Syngnathus scovelli (Gulf pipefish): 125966380
Help
Entry
125966380 CDS
T08785
Symbol
hmg20b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
KO
K24650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125966380 (hmg20b)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
125966380 (hmg20b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
DUF4763
HMG_WDHD1
PI3K_P85_iSH2
Beta-Casp
TMPIT
DUF4164
Motif
Other DBs
NCBI-GeneID:
125966380
NCBI-ProteinID:
XP_049572848
LinkDB
All DBs
Position
10:complement(5010898..5014196)
Genome browser
AA seq
292 aa
AA seq
DB search
MGGVKQEQNDAPQQPRASQSTEHPQEEPKKRGWPKGKKRKKVLPNGPKAPVTGYVRFLNE
RREVMRARYPDLPFPEITKRLGAEWTRLAPNDKQRYLDEAEREKMQYAQELKEYHQTEAY
QITSTKIQDKRIKKEDNPSVIISASSGLPKTSELPSRFDIPIFTEEFLDQNKAREAELRR
LRKANIEFEEQNAMLQRHIKDMYNAKERLEAELNQDEKRTQALQQHLLAIKHTLVNSLAA
VPLPGTGETATFGNLDSYLSRLSGALEGNPQKHRALLTQLSDVLSHLDSEKL
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgggtggcgtcaaacaggagcagaatgatgctccgcagcagcctcgagcctcacagtcc
acagaacatcctcaagaggagcctaagaagcgaggatggcccaagggcaagaaaagaaag
aaagtgctacccaacggtcccaaggcgccagtcactgggtacgtccgcttcttgaatgag
cggcgggaagtgatgagggcccggtatcctgacctgcctttcccggaaatcaccaagagg
ctcggagcagaatggacacgattagcgcctaatgacaaacagcgttacctagatgaggcc
gagcgggagaagatgcagtatgcccaggaattgaaggaatatcatcagacggaggcatat
cagatcaccagcacgaaaatacaagacaaaaggattaagaaagaggataatccgtctgtg
atcataagtgccagttcaggcttgccaaagacatccgagctccctagcaggtttgacatc
cccatcttcacagaggagttccttgatcaaaacaaagctcgagaggcggagttgcgtcga
cttcgcaaagccaacatcgagtttgaggagcagaacgccatgctgcagaggcacatcaaa
gacatgtacaacgccaaagagcgcctggaggcggagcttaaccaggacgagaagcgcacg
caggcgcttcagcagcacttgctggccattaaacacacgttggtcaacagtctggctgct
gtgccgctaccaggcacgggcgagacggcgaccttcggaaacttggattcgtatctcagt
cgtctcagcggcgcgctcgaagggaaccctcaaaagcaccgggccttgcttacgcagctt
agcgatgtcctctctcacctggacagtgagaagttatag
DBGET
integrated database retrieval system
