Syngnathus scovelli (Gulf pipefish): 125966739
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Entry
125966739 CDS
T08785
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04120
Ubiquitin mediated proteolysis
sscv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125966739 (syvn1)
04120 Ubiquitin mediated proteolysis
125966739 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125966739 (syvn1)
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125966739 (syvn1)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125966739 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-Nse
FANCL_C
Motif
Other DBs
NCBI-GeneID:
125966739
NCBI-ProteinID:
XP_049573438
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All DBs
Position
1:complement(21053255..21059618)
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AA seq
623 aa
AA seq
DB search
MVRATLVTVTSLVLTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLVFLKCFHWLA
EDRVDFMERSPNISCLFHFRVLSLMGLLGALDFLFVYHACQSIITRGASVQLVFGFEYAI
LLTMLLTMFIKYILHTVDLQSENPWDNKAVYMLYTELLTGFIKVILYIAFMTIMMKVHTF
PLFAIRPMYLAMRQFKKAVTDAVMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASHNNPTPTPAQAAAPAAAAPAHAP
AAQPANVAPGMLAGFPPGLFPFWGPFPGMPHPAPAAPGAGDALQGNTEAAQAAGTGPSTS
SGTDQATGDAPGSAVPGFPFSVPPPPFPTAPWLPMPPPPPPFMSSMPPPPPSLSQLSEEE
LRELEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLTPPRSDGNIGEASGTSG
PASFPAAGASTDDQSQEKISSPSMSKVPIQTVESASTSATWDSERRNQEDEGSEDEDGEP
NAAELRRRRLRKLVTAPLAPADD
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagcaaccttggtgaccgtcaccagtctggtgttgaccggtgctgtggtggcg
cacgcgtatctgctcaaacaccagttttacccaactgtcgtctacctcaccaagagcagc
cccagcatggcggtgttgtacattcaggcgtttgtgttggtgtttcttttgggaaagttc
atgaggaaagtgttttttggacagctacgggctgcagaaatggagcatctcattgagcgt
tcctggtacgcggtgacggagacgtgcctggccttcactgtattcagggatgacttttcg
ccacgctttgtcgccctcttcacacttctggtcttcctcaagtgctttcactggttggct
gaggatcgcgtggactttatggagcgaagtccaaacatatcctgtcttttccactttcga
gtcttatctctcatgggtctgctgggagctttggacttcctgtttgtttaccacgcctgt
caaagcatcatcacccgaggtgcctctgtgcagcttgtctttggctttgagtacgccatc
ctgctgaccatgctactgaccatgttcattaagtacatcctgcacacggttgatttgcaa
agtgagaatccctgggacaacaaggctgtgtatatgctctacacagagctcctcactggt
ttcatcaaagttatcctgtacattgcctttatgaccattatgatgaaggttcacactttc
cccctatttgcaatccggcccatgtatctggctatgaggcaattcaagaaagcggtaact
gatgctgtaatgtctcgaagagccattcgcaacatgaatacactgtaccctgacgccaca
ccggaagatctgcaggcttctgacaacgtttgtatcatctgtcgtgaggaaatggtcacc
ggagcaaagaagttaccttgtaatcacattttccactccagttgcttgcgttcctggttc
cagagacagcagacctgccccacttgtcgtatggacgtcctgagggcatcgcataacaat
ccgactcctacgcctgcccaggctgcggcccctgctgcagcagcccctgcgcacgctcct
gctgcacagccagctaacgtggcccctggcatgttggccggcttcccaccaggcctcttc
cccttctggggtccatttcccggaatgcctcatccagctccggcagctcccggtgctggc
gatgcgctgcagggaaacacggaagcggcgcaggcagccggcacaggcccgtccacctca
tccggcacggaccaggccacaggtgacgctccgggctccgctgtgccgggattccccttt
tccgttccccctcctcccttcccgactgcaccgtggctgcccatgccaccgccacctcct
cctttcatgtcgtcgatgccgcctcctcctccgtctctgtcgcagctgtccgaggaggag
ctgagggagctggaggccgagggtcgacggggcctagaggccaggctgcagtgtctccaa
aacattcacaccctgttggacgccgccatgcttaatattcaccattacctcagcaccgtc
gccacgctcactcctccgaggtctgacggcaacataggagaagccagcgggacaagcggc
cctgcttccttccccgctgctggcgcgagcacggatgatcagagtcaggagaaaatctcc
tctcccagcatgagcaaagttccaatccaaacggtcgaatccgcctccacttctgccact
tgggatagcgagagaagaaaccaagaggatgaaggatcagaggacgaggacggcgagccg
aacgccgccgagctgaggcgccgaaggcttcggaagctcgtaacggcgccacttgcgcct
gcagacgattga
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