KEGG   Syngnathus scovelli (Gulf pipefish): 125966808
Entry
125966808         CDS       T08785                                 
Symbol
kdm4b
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sscv03036]
    125966808 (kdm4b)
Enzymes [BR:sscv01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     125966808 (kdm4b)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     125966808 (kdm4b)
Chromosome and associated proteins [BR:sscv03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    125966808 (kdm4b)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H JmjN PHD_2 PHD DUF4537 Tudor_5 PHD-1st_NSD SLX1_C
Other DBs
NCBI-GeneID: 125966808
NCBI-ProteinID: XP_049573229
LinkDB
Position
10:complement(9263801..9281608)
AA seq 1231 aa
MANNTAMDAMVPPHPVPASRPAAQKGLPIQEPTVQNGIPIQEPVLTEIAETVVTSYPIPG
PAATDPQPPQPHIANGLASGSELPQDPLPPPPPPPSCTKNPNCKIMTFRPTMEEFKDFAK
YIVYMESEGAHRAGLAKVIPPEGWKPRKSYEAIEDMVIPAPIMQVVTGQSGLFTQYNIQK
KSMTVGEYRKLANSKKYCTPRHKDFDDLERKYWKNLTFVSPIYGADVSGSIYDEDINEWN
IGHLNTLLDMVEQECGIVIDGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGQSKSWY
CIPPEHGKRLERLAQGFFPGSSQGCDAFLRHKMTLISPSILKKYSIPFDRVTQNEGEFMI
TFPYGYHAGFNHGFNCAESTNFATLRWVDYGKTASQCTCRKDMVKISMDVFVRCLQPDRY
DLWKQGKDIITLDHSRITELSSPELERWRQHRVAYRANLLRRAMHKMKQFRRLKIEEVKV
LAEEGIELNAADYQRQVEEREAQRKQDRENRLAREAMITLEALERRDQEAAEAASRATET
SAQEKAQQQSMTEDGHGMSKTTAITGFQEAFEQFAASRSVLSDDTEEISCDKKTVAQATY
PNMKVTTQVKKSRRHPLTKPPMRSPLSVVKQDPSGSKAELSSPEALKSSMEKQDHLWQNR
SRNFLAEKAFNSAVSILEPYCAVCSLFCPYKKPHNKPTIANDSQRTPIPCHGDRTRPIVP
EMCFSVGTGSTEPLPTSNYIREDGTSVLICCSSCNMQVHASCYGVNPDIVQNKWTCSRCV
VGAWAVECCLCNLRGGALKVTNDNRWVHIICTIAVAEARFLNPSEREPVDVSAVPETRKN
LICVFCYSTSENKNRGACIQCSEENCATSFHVTCAQIAGVVMRPADWPYVVSVTCHRHRE
ATPKPRTPAKITPAKIPKGPTLGQRVIGRNTDSWYYHCTIIGMATQTLYEVNFDDGSYCD
NIYPENITSHDCLHRGPPDVGELIVVSTTDGQDLNASFVKQHTHKFYQVEFQDKSQLLLK
QSEIHLLDQELPKRVRTRLAIPTSQEETSLAHGADGAGAAKRRCLHSTPIPCTSALPSTS
TQHANTPMATISSPHPTTPVATPASMQYSSTSKVPVSQFLSSTSARASTISAPPRAAPML
PEAPMDTGGALSHVLTELNLASDPTLMPQPNPFRCQLNSDPLLSAQSSVLPPPPPVQNTS
DSYTPSSGYVSYMETLLHSHFPQDEAPGTLF
NT seq 3696 nt   +upstreamnt  +downstreamnt
atggcgaacaacacagccatggatgcaatggtgcctcctcatcctgttccagcatcacgg
cctgcagctcaaaaagggcttcccatccaggagccaactgttcaaaatgggattcccatc
caggagccagtgctaactgaaatagctgagaccgtggtgacctcataccccattcctggc
ccggctgccactgatcctcagcctccacaaccacatattgctaatggccttgcctctggt
tctgagctgccccaggatcctctgccgccgccaccaccaccaccgtcctgcactaagaac
cctaactgcaagatcatgaccttccgtccaaccatggaggaatttaaagactttgccaaa
tatattgtctacatggagagtgaaggagctcatcgtgctggtctggccaaggtgattccg
ccggaaggttggaaaccacggaaatcctatgaggccattgaggatatggtgatccctgca
cccatcatgcaagtggtgactggtcagtctggtctgtttacccagtacaacatccagaag
aaatccatgacagtgggcgagtaccgcaagctggccaacagtaaaaagtactgcacacca
cgtcataaagactttgatgacctagagagaaagtactggaagaacctaacttttgtctct
cccatctatggggcggatgttagtggatccatctatgatgaggacatcaatgagtggaac
atcggccacctgaacacgctactcgacatggtggagcaggagtgtggtattgtcatagat
ggcgtgaacactccctatctgtactttggcatgtggaagaccacctttgcctggcacact
gaggacatggatctctacagcatcaactacctgcattttggccagtccaagtcttggtat
tgtatcccaccagagcatggcaaaagactggagagacttgcacaaggtttcttccctggg
agttcccaagggtgtgatgcttttcttcgccacaagatgactttgatctctccatcaatc
ctgaagaaatatagtattccctttgacagggtaactcagaatgaaggggaattcatgata
acttttccttatggctaccatgctggcttcaaccatggtttcaactgtgccgaatccaca
aactttgccactttgcgttgggttgactacggcaaaacagcttctcagtgcacctgccgt
aaagatatggtcaagatctccatggatgtttttgtgcgctgcctccaaccggatcgctat
gatctgtggaagcaaggaaaagacatcataacgttggaccacagtcggatcacagagctg
agcagcccagaattggagcgctggagacagcatcgtgtcgcatacagagccaaccttctg
cggagggccatgcataaaatgaaacaattccgccgtctcaagattgaggaggtgaaggtg
ctggcagaagaaggcattgagttaaatgctgctgactaccagcgtcaagtcgaagagcgg
gaagctcagcggaagcaggacagagagaaccgtcttgccagagaggccatgatcaccctt
gaggccttggagcgtagggaccaggaggctgctgaagctgcctcacgagctactgaaacc
tcagctcaagagaaggcccaacagcagagcatgacggaggatggtcatggaatgtcaaaa
acgaccgccatcactggatttcaagaagcattcgaacagtttgctgcgtcacggtctgtc
ttgtcagatgacacagaagaaataagttgcgacaagaaaactgttgctcaggcaacctac
cccaacatgaaggtgaccacacaggttaagaagagccgacgccaccctcttaccaaacca
cccatgcggtctcctttgtccgttgtcaagcaagatccgagtggttccaaagcagagctt
tcctcacccgaggcactgaaaagcagcatggagaaacaagatcacctctggcagaatcgc
tcccgcaacttcttggctgagaaggcgttcaattctgctgtgtcaatacttgagccatac
tgcgctgtatgctccctcttctgtccttacaaaaagccgcacaataagcccaccattgca
aatgacagccaacgcacccctattccatgccatggagatcgtactcgtccaatcgtccct
gagatgtgctttagtgttgggacaggcagcactgaacctctcccaactagcaactacatt
agggaggatggaaccagcgtcttgatatgttgctcctcatgcaacatgcaggttcatgcc
agttgttatggcgtcaacccagacatagtccaaaacaagtggacatgctctcgatgtgtc
gtaggcgcctgggcagtggagtgttgtctttgcaacttgcggggaggagctttgaaggtt
accaatgacaacagatgggtccacatcatctgtactattgctgtggccgaagctcgtttt
ctcaatcccagtgagagagagccagtggacgtcagtgcagttccagaaacacggaaaaat
ctgatttgcgtgttctgctatagcacgagtgaaaataagaaccgtggtgcgtgcatccag
tgttcagaagagaactgcgcaacatcttttcatgtgacctgcgcccaaattgctggagtt
gttatgagaccagccgactggccttacgtcgtatctgtcacctgtcacaggcatagagaa
gcaactccaaagccacggacaccagccaaaatcacaccagccaaaatccccaagggcccg
acactgggtcaaagggtaattggccgcaacaccgatagctggtattaccattgtaccatc
atcggcatggcaacgcaaaccctctacgaggtcaactttgacgacggctcgtactgtgac
aacatatacccagaaaacataacgagtcatgactgcctgcatagaggtcctcctgatgtg
ggggagttgatcgtggtcagcacgaccgacgggcaagatctcaatgcttcctttgtcaaa
caacacacccacaagttttaccaggttgagtttcaggacaaaagtcagttgttgctaaaa
caatcagagatccatctgctggaccaggaactgcccaagagggtcaggactcgtcttgcc
attcctacatcccaagaggagacttccttagcccatggagcggatggagccggagcagcc
aagcgtcgctgccttcactccaccccgattccgtgcaccagcgctttgccatctacgtcc
acccaacacgccaatacccctatggcgacgatatcttcaccccacccgaccacccctgta
gcaacaccagcatcaatgcagtatagcagcacaagtaaagtgccagtctcacagtttctg
tcctccacgagtgcaagagcatcaacgatatcagcgcccccccgtgctgctcccatgctt
cccgaggctccgatggacacaggcggcgcattgtcccacgttttgacagagttgaacttg
gcctctgacccaacacttatgccccagcccaaccctttccggtgccagttgaactcggat
ccccttttgtcggcacaatcctctgtactgcccccgcccccacccgtgcagaacacgtca
gacagctacacaccgagcagcggctacgtctcctacatggagaccctcctgcattcacat
ttcccccaggacgaggcgccaggaactctgttttag

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