Syngnathus scovelli (Gulf pipefish): 125966869
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Entry
125966869 CDS
T08785
Symbol
irx6a
Name
(RefSeq) Iroquois homeobox protein 6a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125966869 (irx6a)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
125966869 (irx6a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
125966869
NCBI-ProteinID:
XP_049573325
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Position
4:complement(19197880..19202499)
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AA seq
511 aa
AA seq
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MVTIEGAMSFSQFGYPYNASSQFFVSANPSTTCCDSISRSVPPEGSTGGAQTPAAVAAAA
TAAAASFCCPAPYENRLLAGSRSELNAAALGVYGSPYAAAAAASQNYANYFPYGTEPSAA
IYSSLNPQYDMKETAGTLHSGISQTAAYYPYDPSLGQYQYDRYGTMDFNSTARRKNATRE
TTSTLKTWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPKN
KAGDDRKDDISKIDHDCLTKDSNECKEEKDLHLSDLEDMDEDECDKLDGECEKGVPDEAV
ALSISPHKRDCTSELHLNVSNSFHHAFPCAIKPPLPPLPADFLDPVASKTPSTTGTLTLS
HFEASDKPRIWSLARTAAAGIILSPQHASELRTSNSSGDCQLQRLAGAPAVPGGQCGLMR
GLQEANSVSGAVTPFPEGPPLHSKIYGPGSFNHKGLQLHGPSYAALTDTCQYSTTEGFSG
AKAAEASSDLSQACVILQDDKVTAFRPVMKR
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggttacaatagaaggcgcgatgtctttctcccagtttggatatccttacaatgcaagt
tcacagtttttcgtgtcggcaaaccccagtacgacttgctgcgattcgatttccaggtcg
gtgccgcccgaaggctccaccggaggagctcagacgcccgcagccgtagcggcggccgcc
acagccgccgccgcctccttctgctgtcccgcgccttacgagaaccggctgctggctggg
agccgcagcgagctcaatgcggctgctctgggggtgtacggctccccctacgcggcggcg
gctgcagccagccagaactacgccaactacttcccctacggaaccgaaccctccgccgct
atctactcctctctgaatccacagtacgacatgaaggagaccgcaggcactttacactcg
ggaatcagtcaaacggccgcgtactatccctacgatccgtcgctgggccagtatcaatat
gacagatacgggacgatggattttaacagtacggccaggcggaagaacgccacccgagag
accaccagcaccttgaaaacgtggctctatgagcaccgcaagaacccgtaccccaccaag
ggggagaaaatcatgctggctatcatcaccaagatgaccctcacccaggtttccacttgg
tttgccaacgctcgacggaggctcaagaaggagaacaagatgacgtggtcgcccaaaaat
aaggccggcgatgacaggaaagacgacatcagcaagattgaccatgactgtctcaccaaa
gattccaatgagtgcaaggaagagaaagatttacatctaagcgatttggaggacatggac
gaggacgaatgtgacaagctggatggcgaatgcgaaaagggagtcccggacgaggctgtg
gcactttccatttcaccccacaaaagagactgcacctccgagcttcacttgaatgtgtcc
aacagcttccaccacgccttcccctgcgccatcaaaccaccgctccctcctcttcctgct
gacttcctcgatcccgtggcgtccaagaccccgtccaccacaggaaccttaactctatct
cactttgaagcgtcggacaagcctcggatttggtccttggctcgtacggcggcggcgggg
atcattctgagcccgcagcacgcctccgagctcaggacgagcaactcgagcggggactgc
cagctccaaaggttagcaggcgcccccgctgttcccggaggacaatgcgggctcatgaga
ggcctccaggaagcaaatagtgtctccggtgctgtgaccccttttcctgagggcccccct
ttgcactccaaaatctatggcccaggcagcttcaatcacaaaggcctccagctgcacggt
ccgtcctacgctgccctcacagacacatgccaatattccacaactgaaggattctccggc
gccaaagcagcggaggcgtcgtcagacctcagtcaagcgtgtgtgatcttgcaggacgac
aaggtcactgcattcaggcctgtgatgaagaggtga
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