Syngnathus scovelli (Gulf pipefish): 125966214
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Entry
125966214 CDS
T08785
Symbol
pars2
Name
(RefSeq) probable proline--tRNA ligase, mitochondrial
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125966214 (pars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sscv01007
]
125966214 (pars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sscv03016
]
125966214 (pars2)
Enzymes [BR:
sscv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
125966214 (pars2)
Amino acid related enzymes [BR:
sscv01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
125966214 (pars2)
Transfer RNA biogenesis [BR:
sscv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
125966214 (pars2)
Prokaryotic type
125966214 (pars2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
DUF4379
Motif
Other DBs
NCBI-GeneID:
125966214
NCBI-ProteinID:
XP_049572800
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All DBs
Position
10:complement(963130..965485)
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AA seq
492 aa
AA seq
DB search
MEPVTLRIRHKVFWSLQRTGFLCCRNHSVFAEPAAPPASSSSSPSPSPSHGRQMKVPLLV
SRLYQPSNLRDMGPDSRMHGEVTCKSQRLMQQAGLIHPSNPGCYYYLPAAVRSMEKLVKV
IDQEMQQIGGQKLDMPSLCSADLWRTSERWDLMGKELFRLKDRHGVDYCLGPTHEEAVTN
LVAHQTTLSYRQLPLLLYQITRKFRDEPKPRFGLLRGREFYMKDMYSFDVSEEAAYETYE
SVCHAYTRIFGRLGLRCVQVQADTGNIGGKLSHEFQLPADVGEDRLLICGSCSFSANVET
MVSDRTECPQCKTGTLTESKGIEVGHTFYLGKKYSDMFNAAFSNAQNKLSVAEMGCYGLG
VTRILAAAIEVMSTDENIRWPGLLAPYQVCVLPPKKGSKAAEAAAMAEELVHTLGQTLPH
LRGEVVFDDRTQMTIGKRLKDADRLGYPYVVVVGQGALEETPRFEVICQQTDETLSLSKD
ELFGLLGKVEIM
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggaacctgtaacgcttcgaattcgacacaaagtcttctggagcctccaaagaacagga
ttcctttgctgcaggaaccactcggtctttgctgagccggctgctcctcccgcatcatca
tcatcatccccatccccatcgccatcccacggcaggcaaatgaaagttcctctcctggtc
tctcgtctctatcagccgtcaaacctgcgtgacatgggtcctgacagccgaatgcatgga
gaggttacctgtaagagccagcggctcatgcagcaggcaggactcattcatccttctaat
ccaggatgctactactaccttcctgccgctgtacgctctatggagaaactggtgaaagtg
atcgaccaggagatgcagcagataggtgggcaaaagttggacatgcccagtttgtgctcg
gctgatctatggagaaccagcgagcgttgggacttgatgggaaaggagctgttccgtctg
aaagatcgccatggtgtcgactactgtttgggacccacgcatgaagaggccgtgaccaat
ctggtggctcaccagaccactctgtcctatagacagctgcctctactcttataccagatc
acccgcaaatttcgagatgagccaaagccaaggtttggtctccttcgaggaagggagttc
tacatgaaggacatgtattcttttgatgtgagtgaggaagccgcttatgagacctatgaa
tctgtgtgccacgcgtacactcggatcttcgggcggctgggcctgcgttgcgtgcaagtg
caggccgacacagggaacattggtggaaaactctcccatgagttccagctgcccgcggac
gtcggtgaagacaggcttctgatctgcgggagctgctccttctctgccaacgtagagaca
atggtgtctgacagaactgagtgcccacagtgcaaaactggtacccttaccgagtccaag
ggcattgaggtgggccacaccttttacctgggcaaaaaatattccgacatgtttaacgcc
gctttcagcaacgcccaaaacaagctgagcgttgcggaaatgggctgctacggcctcgga
gtgacgcgcattctcgccgcggccatcgaggtgatgtcaacagatgaaaatatccgctgg
ccaggtcttctagccccgtaccaggtttgtgttttaccccccaagaagggcagcaaggca
gctgaggcagccgctatggctgaggagctcgttcacacattaggacagacgttgccacat
ctgagaggtgaggttgtttttgatgaccgcacccaaatgaccatcggcaagaggctaaag
gacgccgaccgactgggctacccgtatgtggttgtggttggacagggggcgctagaggaa
acacccaggtttgaggtgatctgtcagcagactgatgaaacattgtctttaagtaaggat
gagttatttggtcttttgggaaaagtggaaatcatgtga
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