Syngnathus scovelli (Gulf pipefish): 125966633
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Entry
125966633 CDS
T08785
Symbol
cul4a
Name
(RefSeq) cullin-4A
KO
K10609
cullin 4
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03420
Nucleotide excision repair
sscv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125966633 (cul4a)
09124 Replication and repair
03420 Nucleotide excision repair
125966633 (cul4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125966633 (cul4a)
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125966633 (cul4a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125966633 (cul4a)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
125966633 (cul4a)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
125966633 (cul4a)
TCR (transcription coupled repair) factors
Cul4-CSA complex
125966633 (cul4a)
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125966633 (cul4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
125966633
NCBI-ProteinID:
XP_049572925
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All DBs
Position
4:22583555..22589369
Genome browser
AA seq
755 aa
AA seq
DB search
MAEDTRQEKRANFSALTDTNGMTRTSSMSSGKSGTSKKLVIKNFKDRPKLSENYTEDTWL
KLRDAVSAIQNSTSIKYSLEELYQAVENLCSYKVSPTLYKQLRQVCEDHVRAQIYQFREE
SMDNLSFLKRMNRCWLDHCRQTIMIRSIFLFLDRTYVLQSSLLPSIWDTGLELFRIHIVS
DSVVQKRTVDGILEQIELERNGETADRSLLRSLLGMLSDLQVYKVAFEERFLSETNRLYA
AEGQRLMQNRDVPEYLHHVARRLEEENDRVMSYLDLSTQKPLINCVEKQLLGEHMSTILQ
KGLSILLDGNRVTELALLYQLFSKVKDGLSTLLQFWRDYIKTFGEEIVCTPEKDKDMVQE
LLDFKDKMDNVAQSCFARSEGFINAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEA
TEEELERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECG
AAFTSKLEGMFKDMELSKDIMIQFKQYTQNQSEPSNIELTVNILTMGYWPSYLPMEVHLP
SEMVKLQEVFKLFYLGKHSGRKLQWQPTLGHAVLKAEFKEGRKELQVSLFQTLVLLMFNE
GEEFSMEEIGTATGIEEGELKRTLQSLACGKARVLNKIPRGKEVEDGDRFSFNNDFRHKL
FRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAVVRIMKMRKTLSHNLLVSELYNQLK
FPVKPGDLKKRIESLIDRDYMERDKENPNQYHYVA
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagacaccagacaggagaagagggccaacttctcggctttaacggacaccaac
gggatgaccaggacatcctccatgtcttctggaaaatctggcacttccaagaaattagta
ataaaaaatttcaaagatcggcccaaattatccgagaactacaccgaggacacttggttg
aaactgcgagatgcagtcagtgccatccagaacagcacatccatcaagtacagccttgaa
gagctctatcaggctgtggagaacctgtgttcgtataaagtctcgcccacattgtacaag
cagctacggcaggtatgcgaggatcacgtgcgggcccaaatctaccagttcagagaagag
tctatggacaacctgtctttcctgaagaggatgaatcgctgctggctggatcactgccga
caaactataatgattcgaagcatctttctcttcctggaccgcacgtatgtgctgcaaagc
tccttgctcccctccatctgggatactgggctggaattgttccgtatacacatcgtaagt
gacagcgttgtccagaagcgtaccgtcgacggcattttggagcagatcgaactggagcgc
aacggcgagacagctgaccgtagtttgttgaggagcttgctgggaatgctttcagacctc
caggtctataaagtggcttttgaagagcgatttttgtctgaaacaaatcgcttgtacgct
gcggagggacagcgtttgatgcaaaacagagacgtgcccgagtacctgcaccatgtggct
cgtcggttggaggaggagaacgatcgcgtcatgagctacctcgacctgagcacccagaag
cctctcattaactgcgttgaaaaacaacttttaggagagcacatgtccacaatactgcaa
aagggattgagcattcttttggacgggaaccgtgtgacggagctggccctcctctaccaa
ctgttcagcaaggtgaaggacggactgtccactttgctgcagttttggagggattacatc
aagacctttggcgaagagattgtttgtacaccggagaaagataaggacatggtacaagag
ctgctggacttcaaggacaagatggacaatgtggctcagagctgttttgcacggagcgaa
ggcttcatcaatgccatgaaggaggcctttgagacgtttatcaacaaaaggcctaacaaa
cccgcagaactcatcgctaaatacgtggattcgaagctaagagccggtaacaaagaggca
acagaggaagagctggagagaattctcgacaagatcatgatcatattccgcttcattcac
ggaaaagatgtctttgaagccttttacaagaaagacttggccaagcgtctgctggttggc
aagagtgcttctgtcgatgctgaaaagtcaatgctgtccaagctgaaacatgaatgtgga
gcagcatttaccagtaagctagaagggatgtttaaggacatggaactctccaaagacatt
atgatccagttcaagcagtacacgcaaaaccagagcgagccaagcaatattgaactaacc
gtcaacatcctgaccatggggtactggccttcgtacttgcccatggaagtccacttgccc
tcagaaatggtaaaactccaggaagtgttcaagctgttctacttgggaaagcacagcggg
agaaaactgcagtggcagcccacactcggccacgctgtgctgaaggcagagtttaaagaa
ggaaggaaggagctgcaggtctccctgttccagacgttagtgctgctgatgttcaacgag
ggagaagaattcagcatggaggagatcggtactgccacgggtatagaagagggcgagctc
aaacgtacgttgcagtccctggcctgtggaaaagcccgcgtcctcaataagattccacgg
gggaaagaagtggaggacggtgaccgtttcagtttcaataacgatttcagacacaaactt
ttccgcatcaagatcaaccagatccaaatgaaagaaaccgtagaggagcaggtcagcacc
acagagcgggtgtttcaagaccggcagtatcaaattgatgccgctgtggtacgtatcatg
aagatgagaaagaccctgagtcacaacctactcgtgtcggagctctacaaccagttgaag
ttccccgtcaagcctggcgacttgaaaaagcgtatcgagtccctcatagacagagactac
atggagcgggacaaggagaatccgaaccagtaccactatgtcgcctga
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integrated database retrieval system
