Syngnathus scovelli (Gulf pipefish): 125966712
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Entry
125966712 CDS
T08785
Name
(RefSeq) collagen and calcium-binding EGF domain-containing protein 1
KO
K19638
collagen and calcium-binding EGF domain-containing protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
125966712
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Gene cluster
GFIT
Motif
Pfam:
Collagen
cEGF
EGF_CA
FXa_inhibition
hEGF
EGF
EGF_3
Motif
Other DBs
NCBI-GeneID:
125966712
NCBI-ProteinID:
XP_049573083
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Position
4:complement(20413880..20429516)
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AA seq
386 aa
AA seq
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MGHIDGATLLAFGAAMCAALLCGSGVSSIRTTHEMDASSGKCPDNKILTVEYPCVQAGGK
SGTCFRRKCCEGFRFVMGRCLPESVDVCAESPCEQQCTDNFGRVVCTCYQGYRFDRERHR
NHQSPYCLDIDECKESGGNVCEHECVNTGGSYLCRCQSGYLLAPDQHSCIAVHNLSSSGK
SDTLMSAATCSFTCQDFMTMKSSLLQIKLRLASPQAPNLLANRSDKPSHRRSGKNPDRLC
RPGLPGPPGPPGVPGHPGGPGARGDPGEGGPPGPRGPRGDIGPIGPEPDLRHIKRGRRGP
VGPPGAPGRDGLKGDRGADGPSGPPGPPGSFDFLLLMMADIRNDIIELQEKVFGERRGIS
LDSFPSVGESDFTEWGSGQGDLMFST
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgggtcatattgatggtgctactctactagcgtttggcgccgccatgtgtgcggctctg
ctttgcggctcgggtgtcagctccatcaggaccacacatgagatggacgcttcaagcggc
aagtgtcccgacaataaaattctaaccgtggagtatccctgcgtccaagctggagggaaa
agcggtacttgtttcaggaggaaatgctgcgagggcttcaggtttgtgatgggcaggtgc
ttacctgaaagcgtggacgtgtgtgccgagtcgccgtgtgagcaacagtgcacagacaat
ttcggacgggtggtgtgtacatgctatcaaggttatcgtttcgatcgggagagacaccgc
aaccaccaatctccttattgtcttgacatagacgaatgcaaggagtctggcggcaacgtg
tgcgagcatgagtgcgtcaacacgggtggcagctacttgtgtcgatgccaaagtggatac
cttctggctcccgaccaacattcatgcatcgccgtgcacaatttgagttcatcagggaag
tcagacacgctaatgagcgcagccacttgctcctttacctgccaggacttcatgaccatg
aaaagcagtctgctgcaaataaaactgcggctggccagtccgcaggctcctaacctgctg
gccaaccgcagcgacaaaccttcccacaggaggtcgggaaaaaatcctgacagattgtgc
cgtcctggtctacctggacctccaggacctcctggagtcccaggtcacccagggggtcca
ggagctagaggagacccaggtgagggaggccctccaggtcctcggggcccccggggggac
attggacccatcgggccagagcctgatctgagacacatcaaaagaggtcgcagaggacca
gtgggaccacccggggcacccggaagagatggtttaaagggtgatagaggagccgatggt
cctagcggtccccctggcccacctggctcctttgacttcctgctgctgatgatggccgac
attcgcaacgatatcatcgagcttcaggagaaagtgtttggagagaggaggggcatctcg
ttggactcttttccctctgtcggggagtccgatttcaccgagtgggggtccggccaaggg
gacctcatgttcagtacctga
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