Syngnathus scovelli (Gulf pipefish): 125966759
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Entry
125966759 CDS
T08785
Name
(RefSeq) DNA-binding protein RFX7
KO
K09175
DNA-binding protein RFX7
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125966759
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Other basic domains
RF-X
125966759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Cdc6_C
DUF5308
Motif
Other DBs
NCBI-GeneID:
125966759
NCBI-ProteinID:
XP_049573131
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All DBs
Position
4:14733357..14745033
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AA seq
1382 aa
AA seq
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MAEEDPQQQQQQQQHQQHADRGAGSFQPGLLSGLQSAEAGALQLRIKNSICKTVQSKVDT
ILQDVEKFTDIEKLYLYLKLPSGPISSASVEKSDQSAVSSSRTQQMHAFNWIHNHLEEYP
ETSLPKQEVYDEYKSFCDNLNYHPLSAADFGKMMKNVFPNMKARRLGMRGKSKYCYSGLR
KRPFVHFPCLPSLELQKTGEGCDGLDSAGGYLGSMKEEVRFAACDLVCEWAQKVLKRPFE
AVEELARFLMDSHYISNKSLAALTIMTGAATEVKPLQAVSAFVPTADAHSFQPQTATLSS
PTVDAKQQLQRKIQRKQQEQKLHSPIPGEGPIKTTDDGSGQCGSPVSPSAQPTIGIVVAA
VPRPVTTQQSGQLMSASPVGTGESKLLPINFQVVTQTVQPPKQSAKSSVNILPSPVGERS
ARPRYPQILPKPATSNAIALCSPSTMLIGNNPIKTVMTTCHVSPVSLVKMTAISLAPHSG
NATTSLTNTTLRPASAGISSCSLSEDILRSHQNTRSTSALPILAPQVDAHDIDVEMEVEG
IHMNREKQIVSSVTMAQRAASVPIPQTKGFHTMETTSSSKYDANVPVTTNAAAVVNNTPT
NMRSLNLAPSCPNMRVISTYNSNPASSFGEGICAAKSFRKRSGLSPAPSPVKRAFLSPHP
EEGTAGLGYDSRRPESAPVAREMEMKMMKMSSFLPGQVNTIGNASSRASGFVTVAKTQSS
MQRKNTFNVMETCTGVGHPITQQPEEHLMSDAYTLADNSNSSAGLRHLQPQSYAQAVSGP
LDFLDRASTSSQLPMQTEIEYFPFDDDVTQDSIVEELVQMEEQMKLNKQEFGNSVTLQAQ
QAVMTHNTMSANQTLNTFYRATNSSGLSNLVQTPTPTPTSEMTGVQGLTRESPRSRITPI
TPVDSAPGSSRHTPVGTPLSSCSSTVPPSPVECRNPFAFTPINSSVTSFHDSGAVSSSPV
KPMQRPTATHPDKTRLDWMNNSYSGNGSLNKSNNAVGILPSYQGLIDDHFQKPHAFAVPH
ARHHDSRFGRLTPISPVQQQVASMAGATKQEGFAVPAPLDNKGSNLPASGSFRCRSVSPA
IHQRNLVASTAASGLHNIHQQCVSPFNSPVTPEMLNIFANNQGNLGVSSVAQRSRSVPLN
IMMQTEVPPMTGQQCGGMNITDVLLGKLDGDHDTARGMGMNNMPSSYTARMNLTQILESG
NVSPIALDSSGTPRPNYLTSEQMFSSATQSASEGQHQQHQQHQQHQQHQQHQQHQQHQQH
QQQATRQQQLGFSHTFKGVQPDSNLAAGNQLVQQVPGLAAGGADFPCELRMTSDLSGSIN
DLNTLDANLLFDPGRQQGQFQSAAPEEMANQPLFQQITSDATHSGGLEWLESKDHTTVGL
MG
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggaggacccccagcagcagcagcagcagcagcagcatcagcagcatgcagac
cgaggggcgggcagcttccagcctggtctcctctccgggctgcagagcgccgaggccggg
gcgctacagctccggatcaagaactccatctgtaaaacggttcaatcaaaagtggacacc
attctgcaagatgttgagaagttcacagacattgaaaaactctacttgtaccttaagttg
ccttcaggccccatcagcagcgccagcgtcgagaaaagtgatcagagcgccgtgtcatcc
agccgcacgcagcagatgcatgcgttcaattggatccacaatcatctagaggaataccct
gagacctcgctccccaaacaggaagtttatgacgaatacaaaagcttctgtgacaatctc
aactaccatccactgagtgctgcagactttggcaaaatgatgaaaaatgtcttccccaac
atgaaggcgcgtcgacttggcatgagaggaaaatcaaaatattgctatagtggactgagg
aaaaggccttttgtccactttccgtgtttaccaagtctggagctacagaaaactggagaa
ggatgcgatggactggactcagcagggggctaccttggcagtatgaaggaggaggttcgc
tttgcggcttgtgatttggtgtgcgagtgggctcaaaaggtgctgaaacggcctttcgag
gcagtggaagagctggctcgcttcctgatggacagccactacatcagcaacaagtccctg
gcagctctcaccattatgacaggcgcggcaacagaagttaagcctctgcaggcagtctca
gcttttgtgccgaccgctgacgcacacagtttccagcctcaaacggcaactctgtcatcg
ccaactgtcgacgccaagcagcagctccagaggaagatccagaggaaacaacaagaacaa
aagctgcactcacccataccaggagagggtccaatcaagacgacagatgatggcagcggc
caatgtggtagcccagtctctccttcagctcagccgaccattggtatcgtggtcgctgct
gtcccaagacccgtcacgacacaacaaagcggccagctgatgtctgccagtccagtgggg
accggggagagcaaattgctgcctataaacttccaagtggtgacgcagacagttcagccc
ccgaaacaaagcgccaagagctccgtaaatattctcccaagtccagtcggggaacgctca
gctcgtccacgctatcctcaaatccttcccaagccggcgaccagcaatgctatcgctctg
tgctcgccctccaccatgctcattggcaacaaccccatcaagactgtgatgaccacttgt
catgttagtcctgtcagtctggtcaagatgacagccatctcactcgcaccccacagcggc
aatgccaccacttcccttacgaacaccactttgaggccggcatctgcaggtatcagtagc
tgcagcctgtcagaggacatcctgagatcccatcaaaatacgaggagtacctccgccctc
cccattctggccccgcaggttgacgcccatgatattgatgtcgaaatggaggtcgaaggg
atacacatgaatagagaaaaacaaattgtgagcagtgtcacgatggcgcagagggctgct
agcgtcccaatacctcaaactaaaggcttccacactatggaaaccacatccagctcaaaa
tatgatgcaaatgtccccgtgacaaccaacgccgcagcagtcgttaacaacacgccaact
aatatgagatctctgaatttagctccctcctgtccgaatatgcgagttatctcaacatac
aacagcaacccagcatcttcatttggggaaggaatctgtgcagctaagagcttccggaag
cgctcgggcctcagtccggccccctctcctgtcaagagggcttttctgtccccacaccca
gaagagggcaccgctggccttggatacgacagtcggagacccgagagtgcgccagtcgcc
cgggagatggagatgaaaatgatgaaaatgagctcttttctgcccggtcaagtcaataca
attggcaatgcctcttccagagccagcggctttgtcactgttgccaaaacacagagctca
atgcagaggaaaaacactttcaatgtgatggaaacttgtaccggtgttggccaccctata
acgcagcaaccggaggagcacctgatgtccgacgcgtataccttagcggataattcaaat
tcgtcagcaggtctacgacaccttcagccgcagagctacgctcaagccgtttccggacca
ctggattttttggaccgagcctccacgtcaagccaactccctatgcagacagaaatcgaa
tacttcccttttgacgatgatgttactcaagacagcatcgtggaagaactggtccagatg
gaagagcagatgaaactgaataaacaagagtttggaaacagcgtcacactgcaagcgcag
caggccgtgatgacgcacaacaccatgtccgccaatcagacattgaatactttttaccgt
gccactaacagcagcggcctcagcaatctagtccaaacaccgacacccacgcccacgtcg
gaaatgacgggtgttcaaggtttgaccagagagagcccccgctcgcgtatcacccccata
acgccggtcgacagtgccccgggaagcagtcgacacactccggtcggcactccgctctcc
agctgcagcagcactgtgcctcccagccctgtggagtgcaggaatccctttgcgttcaca
cccatcaactccagcgttacgagtttccacgacagcggcgccgtctccagcagccccgtc
aagcccatgcagaggccaacggccacccacccggacaagaccaggctggactggatgaat
aatagctacagcggcaacgggagcctaaataaatcgaacaacgccgtgggaattttacca
agctatcagggcctcattgatgaccactttcaaaagcctcacgccttcgccgtcccccac
gcaaggcaccacgacagccgttttggccggttgactccaatatcccccgtgcagcagcag
gtagccagcatggccggcgcgaccaagcaggagggcttcgccgtgcccgctcctctggat
aacaaaggcagcaaccttcccgcgagtggatcttttcgatgtcgcagtgttagccccgcc
atacaccagaggaacttggtggcgagcacagcagccagtggccttcacaatatccaccag
cagtgcgtctccccgtttaactcaccggtaacgcctgagatgttaaacatctttgccaac
aaccagggaaatctcggggtgagcagcgtggctcaaaggagtcgctccgtgccactcaac
atcatgatgcagacggaagttccgccgatgacaggccagcaatgcggcggcatgaatatc
actgacgtccttctgggtaagctggacggggaccacgacaccgcacgaggtatgggcatg
aataatatgccttcgagctacacggcgcggatgaatctcactcagatcctcgagtctggg
aatgtcagcccgatcgctcttgactcctccggcacaccaaggcccaattacctcactagt
gaacaaatgttttcctctgcaacacagtcggcctctgaggggcagcatcagcagcatcag
cagcatcagcagcatcagcagcatcagcagcatcagcagcatcagcagcatcagcagcat
cagcagcaggcgacacggcaacagcagttgggtttcagccacacttttaaaggcgtccaa
ccggacagcaaccttgccgccggcaatcagctggtgcaacaggttccggggttagcggca
ggcggggcagattttccatgtgaacttcgaatgacttcggacctgtccggtagcatcaat
gacctgaatacgctggatgccaaccttctctttgaccccggtcgtcagcaagggcaattt
caaagcgccgctccggaggagatggctaatcagccgctgtttcagcaaatcaccagcgac
gccacgcattctggtgggctcgagtggctcgagagcaaagatcacacgactgtcgggctg
atgggatga
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