Syngnathus scovelli (Gulf pipefish): 125966760
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Entry
125966760 CDS
T08785
Symbol
nedd4a
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4 isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04120
Ubiquitin mediated proteolysis
sscv04144
Endocytosis
sscv04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125966760 (nedd4a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125966760 (nedd4a)
09144 Cellular community - eukaryotes
04530 Tight junction
125966760 (nedd4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125966760 (nedd4a)
04121 Ubiquitin system [BR:
sscv04121
]
125966760 (nedd4a)
03029 Mitochondrial biogenesis [BR:
sscv03029
]
125966760 (nedd4a)
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125966760 (nedd4a)
Membrane trafficking [BR:
sscv04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
125966760 (nedd4a)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
HECT type E3
125966760 (nedd4a)
Mitochondrial biogenesis [BR:
sscv03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
125966760 (nedd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
125966760
NCBI-ProteinID:
XP_049573132
LinkDB
All DBs
Position
4:14746200..14766404
Genome browser
AA seq
1225 aa
AA seq
DB search
MAHRLRLDFASRRSHTDPLSECLSSHGEESGVILSADSLAESLAHSSLHFKVTSPSPDYG
NLQRYSSVLIPRVNAKGCSQKSVVQIALQPCGTLSGDLDCTVGEGDPASSETGAIASSDG
GSCSSSMASDAGYWSSNSIFEPETPEKHRTTQEKSVLCCKSKVPLRRCSSLVIFPKSPCS
TPPASPVNLIALPAFFGTRAPLQTPAADSSRDEEEMTCKESATSTSSQHCLKGDPAPECR
DTKHMVHFNIPLQDKPKCKVEGGNDVMEQSPSNDKSHHRSRSVLLHFAHQRPSLCGVKAE
CPDAPSFLAEPETPRDPKKKLYRSTSACLFSSVKPSEEKLLAKGHEKLEKNNCHRAIQRS
FSLEVPYANTGISCHVSNTKLGSTCSPHVHIHLSPCGPTTLPSLPNDADASCKGSNSTKN
SSQSAETRDDFLGQVDIPLSQIPTNNSSYGRPYTFKDFLLHPRSHKSRVKGHLRLKMTYM
PRNSDSAEEPTDQNDNTDPPWEFLESQDMSGPMQSEQTPVLPPGWEERQDNLGRTFYVHH
ESRTTQWRPPALHDNNADTRRQNTARQRAQSYITRRQISDPDETTARDEEWEVFREDDVN
LSQANQVTLPPPPNPPEAQMLVEELRNLYSQGGTTREHQVDHACNSSHSVRARTVHLSTS
EELPVNSVPVQTSAALPTGWEEKRDTKGRRYYINHNTRTTSWIRPALHRTNSTPAASRNS
ASTPSFQSATLQPSPQYTPSPEAASESGSMPAGWEVRSAPNGRPFFIDHNTKTTTWKDPR
LTTPVHVRRRASLDPSDLGPLPPGWEERVHTDGRIFYIDHNTKITQWDDPRLQTSAITGP
AVPYSRDYKQKYDYFRKKLEKPVNIPNKFSIKVRRNAVLEDSYRQILVVKRADLLKAKLW
VEFEGEKGLDYGGLAREWFFLMSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLTY
FKCIGRVAGMAVWHGKLLDAFFIRPFYKMMLQKSITLQDMESVDSEYFNSLKWILENDPT
DLDLMFTIDEELFGQTHQHELKPNGAEIVVTNENKKEYIHLVMQWRFVNRIQKQMTAFKD
GFFELIPQDVIKIFDENELELLMCGLGDVDVNDWRQNTKYKSGYNADHAVIHWFWKAVLL
MDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQRFTIELWGTRDKLPRAHTCFNRLDLP
PYESFEELREKLNIAIENAQGFEID
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atggcacaccggctccgtttggactttgcgtcaaggagaagccacaccgaccctctgtca
gagtgcctcagcagccatggtgaggagagtggagttattttgtcagctgatagcctcgca
gagagtctggcgcacagttctctacacttcaaggtgacttcgccgtcacctgactatgga
aatttacaacgatattcttcggtattgattccgagggttaacgcaaaaggatgtagtcaa
aaaagcgtcgtgcagatagcactacagccctgcggcacgctcagcggggacctggattgc
accgtaggggaaggagatcccgcgagtagtgaaacgggagcgattgccagctctgatggg
ggttcgtgtagcagcagtatggccagcgatgccggatactggagtagcaacagcatcttt
gagccagagactccagaaaaacacaggaccactcaagagaagagtgttctctgctgcaag
tccaaagttcccttgagacgttgttcctccttggttattttccccaaaagcccctgcagc
acgccacccgcatctccggtaaacctaatcgctcttcctgctttctttggaacgagagct
cctctccagacacctgccgctgattcctcacgggatgaagaggaaatgacttgtaaagag
tcggccacatctacaagtagccaacattgtctcaagggagaccctgcacctgaatgtcgg
gacaccaaacatatggtccactttaatattcctctccaagacaaacctaaatgcaaagtg
gagggcggcaacgatgtgatggagcagtcaccgtcgaacgataaatctcatcatcgctca
agaagcgttctgctacactttgcccatcaaagaccatcattgtgtggagtcaaagccgaa
tgtcccgatgctccctccttccttgcggagcctgagactccacgcgaccccaagaaaaaa
ctctaccgtagtacctcagcttgtttgttctcctcggtgaaaccgtcagaggaaaaactc
ttagcaaaaggacacgaaaagttggagaaaaacaattgtcatcgtgccatacaacggagc
ttttccctggaggtgccctatgcaaacacgggcatttcatgtcacgtttcaaacaccaaa
ctcggtagtacgtgctcgccacacgtacatattcatctgtctccgtgcggcccgactacg
ttgccgagcttaccgaacgatgcagacgcaagctgcaaaggaagcaatagcacaaaaaac
tcaagtcaaagtgctgagacgcgtgatgactttctgggacaggtggatattcctctcagt
cagataccaacaaataattcatcatatggaaggccatatacattcaaggattttctgctt
catcccagaagtcacaagtccagagttaagggccatctgcgactcaaaatgacatacatg
ccgagaaactctgattcagctgaagaaccaacagatcagaacgacaacacagatcctcca
tgggagtttttggaatctcaggacatgtcaggccccatgcagagtgagcagacacctgtt
ctgccgcctggctgggaggagcgtcaggataacctgggaagaaccttctatgtccaccac
gagagcaggaccacacagtggaggccaccagccttacatgacaataatgcagacacaagg
cgacaaaacactgcaaggcagagggcgcagagttatattacacgcagacagatctcagac
cctgatgagaccactgcacgagatgaggaatgggaggtttttcgagaagatgatgtcaat
ttgagccaggccaaccaggtcacgttgcctccacctccgaatcccccggaggcacagatg
ttggttgaggagctgagaaacctttatagtcaagggggcacaactcgtgagcaccaggtg
gatcatgcatgtaattcgagccattccgttcgcgcaagaactgttcacttgtcaacatca
gaggagcttcctgttaattcagtgccggttcagacctctgcggcgctgcctacaggatgg
gaggagaagagggacactaaaggaagacgctattatatcaaccacaatacccgaaccacc
tcatggatacgacccgccttgcatagaacaaattcaacccctgcggcttcacgaaatagt
gctagtacaccatccttccagtctgcgacccttcaaccatctccccagtacactcccagc
ccggaagctgcatctgaatcaggctccatgccagctggttgggaagtccgcagtgctccc
aatggaagaccctttttcattgaccacaacacaaagacgactacctggaaagatcccagg
cttacgactcctgttcatgtgagaaggagagcatcacttgacccttctgatcttggccca
ttaccacctggttgggaggagagagtccatacggacgggaggatattctacattgatcac
aacacgaagatcacacagtgggatgatcctagattacaaacctcagcaataactggacca
gcagtgccttattccagagattataaacaaaagtatgactacttccgcaagaagctggag
aaaccagtcaacataccaaataaatttagcataaaggtaagacgaaacgcagtgctggag
gactcgtaccggcaaatcctcgtcgtgaagcgggcggacttgttgaaagcaaagctgtgg
gtggagtttgagggagaaaagggtttggactacggaggcttggcccgggagtggttcttc
ctcatgtcgaaggagatgttcaacccctactacggactctttgaatattctgcaacggac
aactatacactgcagattaatcccaactcgggtctgtgtaatgaggaccacctgacttat
ttcaagtgcattggccgtgtagcgggcatggcagtctggcatggaaaattgcttgatgct
ttcttcattcggcctttctacaagatgatgctgcagaaatccatcactctgcaggacatg
gagtctgtcgacagtgaatattttaattcactcaaatggattttggagaatgatccaact
gacttggacttgatgttcaccattgatgaggaactctttggacagactcaccagcacgag
ctaaagcccaatggcgcagagattgtcgtcactaatgaaaacaagaaggaatacatccat
cttgtgatgcagtggcgctttgtaaaccgaatacagaagcagatgaccgccttcaaggat
ggattctttgagttgatccctcaagatgtgattaagatctttgacgagaacgagcttgag
ttgctaatgtgtggtctgggggatgtggacgtgaacgactggagacaaaacaccaagtac
aagagtggctacaacgccgaccacgcagttatccactggttctggaaagcagtactgctg
atggatgccgaaaaaagaattcgtctcttgcagtttgtgacgggaacctcccgtgtccca
atgaacggttttgcggaactctatggctctaatgggccacagcggttcaccattgagctg
tggggaacccgtgacaaactgccccgagcacacacatgctttaaccgcttggatcttcca
ccttacgagtccttcgaggaactgagggagaaacttaacatcgccattgagaatgcacaa
ggctttgaaatcgattag
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integrated database retrieval system
