Syngnathus scovelli (Gulf pipefish): 125966877
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Entry
125966877 CDS
T08785
Symbol
shank2b
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 2b isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
SAM_2
Ank_5
Ank_3
SH3_2
PDZ
PDZ_6
SH3_9
SH3_1
FERM_f0
RecJ_C
Motif
Other DBs
NCBI-GeneID:
125966877
NCBI-ProteinID:
XP_049573340
LinkDB
All DBs
Position
4:complement(2926988..3189139)
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AA seq
1887 aa
AA seq
DB search
MVSVHRKKLDIAAPGLMTIPRSPTSSEDEMAQSFSDYSDDCASESSHEETIYETIRATAE
PSPHHMDNIHINSQVIRIIIPDLQQMKCMRFNPNATVWVAKQRILCTLNQSLKDVLNYGV
FQPANCGRDGMFLDEEHYLREYPQPISKGVPCLEFRYKRRVHRQPNLDEKQIAKLHTKDN
LKKFMDLILNNQVDKVSKMLERGLDPNYNDSDTGESPLTMTAHLDNVVEMIKVLKNGGAH
LDFRAKDGMTALHKAARSKNQVTLTTLLELGASPDYKDSCGLTPLYHSAVVGGDPGCGEL
LLNHHASVCCQDENGWHEIHQACRHGHVQHLEHLLFYGADMSAQNASGNTALHICALYNQ
DNCAKVLLVRGADKEVRNYNSQSPFQVAIIAGNFELAEIIKNHKETDLVPFREVPAYSKR
RQGPSSGNSSGNSKSPASLSAPRVLLRSNSDNNLTVSQYQQQGSPRHRGQQHPQQHPNKV
PQQGHSQPGSSALHRSLSPQLLQQMPSGSPNGNVVVRTMGRGSRSRSPSLSQLGDDVRRA
IPSQCQPSPSSHEEAQGTRRKLYSAVPGRHFLVVRPYTAQAEGEIYLYKNDRVKVLSIGE
GGYWEGSARGQVGWFPADCVEEILAKATEERSYSRVDRADRRKLFRHYTVGSYDSFDASS
DCVVDEKTVVLQKKENEGFGFVLRGAKADTPIEEFTPTPAFPALQYLESVDEGGVAWQAG
LRTGDFLIEVNQENVVKVGHRQVVNMIRQGGNRLLIKVVTVSRNLDPEDTARKKAPPPPK
RAPTTALSMRSKSMTSELEELATLRKKKGGKVEEMTHAQKTSPIDMKIATIKPRPSSRCL
ITPTELNSMYHDRQGVAVVPPTVPGAFLGLPEKGVLRKQKSIGTTEEEKQGFLTPPLLKF
SRSLSMPDTSEDIPPPPGISPPSPPAYNSPAVSTPKSYGTTRPSFTQNSPNAVTSISRTS
DIGTLRRGYHRQSSEHFESPRTRGRTPVPENPYSEVGNKNLYVPAKPARRKGMLVKQSNV
EDSPEKTCHMPASPSGPVSMPTTPVERTCSSIPIPTIIVKEPSTSSSGKSSQGSSMEIEP
TTPEHPSLMPTGGVSGGLRPEDPMSLGNPFAAAIAGAVRDREKRLEARKNSISFQSVDMG
DDDLIGPTPTPRLRQSKSIDEGMFGSDERLRRMMVPAVHLGPPVGGGSGNMTDFNTPEPT
VVREPLNTKTGQCPNLDSPVSLPATPPKSHYRANGTYLHPVTGKPLEPNSPLALALAARD
RAMKEQQNHQQNLPQVPQTPKHEAHSLPLQPSHKPDLNQPLFIDTKLRSGIETSFAAISS
ATMGRPGRGGLRRQMTEQKYDSDAAREEQQHQAVEERKSAPADVADTPKSAGLLMVHTST
EASNKLNSQELEGQDSNRPSELKDPNQPDPRSGPSLSINPQSSSTQRRTIPLGESLDEPV
KLPFRIPPPPLASVDIDEDFDFVEPLPPPLEFANSIDIPDDQASAIAQMLQQQRRNGGPL
LPPYNVHAPTLVTDQHKRMTNSTPPSYPLPPPDPEAGIGDSGIEEVDSRSSGDPQHMETT
STVSSISTLSSEGGFCDTTLESLYATADGHSFLVDRPPVPPKPKGKSVINRTSLYHDALI
EEPPESYGSPPQALPARTSSSEPPRTPTQRTSKLWGDQPPELHSPPSTPDTKNTVITELS
SILQHMNRDRPPKSGESLDSPTGNQEAFGTRPPSDDSGMRNNAAVAAAAAALTSTPPSSL
PSQTHPCSPSDSASSLTPCSSLPPSVSPTLTDVFSLPTPPMGSGGGYSLSSSCGGSSRSP
SPLTLMQAVAASGKPFVSKPVELWSKYDVADWLESLHLGEHRNAFLDNEIEGAHLPSLQK
EDLIDLGVTRVGHRMNIERALKLLQDS
NT seq
5664 nt
NT seq
+upstream
nt +downstream
nt
atggtttcagtacacaggaagaagctagacatagctgcgccaggcctgatgacaatcccc
cggagccccacttctagtgaggatgagatggcccagagcttttctgattattctgatgac
tgcgcctctgaaagctcccatgaagaaactatttatgaaactattagggccaccgctgag
ccttcaccacaccacatggacaacattcacataaactcacaggtgatccgcattatcatc
cctgacctgcagcagatgaaatgtatgcgtttcaaccccaacgccacagtctgggttgcc
aagcagcggatcctgtgcacactcaatcagagcctgaaggatgtgctcaactatggcgtt
ttccagcctgccaattgtggaagagatggcatgtttctggatgaagaacattacctcaga
gagtaccctcagccaatcagtaaaggtgttccgtgtttggagtttcgctacaagagacga
gttcacaggcagcccaatttggatgagaaacaaattgccaaacttcatacaaaggacaat
ctgaagaagttcatggaccttatactcaacaatcaggtggacaaagtgtcaaagatgtta
gagagaggcctcgatcccaactacaatgacagtgacactggtgagagccccttgaccatg
acagcacatctggacaatgtggtggagatgatcaaggttcttaagaatggaggcgctcac
ttggacttcagagccaaagatggcatgacagctctccataaagcagcacgttccaagaac
caggttacgctcacgacactgttggagctgggggcatctccagactacaaggacagttgt
ggtctgactcctctgtaccacagcgcagttgtggggggagacccaggttgtggtgagctt
cttttgaaccatcacgcctctgtgtgctgccaggatgaaaatggctggcatgaaattcac
caggcttgccggcatggacatgtgcaacatctggagcatcttctgttctatggagcagac
atgagtgctcagaatgcctcaggaaacactgccctacacatctgtgctctatataaccag
gataattgtgccaaggtgctgcttgttcgtggagctgataaagaagttaggaactacaac
agccagagtccctttcaggttgcgattattgctgggaactttgagctcgcggaaattatc
aagaaccacaaagagactgatctggtgccttttcgtgaggttcctgcatactccaaacga
cgccaaggtccatcatctggcaacagcagtggaaacagcaaatcccccgcatcgttatca
gctccgagggtcctgctgcgctccaacagtgacaacaatttgacggtcagtcagtaccag
cagcaaggttcacccaggcaccggggacaacaacatcctcagcagcacccaaacaaggtc
ccccagcagggtcactcgcagcctggctcctcagctttacatcgcagcctgtcacctcag
ctgcttcagcagatgcccagcggcagccccaatggcaatgtggtggttcggaccatggga
agggggtcgaggagccggtcaccctccctcagccagctgggagatgatgtccgacgggct
ataccctcacagtgccaacccagtcccagcagtcatgaagaagcccaaggcacaaggagg
aagctgtacagtgcggtcccggggagacactttttggtggttcgtccttacactgcccag
gccgaaggagagatctacctctataagaatgatagagtcaaagttctcagcatcggagaa
ggtggctactgggaaggcagcgcccgcggccaggtgggctggttcccggccgattgtgta
gaggagatactggccaaggccactgaggagaggagctattcccgagtggaccgtgctgac
agacggaaactgtttagacactacactgtgggatcttacgacagctttgatgcctccagt
gactgcgtggtggacgagaagacagtggtactccagaagaaggaaaatgaaggattcggc
ttcgtcctacgaggagccaaagcggacacacccattgaggagtttacacccactccagcc
ttccctgctctgcagtatctggagtcagtggatgaggggggcgtggcatggcaggcaggg
cttcggacgggggacttcctcatcgaggtgaatcaggagaatgtggtgaaggtgggccac
agacaggtggtcaacatgatccgccagggtgggaaccggcttttgatcaaggtggtgaca
gtgagccggaatctggaccccgaggacacagcacgtaaaaaagctcctcctccaccaaag
agagctcccactactgccctgtccatgcgctccaagtcaatgacgtctgaattagaggaa
cttgccactctaaggaaaaagaaaggtggtaaagttgaagagatgacgcatgcccagaag
acatcaccaattgatatgaagatcgcaacaatcaagccacggccatccagtcgttgcttg
attacacccactgaactaaattctatgtaccatgaccgccagggagtagcagtggtccca
cccactgtgccaggggcctttctggggttaccagagaagggcgtgcttaggaagcaaaag
tctataggtacaacagaggaggaaaaacagggtttccttacaccacctcttcttaagttc
tcccgtagcctctccatgccagatacttcagaggatatccctcctcctccaggcatttct
cccccctcaccacctgcctacaactcccctgctgtctcaacaccgaagagttacggtacc
acaagacccagcttcacccagaactcacctaacgcagtgacaagtattagtagaacctca
gatattggtacattgaggagaggttatcacagacagagttcagagcattttgagagcccg
cgcactcgagggcgtacaccagtgcccgaaaacccttactctgaggtaggcaataaaaat
ttgtatgtgccagcaaaaccagcccgaagaaagggcatgctagtaaaacagtcaaatgtt
gaggacagtccagaaaaaacatgtcatatgccagcaagcccatcgggcccagtttccatg
cctactacacctgttgagcgaacatgctcttccatccccattccgaccatcattgtcaag
gaaccatccaccagcagcagtggcaagagcagccagggtagcagtatggaaattgagccc
accactccagagcacccatctctaatgccaactggtggtgtaagtggtggtttgcgtcct
gaagacccaatgtctctaggcaacccatttgcggcagctatcgctggggcggtacgagac
cgtgagaaaagacttgaggcaagaaagaactctatttccttccagtcagtagatatgggg
gatgatgatttaattggccctacaccaacacctcggcttcggcagtcaaagtccattgat
gaaggcatgtttggtagtgacgagcgacttaggaggatgatggttccagcagtgcacctt
ggacctcctgtcgggggaggcagtggaaatatgaccgatttcaacactccagagcccaca
gttgttcgggagcctctaaacactaaaacaggacaatgtcctaacttggacagccccgtt
agtctcccagccacaccaccaaagagccactacagggccaatggaacctaccttcatcct
gtcactggtaaacctcttgaacctaattctcctcttgctttggccctcgcagctcgtgac
cgagcaatgaaggagcaacaaaatcatcagcaaaatcttcctcaggttccgcaaactccc
aaacatgaagcccattccctccccctgcagccaagccacaaaccagatcttaatcagcca
ctctttattgataccaagttgcggtctgggatcgaaacgagttttgctgctatctcctct
gcaaccatgggtcgtccaggtcgaggcggcttgcggaggcaaatgactgagcagaaatac
gactctgacgcagcccgggaagagcaacaacatcaggcagttgaagagaggaaaagtgca
ccagcagatgtggctgacactcctaaatcagctgggctcttaatggttcacaccagcaca
gaggcaagcaacaagttaaatagtcaagagttggaagggcaggatagcaacaggccatct
gagcttaaagaccccaatcaacctgatcctcgcagtggaccatcattgtctattaatcct
cagtcctcctcaacacaaagacgcaccattcctctaggggaatccttagatgaacctgtg
aagctacccttcaggataccccctcctcctctggcgtcagttgacattgatgaggatttt
gactttgtagagccactcccacctcccttagagtttgcaaacagcattgacatccctgat
gaccaggcgagtgccattgcacaaatgcttcaacaacagagaaggaatggggggcctctg
ctccccccatataatgtccatgcccctacacttgttactgatcaacacaaacgaatgaca
aacagtactcccccttcgtatcctcttcccccaccagacccagaagcagggatcggggac
tctggaattgaagaggtagacagccgcagcagtggcgatcctcagcacatggagaccacc
agcaccgtgtcaagcatctccaccctttcgtcagagggaggcttctgtgacaccaccctg
gagagcctttatgctactgcagatgggcattccttcctggtggatagacccccggtacct
ccgaaacccaaaggaaaatcggtcatcaacagaacttcactttaccatgacgccctaatt
gaagaaccaccagaatcttatgggtccccacctcaggctcttcctgctcgaacttcatct
tctgaacctcctaggacgcccactcaaaggacatcaaagctgtggggtgatcaaccccct
gagcttcatagccccccatctacaccagacaccaagaacacagttatcacagagttgagc
tccattctgcaacacatgaatcgtgatagaccacccaagtcaggagaaagcctcgactcc
cccacaggaaaccaagaggcctttggaacaaggcccccttcagacgactcaggaatgcgt
aacaacgctgctgttgctgctgccgctgccgccctcacctccacgcctccgagcagcctc
ccttctcagacacacccctgcagtccttcagactctgcctcctccctcaccccctgctct
tcacttccaccttcagtgtcgccaaccctcacagatgtcttcagtctgcccaccccgccc
atgggtagcggcggaggctacagtctgagctcgtcgtgcggcgggagctcgcgttcgccg
tcgccgctgacgctcatgcaggcggtggcagcgtcaggcaaaccctttgtctccaagcct
gtggagctttggagcaagtacgacgtggccgactggctggagagcctccacctgggagag
cacagaaacgctttcctggataatgaaatcgaaggtgcccatctgccctccttgcaaaaa
gaggacctgatagacttgggcgtcacaagggtgggtcaccgcatgaacatcgagagggcc
ctcaagctgctgcaggacagctaa
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