Syngnathus scovelli (Gulf pipefish): 125966894
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Entry
125966894 CDS
T08785
Symbol
lrrc8db
Name
(RefSeq) leucine rich repeat containing 8 VRAC subunit Db
KO
K22038
volume-regulated anion channel
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125966894 (lrrc8db)
Ion channels [BR:
sscv04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
125966894 (lrrc8db)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_1
LRR_5
LRR_9
LRR_EndoS
LRR_LRWD1
DUF4897
Motif
Other DBs
NCBI-GeneID:
125966894
NCBI-ProteinID:
XP_049573417
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Position
10:complement(9695666..9701248)
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AA seq
835 aa
AA seq
DB search
MFTLTEVASLNDIQPTYRILKPWWDVFMDYLGIIMLMLAIFAGTMQLTRDQVVCLPDLDS
DPDKVAPLPTEAPDRLQGKESAAVEQGAPLTPAPDQAPTQQPPPAGIRTKLDFQQYVFVN
QMCYHVALPWYSKYFPYLALIHTLILMVSSNFWFKYPRTSSKIEHFVSILGKCFESPWTT
KALSETACEDSEENKQRLAGATAQHKHFSTSSEEGSPNQSAPMLSKSGVTFSTEKLVSEA
PSMTILDKKDGEQAKALFEKVRKFRAHVEDSDMIYRLYALQTLIKTVKFIVILCYTMNFV
TSIDFYHLCEPEVKHLTGYGKFHCTHNMAFMLKKLLVSYIALICVYGVICIYTLFWLFRR
PLKEYSFEKVREESSFSDIPDVKNDFAFLLHMVDQYDQLYSKRFGVFLSEVSENKLREIS
LNHEWTFEKLRQHVTRNAQEKLELHLFMLSGVPDAVFDLTDLEILKLELIPEAKITAKIS
QMINIQELHFYHCPAKVEQTAFIFLRDHLRCLHVKFTDVAEIPSWLYLLKNLQELYLVGN
LNSENNKMIGLESLRDLRHLKVLHLKSNLTKIPTNITDLSPHLVKLVVHNDGTKLLVLNS
LKKMTNLSELELHNCELERIPHAIFSLNNLQELDLKSNLIRTIEEIISFQHLKRLTCLKL
WHNKIISIPLSITHVKNLESLYLSHNKLECLPSALFNLLKLRHLDVSHNSIAVVPPEVGF
LQNLQHFAITGNKLEVVPKQLFKCTKLRTLCLGHNCITALPERVGQLGQLSHLELKSNCL
DRLPPQLGQCPLLRRGCLLVEDHLFDSLPVEVKESLNQETAGAFANGCRCLTDGR
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgttcaccctcaccgaagtcgcctccctgaacgacatccagccgacttaccgcatcctg
aaaccatggtgggacgtctttatggattacctgggcatcatcatgctcatgctggccatc
ttcgccgggaccatgcagctgacgcgcgaccaggtggtctgtctgcctgacttggactcg
gaccccgacaaggtggcgcccctgccgaccgaggcgcccgacaggttgcagggtaaggag
agcgccgcggtggagcaaggggcgcccctgacgccagcccctgatcaagcaccgacgcag
cagccgccccccgccgggatccgaaccaagctggacttccagcagtacgtctttgtcaat
cagatgtgctaccacgtggcccttccgtggtactccaaatactttccttacctggcgcta
atccacacactcatcctgatggtgagcagcaacttctggttcaagtatcctcgcaccagc
tccaagatcgagcactttgtgtccatcctgggcaagtgtttcgagtctccctggactacc
aaggcgctctcagagacggcgtgcgaggactcagaggagaacaagcagcgtctggcgggg
gccactgcccagcacaagcacttctccaccagcagcgaggagggcagccccaaccagtcg
gcacccatgctgagcaagtccggcgtcaccttctccaccgagaagctggtgagcgaggcg
ccctccatgaccatcctcgacaagaaagacggcgagcaagccaaggcactcttcgagaag
gtccgcaagttccgcgcccacgtggaggacagtgacatgatctaccgcctgtacgccctg
cagacgctcatcaagaccgtcaagttcatcgtcatcctgtgctacaccatgaactttgtg
acctccatcgacttctaccacttgtgtgagccggaagtcaaacacttgaccggatacggg
aagttccactgcacgcacaacatggcattcatgctgaagaagctgcttgtgagctacatt
gcgctcatttgcgtctacggcgtcatctgcatctacacgctcttctggctcttccgccgc
cccctcaaggagtactccttcgagaaggtccgcgaggagagcagcttcagcgacatcccc
gacgtgaagaacgactttgccttcctgctgcacatggtggaccagtacgaccagctctac
tccaagcgcttcggcgtcttcctgtcagaggtcagtgagaacaaactgagggagatcagc
ctgaaccacgagtggacctttgagaagctccggcagcatgtgacccgcaacgctcaggag
aaattggaattgcacctcttcatgctgtcaggcgtgcccgacgccgtgtttgatctcacc
gacttggagatcctcaagctggagctcatacccgaggccaagatcacggccaagatctcg
cagatgatcaacatacaggagctccatttttaccactgtccggccaaagtggagcagacg
gcattcatcttcctgcgggaccacctgcgatgccttcacgttaagttcacggacgtggct
gagatccccagctggctgtacctgctgaagaacttgcaggaactctacctggtgggcaac
ctgaactcggagaacaacaaaatgattggactcgagtctctgcgagacctgcggcacctg
aaggtcttgcatctcaagagcaacctcaccaagatccccaccaacatcacggatctgtcg
ccgcacctggtcaagttagtggtgcacaacgacggcaccaagctcctggtgctcaacagc
ctgaagaagatgaccaacctgtccgagttggagctgcacaactgtgagctagagcgaatc
ccgcacgccatcttcagcctcaacaaccttcaagaactggacctcaagtccaacctcatc
cggaccatcgaggaaatcatcagcttccagcatctgaagcggctgacgtgcctcaagctc
tggcacaacaagatcatctccatcccgctgtccatcacccatgtcaaaaacctcgagtcg
ctctacctgtcgcacaacaagctggagtgtctgcccagcgccctcttcaacctgctcaag
ctacggcacctagacgtgagccacaactccatcgctgtcgtcccccccgaggtgggcttc
ctgcagaacctccagcactttgcaatcaccggcaacaagttggaggtagtccccaagcag
ctcttcaagtgcaccaaactgcggacgctgtgcctcggccacaattgcatcaccgccctg
ccggagcgggttgggcagctggggcagctgagccaccttgagctgaagagcaactgcctg
gaccgtcttccgccgcagctgggtcaatgcccgttgctgcgccgaggctgcctgctggtg
gaggaccacctctttgactcgctgcccgtggaggtcaaggagagtctcaaccaggaaact
gccggcgctttcgcaaacgggtgcaggtgtctgacggacgggcgatag
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