Syngnathus scovelli (Gulf pipefish): 125965831
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Entry
125965831 CDS
T08785
Symbol
si:ch211-225b11.1
Name
(RefSeq) sodium- and chloride-dependent GABA transporter ine isoform X1
KO
K05039
solute carrier family 6 (neurotransmitter transporter, taurine) member 6
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sscv02000
]
125965831 (si:ch211-225b11.1)
Transporters [BR:
sscv02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
125965831 (si:ch211-225b11.1)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
125965831
NCBI-ProteinID:
XP_049572628
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Position
3:16440869..16454997
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AA seq
589 aa
AA seq
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MSDEKTRALLTSDVQVTSGETDVARPTWSGRLEFILATVGYAVGLGNVWRFPYLCYSSGG
GAFLIPYFIMLFLCGIPLLLMEFVIGQFTHLGPVHALAKICPLLKGVGLATVVISYIFCT
YYNVLMSWALFYLFHSFGAPPPWRTCNNSWNVFENCSSGFPGNATDLQSASQQFFDHRLL
EKTSGIENVGGFQWELFGYLLLAWVIVYLCIFKGVKSTGKVVYFTATFPYFILFALLINN
MQLPGAKEGVQFFVTPVWRKLFEVKVWVHAAAQVFNSLGIAFGSMISMASYNKFNNNIVR
DALIVSFINSFTSILAGFVIFSAIGYMAHIHNLPVDNISTDGPGLVFVVYPEALSTMPAF
QLWAPLFFFMLLCLGLDSQFATVEVALTFIKDEFRAQILQVFKREELLALVICVVSFLLG
LPHVTKGGIYVFQLMDHYTAVVSLMFLAFFEVIAVCCFFGVHRISYMMEKMLGKSANIYF
RICWMFICPLLVLCILVSSIIQYVPVQYGTYRYPLWADWVGWCVSLLSLIWIPIGAIHEI
CNNKGSFLSRLKTALTSTVELVVEDSLPEKQNLGNPVAETSADLLNTTL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgagaaaacgagagctttgttaacctcagatgttcaagtgacctccggagag
acagatgtagcgagaccgacatggagcgggcgactggagttcattctggccacggtgggt
tacgcggtcgggcttggcaatgtctggaggttcccctacctgtgctacagcagcggcgga
ggagcttttttgatcccctatttcatcatgttattcttgtgtggcatccctctgcttctc
atggagtttgttattggccagttcactcatctcgggccagtgcacgccctagccaaaatc
tgtcctctcttaaaaggtgttggccttgccacagtggttatatcctacatcttctgcacc
tactacaatgtgctcatgagctgggcccttttctatttgttccactcctttggagcacca
cctccctggaggacttgcaacaacagctggaatgtctttgagaactgttccagtggattt
cccggcaatgccactgatctgcagtcagcgagccaacagttctttgatcatcggcttctg
gagaaaaccagcggcattgaaaatgttggtggttttcagtgggaactcttcgggtatctt
ctacttgcctgggtcattgtctatttatgcatctttaaaggagtcaagtcaacaggcaag
gttgtttatttcacagctacgtttccgtacttcatcttgtttgccctgctcattaacaat
atgcagctacctggtgccaaggagggtgtccagttctttgtgactcctgtctggcgaaaa
ctttttgaagtgaaggtatgggttcacgcagcagcccaagtattcaattcactgggaatt
gcttttggttcaatgatttccatggcaagttacaacaagttcaacaacaacattgtcaga
gatgctttgattgtatcgttcatcaactcattcacaagtattctggctggctttgtgatc
ttctcagctattggctacatggcacacatacataatctccccgtggacaacatatcaaca
gatggtcctggtctagtgtttgttgtttaccctgaagccctctccactatgcccgccttt
cagctgtgggctcctctcttcttcttcatgctgctctgtcttggtctggacagtcagttt
gccacagttgaggtggctttgacattcatcaaagatgaatttagagcccaaattttgcaa
gttttcaagagggaagagctgctcgccctggtcatctgtgttgtcagttttcttcttgga
cttccacacgtcactaagggaggtatttatgtatttcaactgatggaccactacactgct
gtggtgtccctcatgttcttggctttctttgaggttatagcagtctgctgtttttttggg
gtccaccgcatctcatatatgatggagaagatgctaggaaaatctgcgaacatctacttt
cgcatttgctggatgtttatctgtcctctgctggtgctgtgcatcctggtctccagtatc
atccagtacgttcctgttcaatatgggacgtaccgttacccattgtgggctgactgggtg
ggttggtgcgtctcactgctctctctgatatggattcccattggagccattcacgagatc
tgtaacaacaaaggctcttttctctcgagattgaaaacagctctaactagcacagtcgag
ctggttgttgaggattctctgcctgaaaaacaaaaccttggcaacccagtggctgaaaca
tcagcagaccttctcaacacaacactttga
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