Syngnathus scovelli (Gulf pipefish): 125966841
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Entry
125966841 CDS
T08785
Symbol
cgnl1
Name
(RefSeq) cingulin-like protein 1
KO
K21110
cingulin-like protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125966841 (cgnl1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_tail_1
Filament
CCDC113_CCDC96_CC
CENP-Q
Motif
Other DBs
NCBI-GeneID:
125966841
NCBI-ProteinID:
XP_068506543
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All DBs
Position
4:complement(14639143..14661833)
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AA seq
1297 aa
AA seq
DB search
MESYRVTGIPTSGPQQSYTQASRSSRPYGNGGTYGLSIRVQGIDGHPYVVLNNQDRGPQP
FIDPDSNGYIETEGSFIENYHEYEFRGDKEGGPKSPFEEYRSQMMQYAASQNGSADTQAR
KAQALLNFQRHPEILQPYDPETNSLNFNSPPSRPLSLAETGTQSTSTVSTPYHNRSSSLD
RNKAPAQSNKTQPPSPRLAETSYQNSKLPSQSLGPTQHSQPQPKPQLAQPQSKPRLSNQT
SPQSKSSLKSHTQASTVSSPTSEQKKAQYKSPTSVSSANSSLDRKHREPDVLPLRRSDSS
GPVLQLSSRSRHSSSSSTSKPYADDSLDALYADTINRHENRRYIPFVPGSGRDIDKGSIP
GVDELIEKFDGKDGSYHRRGRAGRRNRISPEDRTRSHSVDSAFGWVEGSRPLDETSRRRG
TSMEHVLRPSQLRMERAAGNQDPWFMISPKATSRVTSAPGSPQSTMSKGVGYIQGYQKSH
QSHSADVTLKNRDSVDSASSTGKLSTSLSKSATGGKKVSADTDVQATPDLLKGQQELSQQ
THEETAKQILFNYLKDGSTDNDETTKRKVNLVFEKIQTLKSRATAGPPDEKALGLSAQTK
ALQEQNTALEKRMAELKQQLQEQRMKNKTDSTAASRLKELQRELDRTTDECKSLKEKLAK
TEAELQSTLEELFQVKMEREQYQTEIRDLQDQLSEMHDELDTAKTTTAGDDEREAIMADI
MQLKMELQEVLVAKEEQEDVLRKRERELTALKGALKAEVAAHDQEMDKMKEKYEKEISRL
HRSLEETKQSSTAVVQEKAEMEAAKGTLEGQADRLSQEVERLRKRAQELENEVAKLNRII
DEAKLQESRLGDRVARMEKEKKQLEESLNEIKEQEEEMSRANRALTLRLEDVQRNFSKMS
GEHKQLEERLQEEKLQKEQFKNMKNDIEDERRLLDRTVEKLQKEMNDIVDASQSSTRELQ
EQIDIYKEKNRRELTELQKLLKERGQELDKYLLAAQTLQEELLRREDDLRRCEQERDEAV
LNEKMLENKVNELEAAVKTNTHSKDDKTRQFKLMEDRITQLELDLDEERQNGDQLMDRLD
RGREQVDQMRNELMQERAGRQEAECDKMALERQSKDLKNKLADLEGSQKSSKVGQVAQLE
DRIHELEERLEAEERERANLQLSNRRLERKVKEVMMQVEEEHHSMQDQKDQLNLRLKALK
RQMDEAEEEIDRLEHSKKKLQRDLDEQQETNEQLQNQLKSLRSEMRRKSTSAPLLNNLDD
DDDDDDDISTDGETYFSSTSSYKRSSSQDNLLSTFSM
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atggagtcctacagagtgacgggcattcctactagtggaccacagcagagttacacccaa
gcatctcgctcctctcgaccctacggcaatggcgggacatacggtctgagcatcagagtc
cagggtatagatggacatccctatgtggttctgaataaccaggacagaggtcctcagccc
tttattgaccctgatagcaatggctacattgaaacagaaggctcttttattgaaaactac
catgagtatgaatttcgaggagacaaggagggtgggcccaagagcccctttgaggagtat
agatctcagatgatgcagtacgctgcctctcaaaatggctctgcagatacacaagcaagg
aaagcgcaagcgcttctgaactttcagaggcatcccgagatattgcagccctatgatcca
gagaccaattctctgaactttaacagtccaccttcaaggccgctttctcttgctgagacc
ggaactcagtccacatccactgtctccacaccataccacaacaggtcttctagcctagat
cggaacaaagctcctgcgcaatcgaacaaaactcagcctccgtctccgcgcttggctgag
acatcataccaaaactccaaattaccttctcagtctttgggtccaacccagcattcccag
ccacagcccaagccgcaattagctcagccgcagtccaaacctcgcctcagcaaccagacg
tcacctcagtccaagtcatcactcaaaagtcatacccaggcatccactgtgtccagtccc
acgagtgagcagaagaaagcccagtacaagtcccccacttcagtgagcagtgccaactcc
agccttgatcgcaaacaccgtgagcccgatgtccttccgttgagaaggtctgactccagc
ggtcctgttcttcagttgtcttcccgctcacgccactcctcgtcttcctccacctctaag
ccctatgcggatgacagccttgatgcgctttacgcggacaccatcaaccgtcacgagaac
cgccgctacatccctttcgtgcctgggtcgggcagagacattgacaagggctccattccc
ggtgtcgatgagcttattgagaagtttgacggcaaagacggcagctaccatcggcgtgga
agggccgggcgaagaaaccggatcagtccagaagataggacacgctcacacagtgtggat
agcgccttcggctgggtggaaggatcaagaccccttgatgaaacgagtcgtcgtcggggc
acatcgatggagcacgtcctgcggccttcgcagctccggatggagagggcagctggtaat
caggacccctggttcatgatcagccccaaagcaacatctcgagtcacaagtgcccctgga
tctccccagagcaccatgtctaaaggtgtaggctacatccagggataccaaaaaagccac
caaagccattctgcagatgtcacactcaagaatcgagactcagtggacagtgcgtcatca
acaggcaagctgtcaacatctttatccaagtccgcaactggtggaaaaaaagtcagcgca
gacactgatgtacaggcaacaccagatctcctgaaaggtcagcaggagctttcacaacaa
acacacgaagagacagcaaagcaaattttgttcaattacctaaaggacggtagcaccgat
aatgatgaaacgaccaagagaaaggtcaacctggtctttgagaagattcaaacgctgaaa
tctcgagccacggcaggccctcctgatgaaaaagccttgggcctgtctgcacaaaccaaa
gccctgcaggagcaaaacactgcactggagaaaagaatggccgaactgaaacaacaactt
caagaacaaagaatgaaaaacaagacggacagcacggcggcttcaagattgaaggagctg
cagcgggaactagaccggactacagatgagtgcaaaagcttgaaggaaaaactggccaaa
actgaggctgaactccagagcacccttgaagagctgttccaggtgaagatggagagggag
caataccagacagagatccgagacctgcaggaccagttatcggagatgcacgacgagctg
gacacggccaagacgacaactgctggtgatgacgagagagaggccatcatggcggacata
atgcaactgaagatggagttgcaagaagttcttgtggccaaggaagagcaggaggatgtt
ctgaggaagcgtgaaagggagctgacggctctgaagggggccctgaaggcggaagtggcc
gctcacgatcaggagatggacaagatgaaggagaagtatgaaaaggagatcagtcggctg
cacaggtccttggaggagaccaagcagagcagcacggcggtcgtccaagagaaggctgaa
atggaggcagctaagggcacgctggagggccaagcggatcgtctgagccaagaggtggaa
cggctgcgcaagcgggcgcaagagctggaaaacgaagtggccaaactcaaccgcatcatc
gatgaggctaagctgcaggagagcaggctgggagaccgagtcgcacggatggagaaagag
aagaagcagctggaagagtctttaaatgaaatcaaggagcaagaagaggaaatgtctcgt
gctaaccgagctttgacgttacgacttgaagatgtacagcggaacttttccaagatgagc
ggtgagcacaagcagttggaggagcgtcttcaagaggagaagctacagaaggagcagttt
aagaatatgaagaatgacattgaggacgaaaggcggctgctggaccgaacggtggagaaa
cttcagaaagagatgaacgacatcgtggacgcatcccagtcctcaacacgggagctgcag
gaacagattgacatttacaaggaaaagaaccgacgggagctgactgagctgcagaagctc
cttaaggagcgaggccaggaactcgacaagtatctgctggctgcccaaacgctgcaagag
gagctgttgcgccgagaggatgatctacgtcgttgtgagcaggagcgagatgaggctgtg
ctcaatgagaagatgttggagaacaaagttaatgaactggaggcagcggtgaagaccaac
actcactcgaaagatgataagactcgacagttcaaactcatggaggacagaatcactcag
ctggagttggacttggacgaggagcgtcagaatggagaccagctgatggacaggctcgac
cgagggagagagcaggtggaccaaatgaggaatgaactcatgcaggagagggctggccgg
caggaggccgagtgtgacaagatggctctggagagacagagcaaagacctgaagaacaaa
ctggctgatctggagggctcgcaaaagtccagcaaagtgggccaggttgcgcagctggag
gatcgcattcatgagctggaggagcgtctggaggcggaggagagggagcgggccaacctg
caactgtccaatcgccggctggagaggaaggttaaagaagtgatgatgcaagtggaggaa
gaacaccacagcatgcaggatcaaaaggaccaattgaatctgcgcttgaaggccctgaag
aggcagatggacgaggctgaggaggagatcgacagactggagcacagcaagaagaagcta
cagagagacttggacgagcaacaagaaacaaacgagcagctgcagaatcagctcaagtct
ctacgcagtgagatgaggcgtaagagcacctcagcaccgctgctcaacaatctggacgac
gacgacgatgacgacgatgacatcagcacggacggggagacgtactttagctccacttcc
agctacaagcgctcgtccagtcaggacaacctcctgtctaccttcagcatgtag
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