Syngnathus scovelli (Gulf pipefish): 125966102 Help Entry 125966102         CDS       T08785                                  Symbol dctn1a Name (RefSeq) dynactin subunit 1a isoform X1   KO K04648   dynactin 1 Organism sscv  Syngnathus scovelli (Gulf pipefish) Pathway sscv04814   Motor proteins sscv05132   Salmonella infection Brite KEGG Orthology (KO) [BR:sscv00001]  09140 Cellular Processes   09142 Cell motility    04814 Motor proteins     125966102 (dctn1a)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     125966102 (dctn1a)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sscv04131]     125966102 (dctn1a)    03036 Chromosome and associated proteins [BR:sscv03036]     125966102 (dctn1a)   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:sscv04812]     125966102 (dctn1a) Membrane trafficking [BR:sscv04131]  Endosome - Golgi transport   Rab GTPases and associated proteins    Rab associated proteins     125966102 (dctn1a) Chromosome and associated proteins [BR:sscv03036]  Eukaryotic type   Centrosome formation proteins    Microtubules and associated factors     Dynactin complex      125966102 (dctn1a) Cytoskeleton proteins [BR:sscv04812]  Eukaryotic cytoskeleton proteins   Microtubules    Tubulin-binding proteins     Dynactins      125966102 (dctn1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Dynactin CAP_GLY Motif Other DBs NCBI-GeneID:  125966102 NCBI-ProteinID:  XP_049572785 LinkDB All DBs Position 1:28096206..28104356 Genome browser AA seq 1225 aa AA seqDB search MSSGGTVESGKAPKIGSVVEVIGKGQRGTVAFIGATLFASGKWVGVILNEPKGKNDGTVQ GKRYFTCEENHGIFVRQTQIQVVDDGSSATSPDTPESGASRILRQKADIPEIPKTSKQAP VSAKKSSTRRSIKASRENLSSGDVSEVGLSPHQGAPLMPHVATSAPATPSKEEESLRGQV KDLEEKLETLKAKRTEDKAKLKELEKHKIQLEQLHEWKSKMQEQQAELQKNLKEAKREAR DAQEAKDRYMEEMSDTADAIEMATLDKEMAEERAESLQVEVETLKEKVEELSMDLEILRH DISEKGSDGAASSYHVKQLEEQNSKLKEALVRMRDLSASEKQEHVKLQKQMEKKNAEMET LRTQKEKLQEELKQAEVTVDELKEQVDAALGSEEMVETLTERNLDLEEKVRELRETVSDL EAINEMNDELQENARETEMELREQLDMSGAKVREADKRVEAAQETVADYQQTINKYRELT NRLQEANKELMMQQSESSEVQQPPAELFDFKIKFAETKAYAKAIEMELRKMEVAQLNREV ALLTSFMPDSFLRHGGDHDCILVLLLIPRIICKAELISKQAQEKFDLNGNLAQGSALKGP PGEQRSFASGLVYSLSLLQATLHKYEQALSMCSVEVFKRMGTLYSEMSFHERSLDYFIDL LHKDQLDETVQVEPLTKAIKYYQQLYSVHLAEHKEDCTVQLSDHIKFTQSALDCMGVEVA RLRGFLATGQQNSTLAVLLKDLDTSCSDIKQFCKKIRRRMPGTDAVGAPAALNFGPQVSE GLTECRRQLTRVVAVLQEVAAAGAQMSAPLTEQEGLNALKLEDTACQAVEQVYGSHALNG TECLRQSCSAIVATMNKMATAMQEGEYDADKPQAKSPPVELRAATVRAEMTDAEGLGVKL EDREAAIKEFKKSLKIKGEELSEANVRLSLLEKKLDTSTKDADERVEKIQTKLDKNLDLL KKKEKEFEETMDALQADIDQLEAEKAELKQRIHNQSKMTIEGLRGVPASGMASAVQGPAG AMSQSLAGPLQVVDSPLLQQQLEAQRLGIKRLKTENVRLKAEKMSAQLASLPPLCPAKLP QVTKESSVPPEGLNMGIYRRTDQLLATLLKLSAEVKVVDITGKTSVSASAQLLEQTTRLH NLSNALAKLKGEVAEHVVSNQPGAKAPSDFATFPVSSFVKAKGEKTDGTVFVGRVAIPCT RGQEQVHRLVLSQQQLQQVHRLLMV NT seq 3678 nt NT seq  +upstreamnt  +downstreamnt atgagcagcgggggaactgtggaaagtgggaaagctccaaagattggttctgtggtggaa gtgatcggaaaaggccagcgtggcactgtcgccttcattggagcgaccctgtttgcctct ggcaaatgggtgggtgtcatcctcaacgagcccaaaggcaagaacgacggcaccgtgcag gggaagcgctacttcacctgcgaggagaaccatggaatatttgtcagacagactcagatc caggtggtcgatgacggctccagtgcgacatctcccgacactcccgagtctggtgcctcc aggatcctcagacaaaaagcagatatcccagagattcccaaaacaagtaaacaggcaccc gtaagcgccaagaagtcctctacccgccgttctatcaaggcctctcgtgagaatctgtca tctggtgatgtcagcgaggtgggcctgtccccccaccagggtgctccactcatgcctcac gtcgcaacttctgctccagctactccgagtaaggaggaggaatcactgcggggtcaggtg aaggatctggaggagaagctggaaacgctgaaagccaagcgcacggaagacaaggccaaa ctgaaggagctggagaagcacaagatccaactggagcagctgcatgagtggaagagcaaa atgcaggagcagcaggccgagctacaaaaaaatctcaaagaagccaagagggaagcccgc gacgctcaagaggctaaggaccgctacatggaggagatgtccgacacagcggatgccatc gaaatggccactctggataaagagatggctgaagagcgtgcagagtcgctacaggtggag gtggaaacgctgaaggagaaagtggaggagttgtccatggacctggagatccttcgacac gacatttcagagaaaggctctgatggcgccgcctccagttaccatgtgaaacagctcgag gagcagaacagcaaactgaaggaggccttagtcaggatgcgcgacctgtctgcctctgag aaacaggagcacgtgaaactgcagaagcagatggagaagaagaacgccgagatggagacc ctgaggactcagaaggaaaaactgcaggaggagctcaagcaggccgaagtcacagtcgac gaactgaaagagcaggtggacgccgccctgggatctgaggagatggttgagactctaacg gagaggaacctcgacttagaagagaaagtcagggagctgagagaaaccgtcagcgatctg gaggccatcaatgaaatgaacgacgagctccaggagaacgccagggagacggaaatggag ctgagggagcagctagacatgagcggcgcaaaggtccgtgaggcggacaagagggtggaa gccgcccaggagacggtggccgattaccagcagaccatcaacaaatacagggagctcacc aacagactgcaggaggccaacaaagagctgatgatgcagcagagtgaaagtagcgaagtg caacagccgcccgcagagctgtttgacttcaagatcaagtttgcagagacaaaggcgtac gccaaggccatcgagatggaactgaggaaaatggaagtggctcagctcaaccgggaggtg gcgctgctcacctccttcatgccggactccttccttcgtcacggcggggaccacgactgc atactggtgctcctgctcatccccaggatcatttgcaaggctgagctgatcagcaaacaa gcgcaggagaagttcgatctgaacgggaacctggcccaaggcagcgctctcaaagggcct ccaggagaacaacgcagttttgcctctggactcgtgtactcgctgagtttgcttcaggcc accttgcacaaatatgaacaggctttgagtatgtgctcggtggaggttttcaagcgcatg ggcacgctctactcggaaatgagcttccatgagcgctctctggattatttcattgacctg ctgcacaaagaccagttggacgagactgttcaggtggaaccgctgaccaaggccatcaag tattaccagcaattgtacagtgttcatctggcagaacacaaagaggactgtaccgtgcag ctatctgaccacattaagtttactcaaagtgccctggactgtatgggagtggaggtggcc cgtctgcgtgggttcctcgcgacaggtcagcagaactccacgctggctgttctcctgaag gacttggacacgtcctgctcggacatcaagcagttttgcaaaaagatccgccgccgaatg cccggaaccgatgccgtcggggccccggccgctctcaattttggaccacaggtgtccgag gggctgaccgagtgcagacggcagctgacccgggtggtggcggtgcttcaagaggtggcg gcggccggagctcagatgtcagcgccgctgactgagcaggaaggactgaatgcgctcaaa ttggaggacacggcgtgtcaggccgtggagcaggtgtacggctctcacgcgctcaacggc accgagtgcctgcgtcagtcctgcagcgccatcgttgctactatgaacaagatggccacc gccatgcaggaaggagagtacgacgcggacaaaccacaggcaaagagtcctcccgtggaa ttgagagcagccacggtccgagccgagatgactgatgccgagggcctcggagtgaagcta gaggacagagaagcagccatcaaggagttcaagaagtccctcaagatcaagggagaagag ctgagtgaggccaatgtccgtctgagcctgctggagaagaagctggacacgtccaccaag gatgcggatgagcgtgtggagaagatccagaccaaattggacaagaacctagacttgctg aagaagaaggaaaaggaattcgaggagacaatggatgccctgcaagccgacatcgaccag ctggaagcggagaaagctgagctgaaacagcgcatccataatcaatccaagatgaccatc gagggcttgcgaggtgtgcctgcttccggaatggcttccgccgttcagggaccagcagga gctatgtcgcaatcgctggcaggaccattgcaagtggtggactctcctctcctccagcag cagcttgaagctcagagactgggcatcaagcgcctcaagacggaaaacgtcagacttaag gcagagaagatgagtgcccagctggcctcgctgcctccactgtgcccagccaaactgccc caagtgaccaaggagagctcggtgccaccagaaggactgaatatgggcatctaccgccgc acagaccagctgctggctacgcttctgaagctgagcgcagaagtcaaagtggtcgacatc accgggaagacgtcagtgagcgccagcgcccagctgctggagcagaccaccagactccac aacctcagcaacgctctagccaaactcaagggtgaagtcgctgaacacgttgtgtccaat caaccgggagcaaaagccccttccgactttgcaaccttcccagtctcttctttcgtcaag gcaaagggagagaagacggacgggacagtgtttgtgggtcgtgtcgccattccttgtact cgcggacaggagcaagtccaccgtctggtcctgtcgcagcagcaactgcaacaagtgcat cgcctcctcatggtctga

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