Syngnathus scovelli (Gulf pipefish): 125966353
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Entry
125966353 CDS
T08785
Symbol
si:dkey-110c1.10
Name
(RefSeq) unconventional myosin-Va
KO
K10357
myosin V
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
125966353 (si:dkey-110c1.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125966353 (si:dkey-110c1.10)
04131 Membrane trafficking [BR:
sscv04131
]
125966353 (si:dkey-110c1.10)
03029 Mitochondrial biogenesis [BR:
sscv03029
]
125966353 (si:dkey-110c1.10)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sscv04812
]
125966353 (si:dkey-110c1.10)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
125966353 (si:dkey-110c1.10)
mRNA cycle factors
P-body specific factors
125966353 (si:dkey-110c1.10)
Membrane trafficking [BR:
sscv04131
]
Others
Actin-binding proteins
Myosins
125966353 (si:dkey-110c1.10)
Mitochondrial biogenesis [BR:
sscv03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
125966353 (si:dkey-110c1.10)
Cytoskeleton proteins [BR:
sscv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
125966353 (si:dkey-110c1.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
125966353
NCBI-ProteinID:
XP_049572844
LinkDB
All DBs
Position
10:4978140..4987514
Genome browser
AA seq
1636 aa
AA seq
DB search
MATLQLYTKGANVWTPDPDAVWVSAQLVQDYTPDDKHVLLRFSGGKESLYPVAAPSDLPP
LANPDISEGENDLTALSFLHEPAILHNLRVRFLDYNSIYTYCGIVLVAVNPYDELPIYGE
EVIDAYSGQDMAELEPHIFSVAENAYRTMIREEKNQSIIISGESGSGKTVSAKFTMRYFA
VVGGAAQQTSVEDKVLASNPIMEAIGNAKTTRNDNSSRFGKYIQIGFGRKGDIIGANMST
YLLEKSRVVFQSAAERNYHIFYQLCASRQLPEMRSLKLAAPEYFRYTNQGGDAKIAGTDD
VMEMERTRNAFTILGILPDQQMELFRILAAVLHLGNVKISGSGRTSDRSYIDADDSSMAI
FCKLLGVEAAHMAHWLCHRRLVLAGDTLSKPMTGQQAIEARDALAKHIYEQMFKWTVHRL
NSALRSQAGRAKTFIGVLDIYGFETFERNSFEQFCINYANEKLQQQFNRHVFYLEQEEYI
REELTWSRIEFSDNQQCIHLIEGQLGLLDLLDEECRMPKGSDDSWIQKLYDQHLTSRRHP
NFRKPRTSNTAFIIKHFADTVQYECGGFLDKNRDTVFEELVNVMKASQSELVAELFQQQG
KGTSVANGRRAQREHKLTVGFQFRQSLQMLMDTLNSTTPHYVRCIKSNDLKEPFMFDPKR
TVQQLRACGVLETIRISAAGFPSRWTYEEFFLRYRVLLRGCQRWEEARLACQQALPQLIP
TPDQYVFGKTKVFFRAGQVALLERLRAERLRAAAVKIQSCVRGWLARIYYSRTLGAIVVL
QRYWRGALARRLAQTLRYTKAALVIQKTYRMLVDRRMFLLVRQATIIIQALVRGTLTRRQ
YRLFVAERAATLLQARVRGWLARRSFTRLRAAVVLAQCCVRRKAARKELLKLKTEARSVE
RYRELNKGMEVKLMQLQMRADQEARESAALKETLRVEREVATTELAALRAKIEKLEAHQK
DVTPSPAPCSIVNQETEQEKKRAEEKAAQELLQLKQEVETLQREKASLSAETERLSASLL
QQEQAQEALVQQAASQATAAMSGELDEERRKHQGLLREFTRLEQRYDNLREMSQLTEGTR
GLRRSDSALSSEPLSPSPQSLTPRSLSPFPSAYPSPEEVRRVSVTSPNTEGGFTEWTLET
PMEQLMDKMGFTKEYGGELKGEDLAHAYDTVRVANKFLESQLLNQRNQWAEEVERLRCQL
LRVSSGSSSHQQDLLEASEQECARLRKELKELRNTVPFRRLLTQVLPSVFPTDGSPLAQQ
KGPTTAGLLECKRRDDSKLIKNLITDVRADVGVSLAPGLAASVVFLCVRQADIRGDQTAA
LSLCRAAVAAMKTTLKKHNSDLDMTALWLKNISLLHDLLTQHGPKQLCVREDLSPLTFDI
GNLSHTLSELRIQAYQQLVSITEQRLQSFIAVALLEGEDIPTGSRRQAGPAEGADAPTVA
RVLKELGALHAAMSRQALPAALMEHAFHQLVYFMSASALNSLLLRKDVCCCSRGIHIRLN
LSQLEEWLRDRGLQTEGAMSSLAPLIQAAQLLQVGKNTEADAHALVQACTALSGQQIVKI
LTNYTPHGDVEERVSLNFVRLVQGLLKDRIDAQPRQFLLEVKRVFPVTFPVQVLPAIHAD
NLVIPDSLKLTFLRRV
NT seq
4911 nt
NT seq
+upstream
nt +downstream
nt
atggcgacactgcagctgtacaccaagggggccaacgtgtggactcctgatccggatgca
gtctgggtgtcggcccagctcgttcaggactacacacctgatgacaagcatgtgctgctg
cggttttcaggagggaaggagtcactttacccggtggcggcgccgtccgaccttcctccg
ctagctaaccctgacatctcagaaggcgagaatgacctgacagcacttagcttcctccat
gagcctgccatcttgcacaacctccgcgttcgcttcctggactacaacagcatctacact
tactgcggtatcgtgctggtggctgtcaatccctacgatgagctccccatctacggcgag
gaggtgattgacgcctacagcggtcaggacatggccgagctggagcctcacatcttctct
gtggcggagaacgcttatcgcaccatgatcagggaggagaaaaatcagtccatcatcatc
agcggcgagtcgggttccggcaaaacggtctcggccaaattcaccatgaggtactttgcg
gtggtgggaggagccgctcagcagaccagtgtggaggacaaggtgctggcctccaatcct
atcatggaggccatcgggaatgccaaaaccaccaggaacgacaacagcagtcgctttggg
aaatacatccaaatcggttttggcaggaaaggagacatcatcggggccaacatgagcacc
tacctgctggagaagtctagagtggtctttcagtcagcagcagagaggaactaccacatc
ttctaccagctgtgtgcctccagacaactgcctgaaatgagatcgcttaaactggctgct
cctgaatattttcgctacacaaaccaaggaggagatgcaaaaattgctgggactgatgac
gtgatggaaatggagcgcactcgcaatgctttcaccatcctgggcatccttcctgaccag
caaatggagctcttcagaatcctggcagctgttctccacttgggcaatgtgaagatttca
ggcagtggacgcacttctgatcgttcttatattgatgcagatgacagttctatggctatc
ttctgcaagcttctgggtgtagaagccgcccacatggcccattggctatgccatcgcagg
ttggtgctagcgggcgacacgctgagcaagcctatgacgggtcagcaagccatcgaggct
cgagatgctctggccaagcatatctatgagcagatgttcaagtggaccgtgcacagactc
aactctgccctacgtagtcaggcaggtcgtgccaaaaccttcataggagtgctggacatc
tatggctttgagacctttgagcggaacagcttcgagcagttttgtatcaactacgccaat
gaaaaactgcaacagcagttcaacaggcacgtgttctacctggagcaggaggagtacata
cgtgaggagctgacatggagcaggatcgagttcagcgacaatcagcagtgtattcatctc
attgaaggacagcttggcctcttggacctgttggatgaggagtgcaggatgcccaaaggt
tcagacgacagttggatccagaagctgtacgaccagcacctgaccagccgacgtcatccc
aacttccgcaaacctcgcacgtccaacaccgccttcatcattaagcactttgctgacaca
gtgcaatacgaatgtggcggcttcctcgataagaatcgagacaccgtttttgaggagttg
gtcaatgttatgaaagcaagtcagtcggagctggtggccgagttgttccaacagcaagga
aaggggaccagtgtggccaatggacgaagagcccagagagaacacaagttgaccgtgggc
tttcagttccgtcagtccttgcagatgctgatggacactctgaacagcaccacacctcac
tatgtccgctgtatcaaatcaaacgacctcaaggagccttttatgtttgacccaaagagg
acggtgcagcagttgagagcatgtggagtgctggagacaatccgaatcagcgctgctggt
tttccatccagatggacgtacgaggagttcttcttgaggtatcgtgttctgctgcgaggg
tgccagcgctgggaggaggctcggctcgcatgccagcaggctttgcctcagctcatcccc
accccggaccaatacgtcttcggaaagaccaaagtctttttccgggccgggcaggtggct
cttctggagaggttgagagcggagaggcttcgagcggctgctgtgaaaattcagagttgc
gtcagagggtggctggcccggatttactacagcagaacccttggggccattgtcgtctta
caaagatactggagaggagcgctagcaaggcgtttggctcagaccctgcggtacaccaag
gctgctttggtaatccagaagacttaccgcatgctggtggacagacgcatgttcctcctg
gtccgccaagccaccatcatcatccaggccttagtcaggggcacactaacccgtcgtcag
taccgactgtttgtggccgagcgagccgccacgctgctccaggccagagttcgagggtgg
ttggcgaggagaagcttcaccaggttgcgagcggccgttgtgttggcgcagtgttgcgta
cgtcgcaaggctgccagaaaggagctgctgaagctcaagacggaagctcgctcggtggag
aggtaccgagagctcaacaaaggcatggaggtcaaactgatgcagctgcagatgagagca
gaccaggaggccagggagagcgccgcccttaaagagaccttgcgtgtcgagcgggaggtt
gccaccactgaactggctgctctgagggcaaaaattgagaagctggaagcccatcagaag
gacgtcactccttctcctgcaccttgttccattgtgaaccaggagacggagcaggaaaag
aagcgagcggaggagaaggctgctcaggagctactgcagctaaaacaagaggtggagaca
ctgcagagagaaaaggcctcacttagcgcagaaacagaacgtctctctgcaagcctactt
cagcaggaacaagcacaagaagctcttgtgcagcaagcggcgtcccaggccacggcggct
atgagcggcgagcttgacgaggagaggagaaagcaccagggcctcctgcgggaattcacc
aggctggagcagcgatacgacaacctgagggagatgagccagcttactgagggcaccagg
ggcctcaggagatccgactcggcgctaagctcagagcctctgtcgccctcaccgcaatcc
ctcaccccgcgctccctctcccccttcccgtccgcctacccatccccagaggaggttcgc
cgagtcagcgtgacgtctcccaacacggagggaggcttcacggagtggactttggaaacg
ccaatggaacagctgatggacaagatgggcttcaccaaagagtatggcggtgagctgaaa
ggagaagacttggcacacgcctacgacacagtacgagtagccaacaagtttttggagagc
cagttgctgaatcagcgcaatcagtgggcggaggaagtggagaggctgagatgtcagctg
cttcgagttagctcgggttcgtcttctcatcagcaggaccttctggaggccagcgagcag
gagtgtgcaaggctgaggaaggaactgaaggaacttcggaacaccgttccattccggcga
ctccttacccaagttttgccatcagtgttccccactgatggctcgcctttagcccagcag
aaaggacctacaacggccggacttctggaatgcaagagacgagatgatagcaaactcatc
aagaatctcatcactgatgtccgggcagacgtgggcgtgtcgctggctcccgggctggcg
gcaagcgtggtcttcctgtgtgttcggcaggcggacatcaggggcgatcaaactgccgct
ttgtcgctgtgtcgtgccgccgtcgccgccatgaagacgactctgaagaaacacaacagt
gatttagacatgactgctttgtggctgaaaaacatcagtctgttgcacgacctgctgact
cagcatggtccaaaacagctgtgtgtccgtgaggacttgtcgccgctgacctttgatatt
ggcaatctgagccacacgctgagcgagctccgcatccaagcctaccagcagctcgtctcc
atcactgagcaacgcctgcagagcttcatagccgttgccttgttggagggcgaagacatt
ccgacgggctctagaaggcaagcgggtccggcggaaggggcggacgctcccaccgtggct
cgagtgttgaaggagttgggcgcccttcacgccgccatgtcccgtcaggctttgcccgcg
gcgctgatggagcacgccttccaccagctggtctacttcatgtccgcctcggccctcaac
agcctgctgctcaggaaggacgtgtgctgctgcagccgcgggatacacatacgcctgaac
ttaagtcagcttgaggagtggctgcgtgaccgcggtctgcagaccgagggtgccatgtcc
tccctggcgcctctcatccaggcagctcagctgctgcaggtcgggaagaacaccgaggcg
gacgctcatgcacttgtgcaggcctgcaccgccctcagcggccagcagattgtgaagatt
cttaccaactacacgcctcatggtgatgttgaggaaagagtctcgctgaattttgtccgc
ctggtccagggcctcctcaaagaccgcatagatgctcaacctcgccagttcctcctggaa
gtaaagcgcgtctttcccgtcacgtttcccgtccaagtgctgcccgccatccacgcggac
aacttggtcatcccggactcccttaaattaacctttctacgcagagtgtga
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integrated database retrieval system
