Syngnathus scovelli (Gulf pipefish): 125966887
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Entry
125966887 CDS
T08785
Symbol
arnt2
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator 2 isoform X1
KO
K15589
aryl hydrocarbon receptor nuclear translocator 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125966887 (arnt2)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
125966887 (arnt2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
PAS_4
Per3-like_PAS-A
PAS_2
bHLH_NCOA
bHLH_INO2
Motif
Other DBs
NCBI-GeneID:
125966887
NCBI-ProteinID:
XP_049573393
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Position
4:complement(2613182..2748501)
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AA seq
731 aa
AA seq
DB search
MATPAAVNSSEMGSELPGTVVMPGAVGSGPVRMGGSVPGRGGKRRSGGMDFDDEDGEGPS
KFSRYDDDQIPGEDKEKYARENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTI
LRMAVSHMKSMRGTGNTSTDGAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSD
SVTPVLNHPQSEWFGSTLYEQVHPDDVDKLREQLSTSENSMTGRILDLKTGTVKKEGQQS
SMRMCMGSRRSFICRMRCGSAPLDHISLNRLSNMRKRYRNGLGPSKEGEAQYSVVHCTGY
IKAWPPAGMTVPDEDTEAGQTGKYCLVAIGRLQVTSSPVSMDMNGLSVPTEFLSRHNSDG
VITFVDPRCINVIGYQPQDLLGKDILEFCHPEDQSHLRESFQQVMKLKGQVLSVMYRFRM
KNREWMLIRTSSFTFQNPYSDEIEYIICTNTNVKQLQQQQAELEVHQRDGLTAYDLSQVP
VASVSSGVHEAGKSIDKPEALFSQERDSRFVEMYSSISGSGDKKMMVPSSTAGGQQLYSQ
SSPFQQGHAGKSFSSSVIHVPGVNDIQPSSSSNQNLAQISRQINPGQVAWSGNRPPFSGQ
SSKAQSSPFGIGTGHSYQTDPASYSPLSSPATSSPSGNAYSGLTNRSTGFDVSGESNQSG
GQFQGRPSEVWSQWQNQHHSQQAGEQHTHPNASQTEVFQDMLPMAGDPTQGTANYNIEDF
ADLGMFPPFSE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcccgccgcggtcaattcgtccgagatgggcagtgagttgccgggtacagta
gtgatgccgggggcagtgggatccggcccggtaaggatgggaggatcggtgccaggccgt
ggtggcaagagaagatcaggcggaatggactttgatgacgaggacggagagggacctagc
aaattttcaaggtatgatgatgatcagatacctggtgaggataaggaaaaatatgccaga
gagaaccacagtgaaattgagaggcgcagacgcaataaaatgacacagtacatcaccgag
ctgtcagacatggtccctacctgcagtgctctggcccgtaaacctgacaaactgaccatt
ttgcgaatggcagtctctcatatgaaatcaatgcgaggcactgggaacacatccactgat
ggagcctataagccctcatttcttactgaacaggaactgaagcatctgattttggaagca
gcggatggctttctgtttgtggtggcggcagagacgggacgcgtgatctatgtctctgat
tctgtgacaccagtgttgaaccacccccagtctgagtggtttggcagcactctttatgaa
caggtccacccagatgatgttgacaagctgagagaacagctcagtacctccgaaaactcc
atgacaggacggattcttgacctgaagacaggaacagttaaaaaggaagggcaacagtct
tccatgagaatgtgtatgggctccaggcgctccttcatctgccgtatgaggtgtggcagt
gctcccctggatcacatttcactaaatcggctgtctaatatgaggaagagatacaggaat
ggcctcggaccttcaaaagaaggagaagctcagtactctgtggttcattgcactggctat
atcaaagcttggccccctgcaggtatgactgtaccagatgaggacacagaggcaggccag
accgggaaatattgcctcgtggccattggaagactacaggtaaccagctcacctgtctct
atggatatgaatggtctgtcagtacccacagagtttttgtcccgccacaattcagatggg
gtcatcacctttgttgacccgcgctgcatcaatgttattggttatcagcctcaggacctg
ttggggaaagacattctagagttttgtcatcctgaggaccagagtcacttgagagaaagt
tttcaacaggtaatgaagctaaagggtcaggtactatctgtgatgtaccgtttccgcatg
aaaaacagagagtggatgttgatccgaaccagcagcttcaccttccagaacccctactct
gatgagattgaatacatcatctgtaccaataccaatgttaagcaacttcagcagcaacag
gcagagttggaagttcaccagagggacggtcttaccgcttacgatctttcccaggttcct
gtagccagtgtgagcagtggagtgcatgaggcaggaaaaagcattgacaagccagaagct
cttttttcccaggagagagattcccgctttgttgagatgtacagcagcatctctggatcg
ggtgataagaagatgatggttccctcctctacagcgggaggacagcagctttactctcag
agttctccgttccagcagggccacgctggaaaaagtttcagttcctctgtgatccatgtc
ccaggtgttaatgacatccagccatcaagttcatccaatcagaatcttgctcagatatca
agacagatcaacccaggccaagttgcttggtcaggaaaccgaccccccttctctggccag
tccagtaaagcccagtccagtccttttggtattggtacgggccacagctaccagactgat
ccggcctcctacagtcctctttcatccccagccacatcatcccccagcggcaatgcctac
tcgggactgacaaaccgcagcacaggttttgacgtgtcaggagagagcaaccagagcgga
ggtcagtttcagggtagacccagtgaagtctggtcccagtggcagaaccagcatcactcc
cagcaggctggggagcagcatacacatcccaacgcgagccagactgaagtgtttcaggac
atgttacccatggctggagatcctactcagggaacagccaactacaacattgaggacttt
gctgacctcggcatgttcccacccttctccgagtaa
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