KEGG   Syngnathus scovelli (Gulf pipefish): 125966759
Entry
125966759         CDS       T08785                                 
Name
(RefSeq) DNA-binding protein RFX7
  KO
K09175  DNA-binding protein RFX7
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sscv03000]
    125966759
Transcription factors [BR:sscv03000]
 Eukaryotic type
  Other basic domains
   RF-X
    125966759
SSDB
Motif
Pfam: RFX5_N RFX_DNA_binding Pox_D5 Cdc6_C DUF5308
Other DBs
NCBI-GeneID: 125966759
NCBI-ProteinID: XP_049573131
LinkDB
Position
4:14733357..14745033
AA seq 1382 aa
MAEEDPQQQQQQQQHQQHADRGAGSFQPGLLSGLQSAEAGALQLRIKNSICKTVQSKVDT
ILQDVEKFTDIEKLYLYLKLPSGPISSASVEKSDQSAVSSSRTQQMHAFNWIHNHLEEYP
ETSLPKQEVYDEYKSFCDNLNYHPLSAADFGKMMKNVFPNMKARRLGMRGKSKYCYSGLR
KRPFVHFPCLPSLELQKTGEGCDGLDSAGGYLGSMKEEVRFAACDLVCEWAQKVLKRPFE
AVEELARFLMDSHYISNKSLAALTIMTGAATEVKPLQAVSAFVPTADAHSFQPQTATLSS
PTVDAKQQLQRKIQRKQQEQKLHSPIPGEGPIKTTDDGSGQCGSPVSPSAQPTIGIVVAA
VPRPVTTQQSGQLMSASPVGTGESKLLPINFQVVTQTVQPPKQSAKSSVNILPSPVGERS
ARPRYPQILPKPATSNAIALCSPSTMLIGNNPIKTVMTTCHVSPVSLVKMTAISLAPHSG
NATTSLTNTTLRPASAGISSCSLSEDILRSHQNTRSTSALPILAPQVDAHDIDVEMEVEG
IHMNREKQIVSSVTMAQRAASVPIPQTKGFHTMETTSSSKYDANVPVTTNAAAVVNNTPT
NMRSLNLAPSCPNMRVISTYNSNPASSFGEGICAAKSFRKRSGLSPAPSPVKRAFLSPHP
EEGTAGLGYDSRRPESAPVAREMEMKMMKMSSFLPGQVNTIGNASSRASGFVTVAKTQSS
MQRKNTFNVMETCTGVGHPITQQPEEHLMSDAYTLADNSNSSAGLRHLQPQSYAQAVSGP
LDFLDRASTSSQLPMQTEIEYFPFDDDVTQDSIVEELVQMEEQMKLNKQEFGNSVTLQAQ
QAVMTHNTMSANQTLNTFYRATNSSGLSNLVQTPTPTPTSEMTGVQGLTRESPRSRITPI
TPVDSAPGSSRHTPVGTPLSSCSSTVPPSPVECRNPFAFTPINSSVTSFHDSGAVSSSPV
KPMQRPTATHPDKTRLDWMNNSYSGNGSLNKSNNAVGILPSYQGLIDDHFQKPHAFAVPH
ARHHDSRFGRLTPISPVQQQVASMAGATKQEGFAVPAPLDNKGSNLPASGSFRCRSVSPA
IHQRNLVASTAASGLHNIHQQCVSPFNSPVTPEMLNIFANNQGNLGVSSVAQRSRSVPLN
IMMQTEVPPMTGQQCGGMNITDVLLGKLDGDHDTARGMGMNNMPSSYTARMNLTQILESG
NVSPIALDSSGTPRPNYLTSEQMFSSATQSASEGQHQQHQQHQQHQQHQQHQQHQQHQQH
QQQATRQQQLGFSHTFKGVQPDSNLAAGNQLVQQVPGLAAGGADFPCELRMTSDLSGSIN
DLNTLDANLLFDPGRQQGQFQSAAPEEMANQPLFQQITSDATHSGGLEWLESKDHTTVGL
MG
NT seq 4149 nt   +upstreamnt  +downstreamnt
atggccgaggaggacccccagcagcagcagcagcagcagcagcatcagcagcatgcagac
cgaggggcgggcagcttccagcctggtctcctctccgggctgcagagcgccgaggccggg
gcgctacagctccggatcaagaactccatctgtaaaacggttcaatcaaaagtggacacc
attctgcaagatgttgagaagttcacagacattgaaaaactctacttgtaccttaagttg
ccttcaggccccatcagcagcgccagcgtcgagaaaagtgatcagagcgccgtgtcatcc
agccgcacgcagcagatgcatgcgttcaattggatccacaatcatctagaggaataccct
gagacctcgctccccaaacaggaagtttatgacgaatacaaaagcttctgtgacaatctc
aactaccatccactgagtgctgcagactttggcaaaatgatgaaaaatgtcttccccaac
atgaaggcgcgtcgacttggcatgagaggaaaatcaaaatattgctatagtggactgagg
aaaaggccttttgtccactttccgtgtttaccaagtctggagctacagaaaactggagaa
ggatgcgatggactggactcagcagggggctaccttggcagtatgaaggaggaggttcgc
tttgcggcttgtgatttggtgtgcgagtgggctcaaaaggtgctgaaacggcctttcgag
gcagtggaagagctggctcgcttcctgatggacagccactacatcagcaacaagtccctg
gcagctctcaccattatgacaggcgcggcaacagaagttaagcctctgcaggcagtctca
gcttttgtgccgaccgctgacgcacacagtttccagcctcaaacggcaactctgtcatcg
ccaactgtcgacgccaagcagcagctccagaggaagatccagaggaaacaacaagaacaa
aagctgcactcacccataccaggagagggtccaatcaagacgacagatgatggcagcggc
caatgtggtagcccagtctctccttcagctcagccgaccattggtatcgtggtcgctgct
gtcccaagacccgtcacgacacaacaaagcggccagctgatgtctgccagtccagtgggg
accggggagagcaaattgctgcctataaacttccaagtggtgacgcagacagttcagccc
ccgaaacaaagcgccaagagctccgtaaatattctcccaagtccagtcggggaacgctca
gctcgtccacgctatcctcaaatccttcccaagccggcgaccagcaatgctatcgctctg
tgctcgccctccaccatgctcattggcaacaaccccatcaagactgtgatgaccacttgt
catgttagtcctgtcagtctggtcaagatgacagccatctcactcgcaccccacagcggc
aatgccaccacttcccttacgaacaccactttgaggccggcatctgcaggtatcagtagc
tgcagcctgtcagaggacatcctgagatcccatcaaaatacgaggagtacctccgccctc
cccattctggccccgcaggttgacgcccatgatattgatgtcgaaatggaggtcgaaggg
atacacatgaatagagaaaaacaaattgtgagcagtgtcacgatggcgcagagggctgct
agcgtcccaatacctcaaactaaaggcttccacactatggaaaccacatccagctcaaaa
tatgatgcaaatgtccccgtgacaaccaacgccgcagcagtcgttaacaacacgccaact
aatatgagatctctgaatttagctccctcctgtccgaatatgcgagttatctcaacatac
aacagcaacccagcatcttcatttggggaaggaatctgtgcagctaagagcttccggaag
cgctcgggcctcagtccggccccctctcctgtcaagagggcttttctgtccccacaccca
gaagagggcaccgctggccttggatacgacagtcggagacccgagagtgcgccagtcgcc
cgggagatggagatgaaaatgatgaaaatgagctcttttctgcccggtcaagtcaataca
attggcaatgcctcttccagagccagcggctttgtcactgttgccaaaacacagagctca
atgcagaggaaaaacactttcaatgtgatggaaacttgtaccggtgttggccaccctata
acgcagcaaccggaggagcacctgatgtccgacgcgtataccttagcggataattcaaat
tcgtcagcaggtctacgacaccttcagccgcagagctacgctcaagccgtttccggacca
ctggattttttggaccgagcctccacgtcaagccaactccctatgcagacagaaatcgaa
tacttcccttttgacgatgatgttactcaagacagcatcgtggaagaactggtccagatg
gaagagcagatgaaactgaataaacaagagtttggaaacagcgtcacactgcaagcgcag
caggccgtgatgacgcacaacaccatgtccgccaatcagacattgaatactttttaccgt
gccactaacagcagcggcctcagcaatctagtccaaacaccgacacccacgcccacgtcg
gaaatgacgggtgttcaaggtttgaccagagagagcccccgctcgcgtatcacccccata
acgccggtcgacagtgccccgggaagcagtcgacacactccggtcggcactccgctctcc
agctgcagcagcactgtgcctcccagccctgtggagtgcaggaatccctttgcgttcaca
cccatcaactccagcgttacgagtttccacgacagcggcgccgtctccagcagccccgtc
aagcccatgcagaggccaacggccacccacccggacaagaccaggctggactggatgaat
aatagctacagcggcaacgggagcctaaataaatcgaacaacgccgtgggaattttacca
agctatcagggcctcattgatgaccactttcaaaagcctcacgccttcgccgtcccccac
gcaaggcaccacgacagccgttttggccggttgactccaatatcccccgtgcagcagcag
gtagccagcatggccggcgcgaccaagcaggagggcttcgccgtgcccgctcctctggat
aacaaaggcagcaaccttcccgcgagtggatcttttcgatgtcgcagtgttagccccgcc
atacaccagaggaacttggtggcgagcacagcagccagtggccttcacaatatccaccag
cagtgcgtctccccgtttaactcaccggtaacgcctgagatgttaaacatctttgccaac
aaccagggaaatctcggggtgagcagcgtggctcaaaggagtcgctccgtgccactcaac
atcatgatgcagacggaagttccgccgatgacaggccagcaatgcggcggcatgaatatc
actgacgtccttctgggtaagctggacggggaccacgacaccgcacgaggtatgggcatg
aataatatgccttcgagctacacggcgcggatgaatctcactcagatcctcgagtctggg
aatgtcagcccgatcgctcttgactcctccggcacaccaaggcccaattacctcactagt
gaacaaatgttttcctctgcaacacagtcggcctctgaggggcagcatcagcagcatcag
cagcatcagcagcatcagcagcatcagcagcatcagcagcatcagcagcatcagcagcat
cagcagcaggcgacacggcaacagcagttgggtttcagccacacttttaaaggcgtccaa
ccggacagcaaccttgccgccggcaatcagctggtgcaacaggttccggggttagcggca
ggcggggcagattttccatgtgaacttcgaatgacttcggacctgtccggtagcatcaat
gacctgaatacgctggatgccaaccttctctttgaccccggtcgtcagcaagggcaattt
caaagcgccgctccggaggagatggctaatcagccgctgtttcagcaaatcaccagcgac
gccacgcattctggtgggctcgagtggctcgagagcaaagatcacacgactgtcgggctg
atgggatga

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