Syngnathus scovelli (Gulf pipefish): 125966870
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Entry
125966870 CDS
T08785
Symbol
irx5a
Name
(RefSeq) Iroquois homeobox protein 5a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125966870 (irx5a)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
125966870 (irx5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
Motif
Other DBs
NCBI-GeneID:
125966870
NCBI-ProteinID:
XP_049573327
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All DBs
Position
4:complement(19283472..19286324)
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AA seq
471 aa
AA seq
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MAYPQGYLYQPSASLALYSCPAAYGTSVISGPRTEEIGRSSSGSAFAPYAGSTTASSAAA
AAAAAAAAFSGASPGYNSHHLPYGADAAAAAAATFTSYVSSPYDHSTGMAGSIGYHPYAA
PLGSYPYGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF
ANARRRLKKENKMTWTPRNRSEDEEEDENIDLEKNDDDDVTPNNNNNFKPTGDKTQESSD
TEADAKALHPGDVGCDRFKEDPLHPKDADPLLSDSESKEPEDPQERTTDLLLDSSSSSAC
GGKPTTSSPRAAGAPSSDLSHAPTSVIHSPPSAPKPKLWSLAEIATSSDRSKSSGDAQQL
QRSEQQPCSVVMGPASGSPSRSSPGVLSRPLYYASPFYPGYTNYHGATFGHLHGSGPSST
PSSTAHFNGLNQTVLSRAEALVRESHRVRGQTQVELCKDPPYELKKGMSNI
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccctcagggctacttgtaccagccgtccgcctccctggccctctactcgtgc
ccggcagcctacggcaccagcgtcatctcgggacccaggacggaggagatcggccgctcg
tcgtcaggctctgccttcgcaccctacgccggatccaccactgcctcctccgcggcggcc
gccgccgctgcagccgcagccgccttcagcggcgcttcgcccggctacaactcgcaccac
ttgccgtacggcgcagacgcggcggcggctgcggcggctacttttacctcgtacgtgagt
tccccctacgaccattcgacgggtatggccggctcaatcgggtaccacccgtacgcagcg
cccctgggctcttacccgtacggcgacccggcctaccgcaaaaacgccacgcgtgacgcc
accgccacgctcaaggcctggctcaacgagcaccgcaagaacccgtacccgaccaagggt
gaaaagatcatgctggccatcatcaccaagatgacactgacccaggtctccacctggttc
gccaacgcccggaggaggctcaagaaggagaacaagatgacgtggacgccgcgcaatcgc
agcgaggacgaggaggaggacgagaacatcgacctggagaagaacgacgacgacgacgtg
accccaaataataataacaacttcaaacccaccggagacaagactcaagaatcctcggat
actgaagcagatgccaaagcactgcacccaggggacgtaggctgcgatcgcttcaaggag
gaccccctgcaccccaaggacgcggaccccctcttgagcgactccgagtctaaagaaccg
gaggacccgcaggagcggactactgacttgttgttggattcttcttcctcttccgcctgc
ggcggcaagcctaccacttcgtccccacgcgcggcgggggctccttcgtcggacctaagc
cacgcgcccacctccgtcatccactcgcccccttcggcccccaaacccaaactgtggtcc
cttgctgaaatcgccacctcgtcggatcgcagcaaaagcagcggagacgcgcagcaactg
cagcggagcgagcagcagccttgctcggtcgtcatggggcccgcgtcaggctccccttcc
cgatcctcccccggcgttctttcgcggcccctttattacgcgtcgcccttctacccgggc
tacacgaactaccacggggccactttcggacacctccacggctccggccccagcagcact
ccctcctccacggcgcacttcaatggattaaaccagactgtattaagtagggctgaggct
ttggtgagggagagccacagagtgagaggccaaacgcaggtagagctttgtaaagaccct
ccttacgaactgaagaaaggtatgtcaaacatttaa
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