Syngnathus scovelli (Gulf pipefish): 125965837
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Entry
125965837 CDS
T08785
Symbol
fancc
Name
(RefSeq) Fanconi anemia group C protein isoform X1
KO
K10890
fanconi anemia group C protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
125965837 (fancc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125965837 (fancc)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
125965837 (fancc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fanconi_C
Arg_decarb_HB
Motif
Other DBs
NCBI-GeneID:
125965837
NCBI-ProteinID:
XP_049572641
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Position
3:complement(18819887..18838072)
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AA seq
595 aa
AA seq
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MSQSVVRVQQTEMQLWLDKVEAWGQADSVDVHKDACAHLCSLRDFLQRLLMHIDNMGSTT
ETMKKMPLLGQIVGRLCWNPVVTADVKSSGLIFQCLWALYSEQPANALERKANQWIQKLL
CQLATEDDESLANSLLQHLHVSPTQYRLQVLRKVVAELQKDIGKSCSSLGDRNERCSCDR
MVATCEACVPLVTCPEVAPLIGTLLQRSLTCAQATLPYDFLDALSSAYNSGRLSLEDRAV
VALWYHSLPSLEETVLGLLESTVFADAPPSPQQLKRQIAQSLLPKACAQHCSIFLVVNDI
FRSILKKQEDHPCIRDLIQSFTSCFYRELTVLPTQTSLKAFFPHSPPNLLLPLLTQPPEA
SGEARTRHLNWLSNSLRRLTEEAEADSGGSGGGGVGVVFEAWFLLVQCSHWVHEAFQLLA
TAEPRDCHPSLWLLTFYHHPTNRGHQRNQRLVRVQQIWEQMRILFSDDHLDPGEQLRDAL
AVISASTGRPSPLLTLGLALNCAVFSRRSHGVSARIVCTVAAASGPLSEALRVLSLLERR
LGTGSGDGPSSGDPCATSVRIRQLQNALAIPTPPPPPQQLDVTHAGYAHLSHSPS
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaatcagtggtccgagtccagcaaacagagatgcagttgtggctggacaaagtt
gaggcttggggccaagccgacagcgtggacgttcacaaagatgcatgcgctcatctgtgt
tcactgagggatttcctccagcgacttctcatgcacattgacaacatgggttccacaaca
gagactatgaagaagatgcctttgcttggccagattgtaggtcgcttgtgctggaacccc
gttgtcactgctgacgttaaaagcagtgggctgatcttccagtgtctgtgggcgctatac
tctgagcagccggccaatgctttggaaagaaaggctaaccagtggatacagaaactgttg
tgtcaacttgccaccgaagacgacgaatcactagccaattctttgctccaacatttacat
gtgtcgccaactcaataccgcctccaagtcctcagaaaggtggtggcagagttgcagaaa
gacattggaaaaagctgcagttcactgggagacagaaatgagaggtgttcctgtgatagg
atggtggcaacatgcgaggcttgcgttcccctggttacctgccccgaggttgctcctctc
attggaactttgctgcagcggtcactaacatgtgcacaagcaactctcccgtatgacttc
ctggatgctctaagctctgcctacaacagtggtcgcttgtcactggaggaccgggctgtc
gtggccctgtggtatcacagcctgcccagcctggaggagacggtgctcggtctgctggag
tccaccgtcttcgctgacgcgccgccgtcaccgcaacagctcaagcggcaaatagcgcag
tcgctgctgcccaaggcctgtgctcaacactgctccatcttcttggtggtgaatgacatc
tttcggtccatcctcaagaaacaagaggatcacccgtgcattcgggatctcatccaaagc
tttaccagctgcttctatagggaactgacagtgttgcctacacagacatctttgaaggcc
ttcttccctcattctcccccaaatctgctgcttccgctcttgacccagccgccagaggcg
tctggggaggctcgcacacgtcacctgaactggctcagcaactcattacgcagactgaca
gaggaagcggaggcagacagcggcggcagcggcggtggtggtgttggcgtagtgtttgag
gcctggttcctgctggtccagtgttctcattgggtccacgaggccttccagttgctggcc
accgccgagccccgagactgccacccctcgctgtggctcctgaccttctaccaccaccct
accaacagggggcaccaaaggaatcaacgactggtacgtgtgcaacaaatctgggagcag
atgcgcatccttttctcagatgatcatctcgaccccggggagcaactccgcgatgcgctg
gccgtcatttccgcgagcactggacggccatcgccgttactgaccctcggcctggcgctc
aactgtgccgttttctcccgccggtcgcacggcgtctctgctcgtatcgtgtgcacggtg
gcggctgcgtccggtccgctcagtgaagcattacgagtcctgagcctgctggagcgtcgg
ctcggcacgggaagcggcgacggcccctcatccggtgacccctgcgcgacctctgtcagg
atccgtcagcttcaaaacgcgctcgccatccctacaccaccaccaccaccacagcaactg
gatgtcactcatgcgggatacgcccacctctcacattcacccagttag
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