Syngnathus scovelli (Gulf pipefish): 125966798
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Entry
125966798 CDS
T08785
Symbol
scml2
Name
(RefSeq) polycomb protein SCMH1 isoform X1
KO
K11465
sex comb on midleg-like protein 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125966798 (scml2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125966798 (scml2)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
125966798 (scml2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
RBR
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
125966798
NCBI-ProteinID:
XP_049573216
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Position
4:complement(11981578..11999994)
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AA seq
680 aa
AA seq
DB search
MGRTPHKDQKEEKKERPSIGAGSALDKSNEPFSWEDYLRETSSIAASPNCFKQSRIPPSN
DFKAGMKLEARDPRNSNSVCIATVMGMMGTRLRLRLDGSDNTNDFWRLVDSSDIQPIGTC
ERNGDMLQPPLGFRMNASSWPMFLLRTLSGAEMAPASAFKKEPVSPIKNYFKPGMKLEAV
DRKNPYLICPATVGEVKGQEIFVMFDGWRGAFDYWCPFDSRDIFPVGWCVLTKHSLQPPG
NFFTLPGALLAPVSSSSTSLTTRRSTSNSSSMMQTSYRLPNPLPPLPVRKGVRGRRPKSQ
TIALLKAAAEAAAAAAVNGASQNPVRSTQLAPRPHRKRGPKPGSKRKPRMVQSLGSSSIP
VSPPETRLSTSHVSVDNHHNNNSNVVCTVCVYVNKHGDYGPHLDRKLVQQLPDHFGPAPV
NAVLQQAVQACVDCTYQPSVLLSFLQSQSHTGGEVIRVRSEHGIRYVKLPSVSSASTVLR
FLENMCQHLESVSLFSSQPFSPFSKNTRFFDRTKSEPLPHTENNASNNDSAKDSVPNARA
PQIAADYRATKRERPYYANHSHTPPPLRRVSSNPSELGQVPTHRRVEAASSTTGPDHATQ
DKESSGNDASSWSVDDVIRFVQEADPHTLGPHVELFRKHEIDGKALMLLRSDVIMKYMGL
KLGPALKLCHHIEKLKQTKQ
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgggccgaacgccacacaaagatcagaaagaggagaagaaggagaggccgagcatcggc
gcaggctctgcgctcgataaatctaatgagccattcagttgggaagactaccttagagag
acctcctccattgcagcctcacctaactgcttcaaacagtccaggatccccccctccaat
gacttcaaggccggtatgaagctcgaggctcgtgacccgcgcaactccaactcggtgtgc
atcgccacggtgatgggcatgatgggtacgcgattacgcctgcgtctggatggcagcgac
aacaccaacgacttctggagactggtggactcttctgacatccaacccataggcacctgt
gagaggaacggggacatgctgcagcccccgctgggatttcgaatgaacgcctcttcgtgg
cctatgtttctcctccgaacgctgagtggagcagagatggcaccagcctctgcttttaag
aaggaacctgttagccccattaaaaactacttcaagcctggtatgaagctggaagccgtg
gacaggaagaacccttacctaatttgtccggccaccgtgggtgaagtgaaaggtcaagag
atcttcgtcatgtttgatggctggcgtggtgcctttgactactggtgccccttcgactcc
agagacatcttccctgttggctggtgtgtgctgaccaaacacagtttacagccgcctgga
aacttcttcacccttccaggtgctcttctcgcccctgtttcgtcttcctcaacctccctc
acaacacgccgctccacttccaactcctcgtccatgatgcagacttcatatcgactgccc
aaccctttgccgcccctgcccgttcgcaagggtgtccgaggtcgccgtcccaagtcgcag
actattgctttgttgaaagcagcggctgaggcggcagcagctgcggcggtcaatggggcg
tcgcagaaccctgtcaggtccactcagttggcccccagaccacacaggaagagagggccc
aagcctgggagcaagaggaagcctcggatggtacagtcactgggctcgtcatcaattcca
gtgtcgcctccagaaacccgattgagcaccagccatgtttcagtagacaaccaccataac
aacaactcaaatgtagtctgcacggtgtgcgtttatgtgaacaaacatggcgactacggc
ccccatcttgaccgtaaactggtgcagcagctcccagaccactttgggccagctccagtc
aacgcagtgctacagcaggccgtccaggcctgtgtggactgtacgtaccagccctccgtg
ctgctgtcgtttctacagagccagtcccacacaggaggagaggtcattcgagtgcgctcc
gagcatggtatccgctatgtcaagcttccctccgtctccagtgcctctactgtgctaagg
ttcttggagaacatgtgtcagcatctggagagtgtcagcctgttcagctcacagcctttc
agccccttcagtaaaaacacacgcttctttgacaggacaaagtcagaaccactgcctcac
acagaaaacaacgcatcgaacaacgattctgcaaaagattccgttcccaacgcacgagcc
cctcagatagcggcagactatcgggcgacaaagagggaacggccgtattacgccaatcac
tcacacacgcctccacctctgcgaagagtcagctccaacccaagtgaactcggacaagtg
cccacacacagacgcgtggaagcagctagttcaacaacaggcccagaccacgccacgcaa
gacaaggaaagttcagggaatgatgcatcttcttggtcagttgatgacgtgatccgattt
gtccaggaggctgacccacacactcttggtccacatgtggagctttttagaaagcatgag
attgacggcaaggccttgatgctgctgcgcagtgacgtcattatgaagtacatgggactg
aaactgggccctgcgctcaaactctgtcatcacattgagaagctgaaacagaccaaacag
taa
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