Syngnathus scovelli (Gulf pipefish): 125966840
Help
Entry
125966840 CDS
T08785
Symbol
igdcc4
Name
(RefSeq) immunoglobulin superfamily DCC subclass member 4 isoform X3
KO
K22657
immunoglobulin superfamily DCC subclass member 4
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sscv04515
]
125966840 (igdcc4)
Cell adhesion molecules [BR:
sscv04515
]
Immunoglobulin superfamily
DCC/UNC5 family
125966840 (igdcc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Ig_RIMBP2
C2-set_2
NDNF
SusE
Ig_ILCR1
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
125966840
NCBI-ProteinID:
XP_049573278
LinkDB
All DBs
Position
4:complement(18399204..18440757)
Genome browser
AA seq
1201 aa
AA seq
DB search
MAVESTPWLICVLLLFCAPSKQDKPVSVELSCGAGPSHVVLEPGSPLTLDCNLGASDTPL
NITWLHEGQPLPPEGSDSRQYVSDSSLLLLLFAEDGASPRALEGGYSCMSTSAHGALTSR
TVNVLLASLSSFRQEPSLQTVPAGGAARFECQIDGVPTPVITWEKDKVTVPQDPRFISLP
NGVLQILEVTREDEGAYRCVASNSAGRDISHASRLTVSTGSAEALNRVTIVAPPQNATVV
LGRPAVMECMAQGQPKPLVSWSRLDGKPISTDVVVLATNLVIRDTRSHHGGIYVCRANKP
RTREFVTAAAVLHVPAPPVILQPPETVSLSRGNTARFVCNSSGEPTPVLRWLKNGKPIRS
LRRAKIQNPGVLLINQLALEDAGYYQCIADNGLGTACATAKLTVIVREGLPSPPQRLSVT
PYSSTTALLMWEKPEYNSDQIIGYSVHCQRAADTDNVEYQFAMNNDTTEYLVRDLLPHTA
YAFFVVAYSPMGASRPSLPVTVDMLEDVPSAPPQLSIASTSPTDISLMWHPLSSQYSRGA
VTSYRIEYSSLDNADTVFSVEVGGNETQFTLRELQPNQAYRLRIAAGTGVGFGVPSEWAQ
HQTLAQYNHTSHRMVMFAPTELQVRAQANKLNVTWQPSPNHTAVSGYKLTCREVDADGEK
TTQTHVVRLRKKTRYHLLTGLVPDQQYEVRVWAFNKQADGSAAVWKGRTEKADKASSLPM
RPPPLPPSSIQATANSSTSIRLRWEKPRFSTVRIINYTVRCSPAGTTNASLVTYHTSAAQ
EILIGALKPFTRYELAVQSNGIDAVGPFSGIVEESTFTDRPSSPPQELRLTTIDSSSVLV
SWRPPLEPNGVIIGYRILFSSNLSQPEHMWTNLSQDGSITSIAVRGLSSGTHYFFKLGAS
TEVGAGPYSLVKDTHTPPDQYELDIHAVTGIIVGVCLGLICILLCMCFSFRNTKTSGGSG
GLDSTAVTPQYRRGGYPSPSRAPECGDCHELETLMPSTGQESSAEAPEEQSLMAAWNGSI
SHNWANRITRYRDTVTEDSPGFIAGEPGVTNNADCLSASPSNNQVEAEVIVHSEISDPPG
EKVKADCQRVKDCKATRGPSLEQTEENLPGKQSGPSQQSPISPAAEEPEAVLAGLKRDSA
LTNGFHSPKSPRPLPKSGENGDVRCCPSAQAKTKSSSLTPVPFVTSGLVHPTSVAHGYLC
P
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagagcaccccttggctcatctgtgtgcttttgctcttttgcgctccatcc
aagcaagataagcctgtttcggtggagctgagctgtggagccggacccagccatgtggtg
ttggagccggggtcccctctcacactggactgtaatctgggggccagtgacacgcccctc
aacatcacctggctgcacgagggccagcccctccctccggagggtagcgactcgcggcag
tatgtcagcgacagctcccttctcctgctgcttttcgccgaggatggagcgtcccctcgg
gctctggagggaggctacagctgtatgagcaccagtgcacatggagccttgaccagccgg
accgtcaatgtgctgctggcgagtctgtcatccttccgtcaggaaccttcacttcagaca
gtgcctgctgggggggctgctcgctttgagtgccagatcgatggggtgcccacacctgta
attacttgggaaaaggacaaagtcactgtcccccaggacccaaggttcatttcccttcct
aatggtgtgctccagattctggaggttaccagggaggatgagggcgcctaccgctgcgtt
gcatccaactctgccgggagggatatcagtcacgcgtcccggctcactgtcagcacaggc
tccgcagaagccctgaacagagttacgatcgtggctccgcctcagaacgcaacggtggtg
ctcggccgtccagccgtgatggagtgcatggcgcagggccaacccaagccgctggtgtcc
tggagcagactagatgggaagcccatttccacagacgtggttgtcctcgcgactaacttg
gtgatcagagacacgaggagccaccatgggggaatctacgtgtgcagggccaacaagcct
cgcaccagggagtttgttaccgctgctgctgtactgcatgtgcctgcccctccagtcatt
cttcagccaccggagacggtgtctctctcccggggaaacacggccaggtttgtgtgcaac
agctccggagagcccaccccggtgttgcgctggttgaagaacggcaagccaatccgctcc
ctgcgtcgtgccaagatccaaaatcccggcgtcctgcttatcaatcagctggcactggag
gacgccggctactaccaatgcatcgccgacaacggcctgggcaccgcctgcgccaccgcc
aaactcactgtcattgtgagggagggcctccccagcccacctcaacgcctctcggtaacc
ccttactccagcaccaccgccctgctcatgtgggagaaaccagagtacaactcggaccaa
atcatcggctactctgtgcactgccagcgagccgcagatacagacaacgtggagtaccag
tttgcgatgaacaacgacaccacggaatatctcgtcagggatcttctcccccacacggcg
tacgccttcttcgtggtggcctactcccccatgggagcaagtcgcccgtccctgcccgtt
actgttgacatgctcgaggacgtgccgagcgcgccccctcagctgtcaattgccagcacg
tcgccgacggacattagtttgatgtggcatccgttgtcctcgcagtatagtcgaggggcc
gtcaccagctaccgtatcgagtatagctctcttgataatgcggacaccgtcttctcagtg
gaggtgggcggtaatgagacccagttcacgctcagggagttgcagcccaaccaggcatac
agattgagaatagcagctggaacaggtgtcggcttcggggtcccgtccgagtgggctcag
caccagacgttggcccagtacaaccacaccagccaccgcatggtgatgttcgctcctact
gaactgcaagtgcgagcgcaagctaacaagctcaacgtcacatggcagccctcgccaaat
cacacggctgtgtcgggctacaagctaacctgccgagaggtggacgccgacggggagaag
acgacccagacacacgtggtcaggcttcgtaaaaagaccagataccatctcctcaccgga
ctggttccagaccagcaatatgaagtgagagtctgggcgttcaacaagcaagcagatggt
tctgctgcagtgtggaaaggaaggaccgaaaaggctgataaagcatcctcgctacccatg
cggccgccccctttaccaccgagcagcattcaggcaacggccaacagttccacatcgatc
cgactccgctgggagaaacctcgcttcagcacggtgcgtatcatcaactacacggtgcgc
tgcagcccggccggaaccaccaacgcctcgctggtcacatatcacaccagtgctgctcaa
gagattctgattggggcgctgaagcctttcacccgctatgagctggccgtgcaatccaac
ggcatcgatgccgtgggacccttcagcggcatcgtggaagagtccaccttcactgacagg
ccttcctcgccgccgcaggagctgcgcctgaccaccatcgactcgtcctcagtgctggtg
agctggcggcctccgctggagccaaacggtgtcatcataggctacaggatcctgttcagc
agcaacctgagccaacctgagcatatgtggacgaacctttctcaggatggcagcatcacc
agtattgcggtgcgggggttatccagtggcacccattactttttcaagttgggagcatcc
acagaggttggagccggcccttattctcttgtaaaggacactcacacacctcctgaccaa
tacgagctggacatccatgcagtgacaggcatcatcgttggagtgtgtctgggactcata
tgcatccttctctgcatgtgtttcagtttccgcaacacaaagaccagtgggggatctggt
ggcctggactccacagctgtgaccccccaatacaggagagggggctacccaagtcccagc
cgcgcaccagagtgcggcgattgccacgagctggagacgctaatgccctccaccggccaa
gagtcgtcggcagaagcccccgaggagcagagcctgatggctgcttggaacggctccatc
agtcacaactgggccaatagaatcacccgatacagagataccgtcacagaagactcaccg
ggattcatcgctggggaacccggtgtgacaaacaatgcggattgtctgagcgcatccccg
tccaataaccaggtggaggccgaggtcatcgtccactcggagatctccgacccgcccggt
gagaaggtcaaggcggactgccagcgggtcaaggactgcaaagccacccggggcccttcg
ttagaacagaccgaggagaaccttcccggtaaacagtcggggccgagccagcaaagtccg
ataagtccggcagccgaggaacctgaggcggttctcgccggcctgaagcgtgactcggca
ctgaccaacggcttccactcgccaaagtcgccgcggcccttgcccaaatctggggaaaac
ggggacgttcgatgctgcccttcagcacaagcaaagaccaagtcttcgagtctcaccccg
gttcctttcgtcacttcaggcctggtccaccctacctcagtagcacacggttacttgtgc
ccgtag
DBGET
integrated database retrieval system
