Mammaliicoccus sciuri: CEP64_11565
Help
Entry
CEP64_11565 CDS
T05176
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sscu
Mammaliicoccus sciuri
Pathway
sscu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sscu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CEP64_11565 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sscu03021
]
CEP64_11565 (rpoC)
03400 DNA repair and recombination proteins [BR:
sscu03400
]
CEP64_11565 (rpoC)
Enzymes [BR:
sscu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CEP64_11565 (rpoC)
Transcription machinery [BR:
sscu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CEP64_11565 (rpoC)
DNA repair and recombination proteins [BR:
sscu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CEP64_11565 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
ASE35216
UniProt:
A0AAI8GUS4
LinkDB
All DBs
Position
complement(2314830..2318447)
Genome browser
AA seq
1205 aa
AA seq
DB search
MIDVNNFHYMKIGLASPEKIRSWSFGEVKKPETINYRTLKPERDGLFCEKIFGPTKDWEC
SCGKYKRVRYKGMVCDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLLLDM
SPRSLEEVIYFASYTVIDPGPTGLEKKQLLTEGEFREYYDKYPGKFTAKMGAEAIRDLLS
DIDLDKELKELREELESATGQRLTRAIKRLEVVESFRHSGNDPSWMILDVLPIIPPEIRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPGIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFIMKELVEREIATNIKNAKGKIERMEEEVWDVLEDVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVTTAYNADFDGDQMAVHVPLSKEAQAEARMLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERKGATGAGEIFSETDEVIKAYVNGYVHLHSRIAVH
ARSLKNPTFTEEQNNKLLITSVGKIIFNEIMPDSFPYINEPTNFNLEKSTPDKYFIAPTD
IPEGGLIEYLQDVELVKPFNKKFLGQIIAEIFNKFHITDTSVMLDKMKDLGFKYSSKAGI
TVGVSDIVVLPDKQEIIGEAEIKVDKVQKQFTRGLITESERYAAVIEIWTKAKDDIQAKL
MMSLDSLNPIFMMSDSGARGNASNFTQLAGMRGLMANPSGRIIELPIKSSFREGLTVLEY
FISTHGARKGLADTALKTADSGYLTRRLVDVAQDVIVREEDCGTDRGLLVSDIREGSELI
EPFIERIEGRYSKETLRHPETDEVIIKVNELITADIAKQIVDAGITEMHIRSAFTCNTRH
GVCEKCYGKNLATGEQVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGADITQGLPRI
QELFEARNPKGQAVISEINGEVTEITIVKDRQQEIKVKGENEIRTYNAPGTARLKVEEGQ
YVERGEVMTEGSIEPKGLLAVAGLNATQKYLLKEVQKVYRMQGVEISDKHVEVMVRQMLR
KVRIIEAGDTKLLPGALVDIHTFTDANREVFATRKRPATAKPVLLGITKASLETESFLSA
ASFQETTRVLTDAAIKGKRDDLLGLKENVIIGKLIPAGTGMRRYTGVDFEKVEKEVVPEE
QVVTD
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
ttgattgatgtaaataatttccattacatgaaaataggacttgcttcacctgaaaagatc
cgttcttggtcatttggtgaagtgaaaaaaccagaaacaattaactaccgtacgttaaaa
cctgaaagagatggtttattctgtgagaaaatttttggtccaactaaggactgggaatgt
agttgtggtaaatataaaagagtacgctataaaggcatggtctgtgaccgttgtggtgta
gaggttactaagtcaaaagtgcgtcgtgaaagaatggggcatattgaattagcagcacca
gtttcacacatttggtacttcaaaggtatcccaagtcgtatgggacttttacttgatatg
tcaccacgttcacttgaagaagttatatactttgcttcttacactgtaattgatccaggt
ccaactggattagagaagaaacaattattaactgaaggtgaattccgtgagtattatgat
aaatatccaggtaaattcacagcaaaaatgggtgcagaagcaatccgtgacttattaagc
gatatcgatttagataaagaattaaaagaattacgtgaagaattagaatcagcaacagga
caaagattgacaagagcaattaaacgtctagaagttgttgagtcattccgtcactcaggt
aatgacccatcttggatgatcttagatgtattaccaattattccacctgaaattcgtcca
atggttcaattagacggtggacgtttcgcaacaagtgatttaaatgatttataccgtcgt
gttatcaaccgtaataatcgtttgaaacgtttattagatttaggtgcacctggtattatc
gttcaaaatgaaaaacgtatgttacaagaagctgtagatgctttaattgataatggtcgt
cgtggtcgtccagttactggaccaggtaaccgtccattaaaatcattgtcacatatgtta
aaaggtaaacaaggtcgtttccgtcaaaacttacttggtaaacgtgttgactattcaggt
cgttcagttatcgtagttggaccaaaccttaaaatgtatcaatgtggtttaccgaaagaa
atggcgttagaattgttcaaacctttcattatgaaagaacttgttgaacgcgaaattgca
acgaacatcaagaacgcaaaaggtaaaatagaaagaatggaagaagaagtttgggatgta
ctagaagatgttattaaagaacatccagtactattaaaccgtgcaccaacgcttcaccgt
ttaggtattcaagcatttgaacctacactagttgaaggtcgtgcaatcagacttcatcca
cttgtaacaactgcttataacgctgactttgatggtgaccaaatggctgtccatgttcca
ttatcaaaagaagcacaagcagaagcacgtatgttaatgcttgcagctcaaaacatcttg
aaccctaaagatggtaaaccagtcgtaacaccttctcaagatatggtattaggtaactat
tacttaacacttgaacgtaaaggcgctacaggagctggtgaaatctttagtgaaacagat
gaagttattaaagcgtatgtaaatggctatgttcatttacactcacgtatagctgttcat
gcaagatcattaaagaacccaacatttacagaagaacaaaacaataaattacttatcaca
tctgttggtaagattatattcaatgaaattatgccggattcattcccgtacattaatgaa
ccaacgaatttcaacttagaaaaatcaacacctgacaaatactttattgcacctactgat
attccagaaggtggattaatcgagtacttacaagatgttgaacttgttaaaccatttaac
aagaaattcttaggtcaaatcattgcggaaatctttaataaattccacattacagataca
tcagtaatgcttgataagatgaaagatttaggatttaaatactcatctaaagctggtatt
acagttggggtttctgacatcgtggtacttcctgataaacaagaaattattggagaagca
gaaatcaaagtagataaagtacaaaaacaatttacccgtggtttaattactgaaagcgaa
cgttatgctgctgtaattgaaatttggacaaaagctaaagatgatattcaagctaaatta
atgatgtcattagacagcttaaacccaatcttcatgatgagtgactctggtgcccgtggt
aacgcatcaaacttcactcaattagctggtatgcgtggtctgatggctaacccatctggt
cgaattatcgagttacctattaaatcttcattccgtgaaggtttaacagtacttgaatac
ttcatctctactcacggtgcgcgtaaaggtcttgccgatacagcactgaaaactgccgat
tcaggctacttaacacgtcgtctagttgacgtagcacaagatgttatcgttagagaagaa
gactgtggaactgaccgtggattacttgtttcagatattagagaaggatcagagttaatc
gaaccattcattgaacgtattgaaggtcgttactctaaagaaacattacgtcatcctgaa
acagatgaagtaattattaaagttaatgaattaataactgctgatattgctaaacaaata
gttgatgcaggtattactgaaatgcatattcgctctgcatttacatgtaacactcgtcac
ggtgtatgtgaaaaatgttatggtaagaacttagcaactggtgaacaagttgaagttggt
gaagcagttggtacaattgctgcacaatcaatcggtgaaccaggtactcagcttacaatg
cgtacattccatacaggtggtgtagcaggtgccgatatcactcaaggtttacctcgtatt
caagagctatttgaagcacgtaaccctaaagggcaagctgttatttctgaaattaatggt
gaagtaactgaaattacgatcgttaaagatcgtcaacaagaaattaaagttaaaggcgaa
aatgaaatccgtacttataacgcgccaggtactgctcgacttaaagttgaagaaggtcaa
tacgtagaacgtggtgaagttatgactgaaggttcaatcgaacctaaaggattactagct
gttgcaggcttaaatgctactcaaaaatacttacttaaagaagtacaaaaagtttaccgt
atgcaaggtgttgaaatttcagataaacacgttgaagttatggttagacaaatgcttcgt
aaagtaagaattattgaagcaggagatactaaattattaccaggtgcattagttgatatt
catacatttactgatgcaaacagagaagtatttgcgacgcgtaaacgtccagcaactgct
aaacctgtattacttggtattacgaaagcatctcttgagactgaaagtttcttatcagct
gcttcattccaagaaacaacaagagtacttacagatgctgctattaaaggtaagcgtgat
gacttacttggacttaaagaaaatgttatcatcggtaaattgatccctgccggaacaggc
atgagaagatatactggtgttgactttgaaaaagttgaaaaagaagtagtacctgaagaa
caagttgtgactgactaa
DBGET
integrated database retrieval system
