Syngnathus scovelli (Gulf pipefish): 125966861
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Entry
125966861 CDS
T08785
Symbol
trim66
Name
(RefSeq) tripartite motif-containing protein 66 isoform X1
KO
K12032
tripartite motif-containing protein 66
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125966861 (trim66)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125966861 (trim66)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
PHD
zf-B_box
Motif
Other DBs
NCBI-GeneID:
125966861
NCBI-ProteinID:
XP_049573306
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All DBs
Position
4:complement(13349004..13364628)
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AA seq
1221 aa
AA seq
DB search
MEKSCSECSEMTLAQSLCTVCNKWLCYQCTDVHQHQRATASSQCTDLHDQQRPELHQRGS
GSGPGTGSYPCSLLMCQSHGQQPLELLCESCDLLCCSGCHLSSHKTHRVVQIGKALQDQR
WLFESLMVQVEERRSAVENNAKQIEDRVHGVKIAHRKAENQIKMAKMIMMNELNKRANLL
IEQLEKISEDLQQPLEDQLQGAIETCAQLNHLQKFISWATTHHCRGPVLFSRRLISLQMQ
QLRDSLLQSETWNPVKIKFNWDASYWTKQMSSLGQLTVEGGNCHYPQGLACSTVLRPQPI
TCLALPPVCHRGREPACGCQMCYEPQVCCLHGMPSQTDLDKSQVGGPLYKSSYVPTGPGC
QVQSQQLLRCWDSSDFCALQTSSQCPSPPSHAPLRGLIQSNCSRRPASQPQASTSEPQSL
PESHLRHHHQRGSLPVSNGLQSADQPQSNPSHVPSQETLSSSASLQEVLCDTIVEQDVVA
EESQDERCRVEKTHGQRVVAEHEWPLPNRSEKSSVQHQQVQVSSAADLRKEQQRITPALL
LPTTGRRSTSLDVSVTANNFGSNVEQSRLNPSSACTGGKIRSQSIPVELAAPGGSSYSER
PTRSTHSPDVGAPNMTTRKYVSTDSRQRRASDGVLCIVKETSADVILTRSRRAPLLSYKI
EPDPPYLNDEGRHDAKERHSVSRNGHNGSRDSERDSERARVPVVCLERLKVLISQLPPHG
RRQSDPLPAGTMEKDDLQQQTWHNTVSRGPDTIKTHAVTSSRSPENHQWLTVDSEWDTRP
RASFPKASTLPPDDPLDNTSALDFDSDSDPKSVSEEAVASQVEEQFDSDTSPEFSSETEL
EGLGQENEVLKSCNRNESMEASDPSLECDPFSESASGAGSEDGQGELGADADSGAAETES
DAQPEADAIVDAEKDSEHLSDQHVDSQDSVESELDIESEHETPDDPQPLRSDLEEDFTIG
PAQRPLLIANPGLPKRTEEVEADDEETESEDFCGVCLIGGDLLCCDRCPKVYHLSCHIPP
LLSFPSGDWLCSLCRDVVQPEVEYDCENRRTSGEHTSGHGLSACDQRKCERLTLLILNNI
LSAPFHEPVSPLARHYYQIIKRPIDLSIIRARLNKRSTQHYNSPEQFVADVYLMFHNCAK
FNYPDSEVAQAGRDLEAFFATKLQEVFPGRVFPVAEADSDSDEYDEAFRATEGGCSWPER
REQCHRKRKRRQSLKSRRHHM
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atggagaagagttgctcagagtgctcagagatgacacttgcacagagcttgtgcacagtg
tgcaacaagtggttgtgttaccagtgcacagatgtgcatcagcatcaaagagccacagca
tcatcccagtgcacagacctgcacgaccagcaaaggcccgaattgcaccagagaggctcc
ggctctggaccaggtacagggtcgtatccttgctccctccttatgtgccagtcccatgga
cagcagcccctagagctgctttgtgagtcttgtgacctcctttgctgcagcggctgtcac
ctgtcctcccacaaaacccacagggtggtgcagattgggaaggctctccaggatcagcga
tggctctttgaaagcctaatggtacaagtggaagagaggaggtctgcagtggagaacaat
gcaaagcagatagaggacagagttcatggagttaagattgcacacaggaaggctgagaac
cagattaagatggcaaaaatgattatgatgaacgagcttaacaaacgagctaacctatta
atagagcaactggagaaaatttcagaggacttacagcagcctctggaagaccagctgcag
ggggcaatagagacatgtgcccaactcaaccatttgcagaagttcatcagttgggcgacg
acccaccattgccggggcccagtgctcttcagcaggagactgatttctctgcaaatgcaa
caattgcgtgactcgttactgcagtctgaaacttggaatcctgtgaaaatcaaattcaat
tgggatgccagctactggaccaaacagatgtcctctttaggtcagctgactgtggaaggt
ggaaactgccactaccctcagggcttggcatgctccaccgttctaaggccccagcctatc
acatgcttggctctgccacccgtttgccacagaggacgagagcctgcctgtggctgccag
atgtgctatgagccccaagtgtgttgcctgcatggcatgccttctcagacagatctggac
aaaagccaggtcggaggtccactctacaagtccagctatgttccaactggccctgggtgc
caggtgcagagccagcagctgctgaggtgctgggactcaagtgacttctgtgccttgcaa
acatcttcccaatgcccttcgcctccatcacatgcccccctcagaggactaatccagagt
aattgcagtcgtaggcctgcatcccagccacaagcaagcacctccgagccccagtcactt
cccgaatctcatctccgtcaccatcaccagagagggtcgcttccagtcagcaatggtctg
cagagtgcagaccaacctcagtcaaacccgagccacgtcccatcacaggagacgttatca
agcagcgcaagtctgcaggaggtactctgtgatacgattgtggagcaagacgtcgtggct
gaggaaagtcaggatgagcgatgcagagtggagaagactcatggacaaagagttgtggca
gaacatgagtggccacttcccaacagaagcgagaagagttctgttcaacatcaacaggtt
caggtttcttcagcagcagatctgaggaaagaacagcagcgaatcactcctgccctgttg
ctaccaacgactggccggagatctacgtccctggacgtgtctgtgacagccaacaatttt
gggtctaatgtggagcagagcagactcaacccaagttcagcgtgcacaggcgggaagata
cgttcacagagtatccctgtagagctagcagcgccaggcggcagctcttattctgaaagg
ccaaccagatctactcacagtcctgatgtgggagctccaaatatgacaacaaggaagtac
gtcagtacagactcgaggcagagaagagcttcagatggtgttctttgcattgtcaaggaa
acctcagccgatgtaatcctgaccaggagtcggcgggctccattactctcctataaaatt
gagccagatcctccatacttaaatgacgagggccgtcatgatgccaaggaaaggcacagt
gtgtcaagaaacggtcacaacggcagcagagattccgagagagactcagaaagagccaga
gttccagtggtttgcctcgaacgcctgaaagttcttatctctcaacttcccccacatgga
cgaaggcagagcgaccccttacctgcgggcacgatggagaaggatgatttgcagcagcaa
acctggcacaatactgtgtcaagaggtcctgataccataaagacccacgcagtcacatca
tcacggtctccagaaaatcatcagtggctcacagttgacagtgagtgggacactcgccca
agggccagctttccaaaagcatccacattgccacctgatgaccctctggataatacctct
gcactcgactttgattctgactctgaccccaagtcagtgtcagaagaggctgtcgcctct
caagtcgaagaacaattcgactcggatacatcaccggagttctcctcagagacagaactg
gaaggtctaggccaagagaatgaagttctgaaaagctgcaacagaaacgagtctatggag
gcttctgatccaagtcttgaatgtgacccattttcagaatcagcttcaggagcaggatct
gaagacgggcaaggagaattaggtgctgatgcagactcaggtgccgcagaaaccgaatca
gatgcccaaccagaagctgacgccatagtggacgcagaaaaagattctgagcatttgtcc
gatcagcatgtggattctcaggactctgtggagtctgaacttgacatagaatctgagcat
gaaactccagatgacccacagcctctgcgttctgacctcgaggaagacttcaccattgga
cctgctcagaggccacttctaattgcaaatcctggcctgccaaagaggacagaagaagtt
gaggcggacgatgaggaaactgagagtgaggacttctgtggcgtgtgtctgatcggtggg
gaccttttatgctgtgatcgctgtcctaaggtttaccatttgtcgtgtcacatcccaccc
ctgctaagcttcccttcaggtgactggctttgcagcttgtgcagagatgttgtgcaacca
gaagttgagtatgactgtgaaaatagaagaacatctggggagcacacatcagggcatggc
ttgtctgcatgtgatcagagaaaatgtgaacgtttgaccctcctgatcctcaataacatc
ctgagtgctccctttcacgagcctgtcagtccacttgctcgtcattactatcagatcatc
aagaggccaattgacttgtccatcatccgagcacgactcaacaagaggagcacacaacat
tacaactcacctgagcagtttgtggcggatgtctatctcatgttccacaactgtgccaag
ttcaactatcccgattcggaggtggcgcaagcgggccgcgacctcgaggcctttttcgcg
accaagctgcaagaagtgttcccaggcagagttttcccagtggctgaggcggacagtgac
agcgatgagtatgatgaggccttccgagcaaccgagggtggttgctcctggccggagcgg
agggaacagtgccacaggaagaggaagaggaggcaatcgcttaagtcaaggagacatcac
atgtaa
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integrated database retrieval system
