Syngnathus scovelli (Gulf pipefish): 125965842
Help
Entry
125965842 CDS
T08785
Name
(RefSeq) sarcoplasmic/endoplasmic reticulum calcium ATPase 2
KO
K05853
P-type Ca2+ transporter type 2A [EC:
7.2.2.10
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04020
Calcium signaling pathway
sscv04148
Efferocytosis
sscv04260
Cardiac muscle contraction
sscv04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
125965842
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125965842
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
125965842
04261 Adrenergic signaling in cardiomyocytes
125965842
Enzymes [BR:
sscv01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.2 Linked to the hydrolysis of a nucleoside triphosphate
7.2.2.10 P-type Ca2+ transporter
125965842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cation_ATPase
Cation_ATPase_C
E1-E2_ATPase
Cation_ATPase_N
Hydrolase
Hydrolase_3
HAD
DUF4833
Motif
Other DBs
NCBI-GeneID:
125965842
NCBI-ProteinID:
XP_049572646
LinkDB
All DBs
Position
3:complement(11578379..11598500)
Genome browser
AA seq
1044 aa
AA seq
DB search
MENAHTKSVEEVYSYFCVNESTGLSLDEVKRQREKWGPNELPAEEGKSLWELVLEQFEDL
LVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAEDAIEALK
EYEPEMGKVYRQDRKTVQRIKARDIVPGDIVEVAVGDKVPADIRISSIKSTTLRVDQSIL
TGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNIAAGKAVGVVVASGVNTEIGKIRDEMA
ATEQEKTPLQQKLDEFGEQLSKVISLICIAVWIINIGHFNDPVHGGSWIRGAVYYFKIAV
ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ
MSVCRMFIINKAEGESCSLSEFTITGSTYAPEGEVYQEGKQVKSSQYDALVELATICALC
NDSSLDFNEVKGVYEKVGEATETALTCLVEKMNVFDTQIHNLSKIDKANACNSVIKQLMK
KECTLEFSRDRKSMSVYCTPNKSRSSLGKMFVKGAPEGVIERCTHVRVGNSKVPLNKAIK
EKIMSVIREYGTGRDTLRCLALATRDSPPKMDDMILSEPSKFSEYESDLTFVGCVGMLDP
PRQEVAASIKLCRQAGIRVIMITGDNKGTAVAICRRIGIFSEDDDVEQMAFTGREFDDLE
PSKQREAVTHARCFARVEPSHKSKIVEFLQGFDEITAMTGDGVNDAPALKKAEIGIAMGS
GTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALG
FPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMEKLPRNAKEPLISGWLFFRYLAIGG
YVGAATVGAAAWWFTLSEDGPQVTLYQLSHFLQCTPDNPDFDNLDCEVFESPYPMTMALS
VLVTIEMCNALNSLSENQSLLRMPPWENIWLLGAICLSMSLHFLILYVEPLPVIFQITPL
DATQWLMVLKISVPVILLDELLKFTARHHLDLGKQLEKPVAGHKGRRALSACAEGISWPF
VAISLPLVLWIYSTDTNVAAVLWP
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgctcacaccaagagtgtggaggaagtttacagttatttctgcgtcaatgag
agcacaggactctctctggacgaagtgaaacgacagcgagagaaatggggcccgaacgaa
ttaccagcagaagaagggaaatctttatgggagcttgtccttgaacagtttgaagactta
ctcgtacgaattcttctgctggctgcctgtatttcttttgtcctggcctggtttgaggag
ggggaagaaactattactgcctttgtggaaccttttgtaattttactcattctcattgcc
aatgccatcgtcggggtgtggcaggaacgtaatgcagaggatgccattgaggcgctgaag
gagtatgagcctgagatggggaaagtgtaccggcaggacagaaagacagtccagaggatc
aaggccagagacattgttcctggagatattgtggaagttgctgttggagacaaagtgcct
gctgatatacgtataagttcaatcaaatcaacaactttgagagtggaccagtccattcta
actggagagtctgtttctgtcatcaaacatacagaccccgtgcctgacccacgtgctgtc
aatcaagacaagaagaacatgttattctctggtaccaacattgctgccgggaaggccgtg
ggtgtggtggtggcctcaggtgttaatacagagatcggtaagatccgtgacgagatggca
gctactgagcaggagaagacacccctgcaacagaagctggatgagtttggtgaacagctt
tccaaggtcatttccctcatctgtattgcggtgtggattatcaacatcggccatttcaat
gaccctgtgcacggaggctcttggatccgcggagctgtctactacttcaagattgcggtg
gcactagccgtggccgccatccccgaaggtttgcctgctgtcattaccacgtgtttggct
ctgggcacccgccgcatggccaagaagaatgccatcgtccgcagcttgccatctgtggaa
actctgggctgcacctctgtcatttgttctgacaagacaggaactctgaccaccaatcag
atgtctgtctgcagaatgttcattatcaacaaagccgaaggtgagagctgctctctatct
gagtttaccatcacaggttctacttatgcaccagagggggaagtataccaggaaggtaaa
caagtgaaatcctctcagtatgatgctctggtggaactggccaccatctgtgccctgtgt
aatgactcgtcgctggacttcaatgaggtgaaaggcgtgtatgaaaaggtcggcgaagca
acagagactgcattgacctgtttggttgaaaagatgaacgtctttgacactcaaatccac
aacctgtccaagattgacaaggctaacgcctgtaactcagtgatcaaacaactgatgaag
aaagagtgcactctggagttctctagagacaggaagtccatgtctgtttactgcaccccc
aataagtcccgttcttccttgggaaaaatgtttgttaagggagcaccagagggcgttatc
gagagatgcacccatgtcagagtgggtaacagcaaggttccgttaaacaaagccatcaag
gaaaagattatgtctgtgattcgtgaatacgggaccggtcgggacacgctgagatgtctg
gctttggccacacgagacagcccgcccaagatggacgacatgatattgtccgagccctcc
aaattctccgaatatgagtcggacctgacctttgtgggctgcgtcggcatgctggaccct
ccaagacaagaggtggcggcgtccatcaagctgtgccgccaggctggcatccgcgtcatc
atgatcactggggacaataagggcacagccgtggctatctgccggcggatcggcatcttc
tccgaggatgacgacgtggagcagatggccttcaccggacgagagtttgacgacctggag
cccagcaaacagcgtgaggccgtcacccacgcgcgctgctttgcacgtgtggagccttca
cacaagtccaagatcgtcgagttcctgcaaggatttgatgagatcacagctatgactgga
gatggtgtgaacgatgcccctgccttaaagaaggcggagataggcatcgccatgggctct
ggcactgccgtggccaagtcagcctctgaaatggtcctagccgacgacaacttctcttct
attgtggctgctgttgaggaaggccgcgccatctacaacaacatgaagcagttcatcaga
tacctgatatcctccaatgtaggagaggtcgtctgtatcttccttactgcagcactgggc
tttcccgaggcactgatcccagttcagttactgtgggtcaacctggtgaccgacggtctc
cccgcgaccgccctcggcttcaaccctccggacctcgacatcatggagaagcttccccgc
aatgctaaagagccactcatttctggatggctcttcttccgatatctggccattggcggc
tacgttggcgccgccacggtgggagccgcggcttggtggtttacgctctcggaagatgga
cctcaggtcacgctgtaccagctgagtcacttcctccagtgcaccccagacaacccggac
tttgacaacctggactgcgaggtgtttgagtcgccctaccccatgaccatggcactctct
gtccttgtcaccatcgagatgtgcaacgctctcaatagtctttcagagaaccagtccctg
ctgcggatgcccccttgggaaaacatttggctactgggggctatctgcctctctatgtct
ctacacttcctaatcctttatgtggaacctctgccagtcatcttccagatcacccctctg
gatgccacccagtggttgatggtgctgaagatctctgttccagtcattctgctggacgag
ctgttgaagtttacagccaggcaccacttggacttgggtaaacagttggagaaaccggtg
gcgggtcacaaagggcgacgcgctctttccgcatgcgccgagggcatctcgtggcccttt
gtggccatctcgctgcctctggtgctgtggatctacagtactgacactaacgtggctgcc
gtgttgtggccctga
DBGET
integrated database retrieval system
