: CEP64_05450
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Entry
CEP64_05450 CDS
T05176
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
sscu
Mammaliicoccus sciuri
Pathway
sscu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sscu00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CEP64_05450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sscu03021
]
CEP64_05450
Transcription machinery [BR:
sscu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CEP64_05450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
tify
Motif
Other DBs
NCBI-ProteinID:
ASE34038
UniProt:
A0AAI8DIF6
LinkDB
All DBs
Position
1069505..1070614
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AA seq
369 aa
AA seq
DB search
MSDKELNKINSANNEEVLTIEQVKHQLIEQGKKAGHLSHEEIADKLQNFEMDPDQMDDFF
DLINENEINLINEKDSSDTNDKLNLNDLSAPPGVKINDPVRMYLKEIGRVNLLTAQEEIE
LAKRIEQGDEIAKSRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDFNK
GFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRDPSPEEI
GEEMDLPPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDAQSPSDHAAYELLKEQ
LEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSR
SKRLKDFMD
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataaagaattaaacaaaattaatagcgctaataatgaagaagtgcttacaatt
gaacaagttaagcaccaattaattgaacaaggtaaaaaagcaggacatttgagtcacgaa
gaaattgcagataaattgcaaaacttcgaaatggatccagatcaaatggatgatttcttt
gatttaattaatgagaatgaaatcaatcttattaatgaaaaagattcaagtgatacaaat
gacaaactaaatttaaatgacttaagtgctcctccaggtgttaaaataaacgacccagta
agaatgtacttaaaagaaataggacgcgtcaatttattaactgcccaagaagaaatcgaa
ttagctaaacgtatcgagcaaggtgatgaaattgcgaaatcacgtcttgcagaagcgaac
ttaagacttgtcgtaagtatcgctaaacgttatgtaggtagaggtatgttattccttgac
cttattcaagaaggtaatatgggtctaattaaagccgtagaaaaattcgactttaataaa
ggtttcaaattctcaacatatgcaacttggtggattcgtcaagcaatcactagagcgatt
gctgaccaagcacgtacaatccgtatcccagttcatatggttgaaacaatcaataagttg
attcgtgttcaacgtcaattacttcaagatttaggcagagatccatctcctgaagaaatt
ggtgaagaaatggacttaccacctgaaaaagtacgtgaaattcttaaaattgctcaagaa
cccgtatcattagaaacgcctattggtgaagaagatgacagtcacttaggcgactttatt
gaagatcaagatgcacaaagcccatcagatcacgctgcatatgaattacttaaagaacaa
ttagaagatgtattagacacattaacagatagagaagaaaatgtattaagactaagattt
ggtcttgatgatggtagaacaagaacacttgaagaagtcggaaaagtatttggtgttact
agagaacgtattcgtcaaatagaagcgaaggcattacgcaagttaagacatccatctaga
agtaagcgtttgaaagattttatggattaa
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