Syngnathus scovelli (Gulf pipefish): 125966660
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Entry
125966660 CDS
T08785
Symbol
nav2a
Name
(RefSeq) neuron navigator 2 isoform X6
KO
K19483
neuron navigator 2 [EC:
5.6.2.4
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125966660 (nav2a)
Enzymes [BR:
sscv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
125966660 (nav2a)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
Check point factors
Other check point factors
125966660 (nav2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ubiquitin_6
CH
AAA_14
AAA
nSTAND3
AAA_16
AAA_25
NPHP3_N
PhoH
AAA_22
CAMSAP_CH
AAA_28
AAA_19
AAA_5
ResIII
AAA_18
BrxL_ATPase
CH_2
AAA_7
IstB_IS21
RNA_helicase
AAA_24
DUF4407
ABC_tran
SlyX
Motif
Other DBs
NCBI-GeneID:
125966660
NCBI-ProteinID:
XP_049572977
LinkDB
All DBs
Position
4:complement(21732852..21779939)
Genome browser
AA seq
2452 aa
AA seq
DB search
MPAILMASSSMKSGLPKPVHSALPIPQVSSRSSALAAPLKTQIPSLNQHLGLGRPRGPSE
IRRNAQIYTDWANHYLAKSGHKRLIKDLQTDVADGVLLAEIIQVVANEKIDDINGCPKSR
SQMIENIDVCLSFLAAKGVNTQGLSSEEIRNGNLKAILGLFFSLSRFKQQQQQQQSQRHN
PQPAPAPTSQPRTLHPVLSQQSSAPAQLSQSPHGTPTPAVQKAAQAEMQSRIGSQSKLLK
FSLGQKKTSRLPGPSARVSTAGGDIAPRGSVGGAGNRRSQAFNDKTKGSSPLNRDSSDGM
ASPPSLITNENAAFPSVTVGSSVSIPATSASSLPSTAIPHPGSNSKPWRNKSMSSKHASQ
AASSTSGSPSAMQSTKQDKETSSKATLGSEAPPKVVTQKSMLEKLKLFNSKGGSKSSSSS
NGGSDNAAPGGQVEKAEIGSNTDPFEEDDGNLRPGTNGTSNATTASSPKIALRGIAQRTF
SRALTAKKSSAKAPEKDKERAKEKEKGKEVGKRLSMQDRTEFRGEELKEEITPVAGDMDN
TNKKTSKIASFIPKGGKVAKKESSASAHSGIPKPGGKIPGIGGKASSAGTKEERPRSVRL
GGVPAPHRGHPEKDSKSSTSSLHEGKAGSAPSPGGNNTQSTASNTVSVQLPQTQQHHTHP
NMATVAPFMYRSQTEGEEVLSSESSSGGRGGDIAFSKTNQTSIEDLSGEDPETRRLRTVK
NIADLRQNLEETMSSLRGTQVTHSTLETTFDGSVTTDISGGSNSSAGGKSILSLTSARPS
LSSWRLGQSSPRLQAGDAPSTGNGYAGRVAGGQTGRYLYPGHLRRQLAGRSGGLCGGDLA
DRPGEDVDLDGLAMEVTGYMSDGDVLSKNASRTDDVTSGYMTDGGLGLYTRRLNRLPDSM
SAVRETLHRNAASGQGDADSWDDSSSVSSGISDNIDTDDINTSSSISSYANTPAAQRKGL
STQPVTDAEKHSVSTAVHQAWSGDEVKRPDGGSNSGVKMEPGSKWSRRNTSDISDESDKG
GSGRKSASVSHTGSWRRGMSTQVGVTPPRTKSTSGTCSSSAVTVKTHTSGKTDDVKVSEK
GRLSPRSNGLNSDAADEAKKQSVSTSHTATPSSLTHTHSEPQTHQRAPTSTFGFKKQGHG
MVAMVTASGATVTSGSATLGKIPKAGVRSLVGLKAGGQDGGLLLGHHDDSFLPASARSTL
QYRSLPRPGRSGSAARNGNRSSTSSIEAAVLSVTSHGKNAFGITKANGGPLANQTDREKG
VSDIDNFRSGGSATVPLTGRQQVSSPTLRRLFGGKSSKQAPVITADNMKNSTVISNPHAT
MSHVTTMSESADGGLDSETISPMFGGRAPTSATGTLGSEQASSPGSIYSSTGPSNSLTWG
TTFSTFSSSSAQSRESTLGGHGGAGSVGYPSVSSMHTSSESIDMSLGSAGGGHGGHREDT
LSALGRAGSVKTGVSESPLSSPSASPKFSRNTLPRKQDSGPLCGRNTLPKKGLRYGPPPQ
LRSHEEGRDWLRSHSTSGLQESASNSPFSPGSSLTSPSGTRFNFGQLASSPTSTAQINLT
GQRNNSLTNQDVTFDPCSDNRLRNSCMSLDEKTRTMSRSGSFRDGFEEVHGSSLSLVSST
SSMYSTNEEKSQSEIRKLRRELDASQEKVSALTTQLSANAHLVAAFEQSLGNMTIRLKSL
TLTAEQKDSELNELRRTIELLKKQNAVAQAAINGVINTPELTSKVERTGSSNGSVHHQQQ
QQKQPDLRIRRQHSSDSVSSVASATSHSSVGSNMDADAKNKKKNKKNWLRSSFKQAFSKK
KSPKSASSHSDIEEMTDSSLPSSPKLPHNGTGATNHMLRNTHSNSLLSECLDSEAETVMQ
LRSELREKEMKLTDIRLEALSSAHQLDQLREAMNRMQLEIEKLKAENDRLKLENQGSRTG
SQVSISSSPPPHTHSQQAPGANVGISQHSLNLATSESTSLDMLLDDTGGEGGVRKEGRRV
KIVVSLDGDALWPQEARSPSFLIGCIGVSGKTKWDVLDGVVRRLFKEYITHVDPVSQLGL
STDSVEGYNIGDIHRPRSPGAAHTPELLPCGYLVGDSNTINIQLKGASSDSVDSLVFDTL
IPKPMLQRYVSLLREHRRVILSGPSGTGKTYLANQLSQHLLLLEGRPLTPHAIVTFNVDH
KSSKELRQYLSGLAEQCSGVLGEESPLVVILDNLHHVSSLSEIFNGVFNSSHKHSPYIIG
TMSQATSSAPNLQLHHNFRWVLCANHTEPVKGFLGRFLRRKLIEVEIGSRTRNVELVKII
EWIPRVWQHLNRFLEMHSSSDVTIGPRLFLSCPIDVEGSRVWFTDLWNYSIIPYMLEAVR
EGLQLYGRRAAWEDPASWVIDTYPWSATPAPADWPPLLQLRPEDVGFDGYSAPREGVRKE
PPQSDSDADPLMNMLMRLKEAATSSSPQSYDSDSNSNSHQDDILDTSLESTL
NT seq
7359 nt
NT seq
+upstream
nt +downstream
nt
atgccagccatcctcatggcctcctccagcatgaagtcaggactccccaaaccggtacac
agcgcgctgccgatccctcaagtctccagcaggtcgtcggctctcgctgcgccactaaag
acccaaattccatccctgaaccaacatttgggtttgggacgtccacgaggcccttcggag
atcaggcggaacgctcagatctacaccgactgggccaaccactacctcgccaagtcggga
cacaagcgcttgatcaaggaccttcagacggatgttgcggatggcgtgctgctggctgag
atcatccaggtcgtcgccaacgagaagattgatgacatcaatggctgccccaagagccgc
tctcagatgattgagaacattgacgtctgcctcagtttcctggcagccaaaggagtcaac
actcagggattgtcttcagaagagatccgcaatggcaatctaaaagccatcctcggcctc
ttcttcagcctgtcccggttcaaacagcagcagcagcagcagcagtcccagaggcacaac
ccccagccggcccccgccccgacatcccagcctcgcaccttgcaccccgttttgagccag
cagagcagtgccccggctcagctgagccagtctccgcatgggactcccacacccgcggtc
cagaaagcagcccaggccgagatgcagtccaggattggctctcagagtaaactactcaag
ttttcccttggtcagaaaaagacctctagacttcccggcccctcggcgagggtgtccact
gcaggcggtgacatcgctccacgaggctcggtcggcggcgccggaaacagacgcagccag
gccttcaacgacaagaccaaaggcagctcgccgctcaacagagattcctcagatggaatg
gcctctccgccatcgctgataacaaatgaaaacgcggcattcccttcggtgaccgtcggc
tcctccgtcagcatccccgccacctccgcttcgtcattgccctccaccgccattccccac
ccgggcagcaacagcaagccctggaggaacaagtccatgagttccaagcacgcctctcaa
gctgcctcctccaccagcggttcaccgtccgccatgcaatcaacaaagcaggacaaggag
acctcctctaaggctactttgggatctgaagctcctcctaaagttgtcacgcaaaagtca
atgttagagaagcttaagctctttaacagcaagggaggatctaaatcctcctcctcgtcc
aatggaggaagtgacaacgctgcgcccggcgggcaggtggagaaagctgagattggctca
aacaccgaccccttcgaggaagatgacggcaacctccgcccgggaaccaacggaacctct
aacgccactactgccagcagccccaaaattgccttgagaggaattgcccagcgtactttc
agcagggctctgactgccaaaaagagttccgccaaagcccccgaaaaagacaaggagcgg
gccaaggagaaggagaaagggaaggaagtcgggaaacggctctccatgcaggacagaaca
gaattcaggggagaggagctgaaggaggaaataacacctgttgctggagatatggacaac
acaaacaaaaagacctcaaaaattgccagcttcattcccaaaggggggaaagttgccaaa
aaggagagctccgcctctgcacacagcggaataccaaagccaggaggcaaaatcccagga
attggcgggaaagcctcttcagcggggacgaaagaggagagaccacgaagcgtgaggctc
ggcggggttccggctcctcaccgaggtcatccggaaaaggacagcaaaagctctacctcc
agcctgcacgaagggaaggcaggctccgccccctcgcccggaggaaacaacacgcagagc
acggccagcaacacagtcagcgtgcagctacctcagacccaacagcaccacacccacccc
aacatggccaccgtggcacctttcatgtacagatcccaaactgagggtgaagaagttttg
agcagtgaatccagctcaggaggaagaggcggggatattgccttcagcaaaaccaaccag
acctccatcgaggacctttcgggggaagacccagagacgaggagattgcggactgttaaa
aacattgcggacctgcgccagaacttggaggagaccatgtccagcctgcggggaactcag
gtcacacacagcaccttggaaaccacttttgatggcagcgtcaccaccgacatcagcggt
ggcagcaacagcagcgcaggggggaaaagcatcttaagtctcacctccgccagaccctcc
ttgtcgtcatggcgactgggtcaatccagccctcgcctccaagccggcgacgccccttcc
acggggaacggatacgccggccgcgtggcgggtggccaaaccggacgctacttgtacccg
gggcatctcaggcggcagctagccggaaggagcgggggcctctgcggcggggacctcgcc
gacagacccggggaggacgtggaccttgatgggctcgccatggaggtcaccggatacatg
agcgatggagatgttctgagcaagaacgcatctcgcaccgatgatgtcaccagtggctac
atgacggatggaggtttgggtttgtacacgcgccgtttgaaccgactgcctgacagcatg
tcggccgttcgggagaccttgcatcgaaacgcggcgtccggccagggagatgccgacagt
tgggatgacagcagctcggtgagcagcggcatcagcgacaacatcgacacagatgacatc
aacaccagctcgtccatctcctcctatgctaacacacctgccgcgcagcgcaaaggcctt
agcacgcagcctgtgacagatgccgagaagcactcggtgtccacagcggtccaccaggcc
tggtctggagacgaggtgaagaggccagacggagggtcgaacagcggggtcaaaatggag
ccgggctccaagtggagccgccgcaacacctctgacatctcggatgagtccgataagggc
ggatcgggaaggaagagcgcttctgtgtcccacacggggtcctggaggagaggaatgagc
acacaagtgggggtgacgcctcctcggaccaaaagcacgagtggcacgtgctcctcgagc
gccgtcacggtcaaaacccatacttcaggtaaaacagatgacgtcaaggtttcagaaaag
ggacgtctctctccacgttccaacggcctcaactctgacgccgccgacgaagcaaagaaa
caatcggtctctaccagccacacagcgacgcccagctccctcacgcacactcattccgag
ccccagacacaccaacgcgcaccaactagcacatttggcttcaagaaacaaggccatggc
atggtcgccatggtaaccgccagcggcgccaccgttaccagtggctcagccactctgggg
aaaattcccaaagccggtgttcgctcactggtcggattgaaggcgggcgggcaggacggg
ggcttgcttctcggccaccacgacgacagcttcctccccgccagcgcccgctccaccctt
cagtaccgaagcctcccgagacccggccgctcgggttcggccgcccgcaacggaaaccgc
tcatccaccagcagcatcgaagccgccgtgctctcggtcacgtcgcatgggaaaaatgcg
ttcggcatcaccaaggccaacgggggtccgttggccaatcagaccgatcgggagaagggc
gtctcggatattgacaacttcaggagcggaggatcagcaaccgttcctcttacgggaagg
cagcaggtttcgtcgccaacactgcgcaggttgtttggtggcaagagcagcaaacaggct
ccggtcatcacggcggacaacatgaagaactccaccgttatctccaacccgcatgctacc
atgagtcacgtgaccaccatgagcgagtctgccgatggagggctggacagcgagaccatc
agcccgatgttcggaggcagagcacccacgtccgccactggcacgctgggcagcgaacag
gcgtccagtccaggctcaatctactcctccaccggcccctccaacagtctaacgtggggc
acaacattctccacattcagcagctcctcggcccagagcagggagagcacgctaggtggg
cacggcggtgcgggcagtgtgggttacccgtctgtcagcagtatgcacacgagcagcgag
tccattgacatgagcctgggtagtgctggaggaggtcacgggggtcacagggaggacacc
ctgtccgccttgggccgcgctggcagcgtcaagacgggcgtgtcggaaagcccgctctcc
tccccgtccgctagccctaaattcagccgaaacactctgcctcggaaacaggacagtggg
ccactctgtggcagaaacactctgcctaagaagggactcaggtacggcccgccccctcaa
ctgcgaagccacgaggagggccgtgattggctgcgttctcactccactagtgggctgcag
gaatcggccagtaactctcccttttcccccggctccagtctcacctccccttcagggacg
cgcttcaatttcggacagcttgcgtcaagcccgacctcgacagctcagatcaatctgacc
ggtcagcgtaacaacagcctgaccaaccaggatgtcacctttgacccctgcagcgacaac
cgcctgagaaactcttgcatgtccctcgacgagaagactcgcaccatgagccgctcgggc
tctttccgcgacggattcgaggaagttcatggctcgtccctctctctggtctccagcacc
tcctccatgtactccacgaatgaggagaaatctcagtctgagatccgcaagttacgccgg
gagctagatgcctcccaagagaaagtttccgccctgacgacacagttgagcgccaacgct
cacctggtggcggcgttcgagcagagtttgggcaacatgaccatcaggttgaagagtctc
accttgacggctgagcaaaaggattctgagctgaacgagctgaggaggaccatcgagctg
ctgaagaagcagaacgctgtcgctcaagccgccatcaacggggtcatcaacacacctgag
cttacatccaaagtggaaaggacaggtagcagtaacggcagcgttcatcatcagcagcaa
cagcagaagcaaccagatctacgaatcaggaggcagcattcctccgacagcgtcagcagc
gtagctagcgccaccagccattccagcgtgggctccaacatggacgccgatgctaaaaat
aagaagaaaaacaagaagaattggctgcgaagctccttcaaacaggcgttcagcaagaag
aaatctcccaaatcagcttcatcccactcggacatcgaggagatgacggattcttcgctg
ccctcctctcctaaactgcctcacaacgggaccggcgcgaccaaccacatgctcaggaac
acacactccaattcgctattgtctgaatgtttggacagcgaggcggagaccgtaatgcag
ctgcggagtgagctcagggagaaggagatgaaactgacagatatccgcctggaagcgctc
agctccgcccatcagctcgaccagctacgagaggccatgaaccgaatgcagctggagatt
gagaagctgaaggcggagaatgatcgtttgaagttggagaatcaaggaagcaggacgggc
tcccaagtgtccatctcctcgtcccctccccctcatacgcacagccagcaggctcctgga
gccaatgtggggatctcacagcacagtctgaacttggctaccagcgaatccaccagtctt
gacatgctgttggatgacacgggtggagagggaggtgtgaggaaagaaggtcgccgcgtg
aagatcgtcgtcagccttgacggcgacgctttgtggccgcaggaggcgcgctctccgagc
tttctgatcgggtgcatcggtgtcagcggcaagaccaaatgggacgtgttggacggagtg
gtccgacgtcttttcaaagagtatatcacccacgtggacccggtaagccagctgggcctt
agcacagacagcgtggagggatacaacatcggagacatccataggcctcggagccccggc
gccgctcacacccccgagctgctaccttgtggctacctggtcggagacagcaacaccatc
aacatccagctcaaaggcgcgagcagtgacagcgtggactcgctggtgttcgacacgctc
atcccaaaaccgatgctgcagcgctacgtctccctgctgagggagcaccgcagggtcatc
ctgtcgggccccagcggcacaggaaagacgtacctggccaatcagctttctcaacaccta
ctgctactcgagggccgacctctgacccctcacgccatcgtcacgttcaacgtggatcac
aaatccagcaaggagctccggcagtatctgtcgggattagccgagcagtgcagcggggtg
ttgggtgaggagagccctctagtggtcatcctggacaacctgcaccacgtcagctcactc
agcgagatcttcaacggcgtctttaacagcagccacaagcacagcccgtatatcatcggc
accatgagtcaagctacctcgtctgcgcccaacttgcaacttcaccacaacttcaggtgg
gtgctgtgcgccaaccacacggagccggtcaaaggcttcctgggacgcttccttcggagg
aagctgatcgaggtggaaattggcagccgaacgcgtaacgtggagctggtgaagatcatc
gagtggatcccgagggtgtggcaacatctcaaccggttcctggagatgcacagctcctcg
gatgtgaccataggtcctcgtctcttcctgtcctgtccgattgacgtggagggatccagg
gtttggttcactgatctctggaattactccatcattccgtacatgctggaggctgttcga
gaaggactgcagttgtatggccggagagccgcgtgggaggaccccgcctcctgggtgatc
gacacctacccgtggtcagctacgcccgctccagccgattggcccccgttgctgcagctg
agaccagaagacgtgggcttcgatggctactcggccccgagagaaggagtccggaaagag
ccgcctcaaagcgacagtgacgcagacccgttgatgaacatgctgatgcgcctgaaggag
gccgccacgtcgtcaagccctcagagctacgacagcgactccaacagcaacagccaccag
gacgacatcttggacacgtcgctggagtccaccctgtga
DBGET
integrated database retrieval system