Syngnathus scovelli (Gulf pipefish): 125965884
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Entry
125965884 CDS
T08785
Symbol
hnrnpk
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein K isoform X1
KO
K12886
heterogeneous nuclear ribonucleoprotein K
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125965884 (hnrnpk)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125965884 (hnrnpk)
Spliceosome [BR:
sscv03041
]
Common components
Common spliceosomal components
hnRNP proteins
125965884 (hnrnpk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
ROKNT
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
MOEP19
DJ-1_PfpI
Motif
Other DBs
NCBI-GeneID:
125965884
NCBI-ProteinID:
XP_049572719
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All DBs
Position
3:17830845..17843268
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AA seq
428 aa
AA seq
DB search
MDAKDEQQDDSSFSTETNGKRPAEDADQQKSFKRSRSSDEMIELRILLQSKNAGAVIGKA
GKNIKALRSDYNASVSVPDSSGPERILCICADIDTIGEILLKIIPTLEEYQQYNGMDFEC
DLRLLIHQSLAGSIIGVKGAKIKELREYTKTSIKLYQDCCPQSTDRVVLVGGKMERVVEC
IKTMLEVIAAAPIKGRSQPYDPNFYDETYEYGGFTMAFEERGSSSRRLMSNFPMRGSRPS
AGDRGYDRMSSSRSMRGPLPSSRRDYDDISPRRGPPPHHQSRNRGHTMSMGRSHRGGDDR
YYDSYRGSDERSNDRRGRPDRYSDNMSGGGYDNSSSWDSYQSGGRGSYNDPVITTQVTIP
KDLAGSIIGKGGQRIKQIRHDSGASIKIDEPLEGSEDRIITIVGTQDQIQNAQYLLQNSV
KQFSGQLL
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaaaagacgagcagcaagatgattcttcattcagcacagagacaaacggtaag
cgtcccgccgaggatgcagatcaacagaaatcgtttaagcgctccaggagctcggacgag
atgattgagctccgcattcttctgcaaagcaaaaatgcaggagctgtaatcgggaaagct
ggcaaaaacatcaaagcgctgcgttcagactacaatgccagtgtgtcagtcccagacagc
agtgggcccgagcgcatcctgtgcatctgcgctgacattgacaccatcggtgagatcctg
ctcaagatcatccccacgttggaggagtaccagcaatacaatggcatggattttgagtgt
gatctgcgtctgctgatccaccagagcctggctggctccatcattggggtgaagggagcc
aagattaaggagctcagagagtatacaaagaccagtatcaagctgtatcaggattgttgt
cctcagtcgaccgaccgcgtggtgctggtcggcggtaaaatggagcgcgtggttgagtgt
atcaagaccatgctggaggtcatcgctgccgctcctatcaagggccgttcacagccatac
gatcccaatttctacgacgaaacctacgaatatggagggttcaccatggcgtttgaggag
aggggcagcagcagccgccgactaatgagcaacttccccatgcgaggaagcaggccaagc
gccggtgaccgtggctacgatcgaatgtcctccagcaggtcgatgcggggaccactgccc
tcctctcgcagggattacgacgacattagcccccgacggggtcctcccccgcaccaccag
agcaggaaccgcggccacactatgtccatgggtcgctcacacagaggcggagatgatcgt
tactatgactcttaccgtggctcagatgaaaggtcaaatgacagaagaggtagaccggat
cgctacagcgacaacatgagtggaggaggatatgacaacagctcatcctgggatagctac
cagtcaggtggacggggctcctacaatgacccagtcatcaccacacaagtgaccatccct
aaagacctggcgggctccatcatcggcaagggcggccagcggatcaagcagatccgccat
gattccggcgcgtccatcaagatcgatgagcctctggagggctcagaggaccgcatcatt
actattgtgggcacccaggatcagatccagaatgcccagtaccttctacaaaacagtgtg
aagcagttctctggtcaattgctgtag
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