KEGG   Syngnathus scovelli (Gulf pipefish): 125966912
Entry
125966912         CDS       T08785                                 
Symbol
ushbp1
Name
(RefSeq) colorectal mutant cancer protein
  KO
K21881  Usher syndrome type-1C protein-binding protein 1
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:sscv03037]
    125966912 (ushbp1)
Cilium and associated proteins [BR:sscv03037]
 Primary cilia and associated proteins
  USH complex and associated proteins
   125966912 (ushbp1)
SSDB
Motif
Pfam: USHBP1_PDZ-bd CENP-F_leu_zip DUF2690
Other DBs
NCBI-GeneID: 125966912
NCBI-ProteinID: XP_049573458
LinkDB
Position
10:complement(1392893..1397301)
AA seq 666 aa
MEQFRLVRCNSLDTASGSGKEPRMPLDHRGLYPELEPSPAELAQCEAEVGTLLSIIAEVN
KKMGSLKAPGEPDDLRPPRPSSPLFPDLLSHRLVRSIPENITTSDVKCRPSLPYRGGSSV
MWAELKGALTAVEDSINYRRSWAAPITSSELEKPKEHLRAAQDSWAKATKILEEMEKEFG
IACPSDVGRETFQEVVMEKQAPMVELQRAHSINQVEEEEKSKVGQQRAWRSAICSPPYKS
SGSADRMSSSFPGSPLLLRRAAGGSLSSGGDSSPRSFVTSGSPCSSPNGLETEIEHLNRY
IEKLKTKNERLTVALERRRSECEQIGITLKRLEAECSTAHLALRYCEECEEAYGQLLSLY
DAQRQQCLTNGAGVNNDQQTSSSPSLQKRKMSSDSEELSTAFTDVTKEMERHKMQRTPEA
IDREVALRQLIERLKRERAAICLPKPRPHREKISPESAMRVGHLSKDNKPVESKRDKTSL
FHEMITAREEMSDLRALIRLKEKELRCLEWSVVAQKAQEASGARIPQGLREKPEDCKTEQ
QRLCENADKVCSDADVSGLRSRPILKELQVLLQREQALKKRLAFVHDSLNASLPESASNS
DEHVARIAQAHSKALSSYRHIRRRYREQVWKLEQKLAAMMESQHTHNQTSKAAGEDSEWR
REETVL
NT seq 2001 nt   +upstreamnt  +downstreamnt
atggagcagtttcgcttggtccggtgtaacagcttggatacggcgtctggcagcggcaag
gagccgaggatgcctttggaccacaggggcctttaccctgagctggagccttcaccggca
gaactggctcaatgtgaagctgaagtgggcacgctgctcagcatcatcgctgaagtcaac
aaaaagatgggctcgctcaaggcacccggtgaaccagatgatctgagaccaccaagacca
tccagtcctctttttcctgacctgctttcacacagactagtgagaagcattcccgagaat
atcaccacgtctgatgtcaaatgtagaccttcactgccttatcgagggggcagtagtgtg
atgtgggcagaactgaaaggtgctctgactgctgtggaggactcaatcaactacagacgg
tcctgggcggcccccatcacatcctccgagctagaaaaacccaaagagcatctaagagca
gctcaggatagctgggccaaggccacaaagattttggaagagatggaaaaggaatttggg
attgcttgcccatcggatgtgggtagggaaacattccaggaggtagtcatggaaaagcag
gctccaatggtggaactgcagagagcacacagcatcaaccaggtggaggaggaggagaag
agcaaggttggtcagcagagggcctggaggtcagccatttgctctcctccctacaaatct
tcaggcagcgcagaccggatgtcctcctcctttccaggttctcctttactcctcaggaga
gctgcaggaggctcgttatcttcaggaggtgacagctccccgcggagctttgtcacctca
ggtagtccttgttcaagccccaacggcctggagactgagatagaacacttgaataggtac
attgagaagctgaagaccaagaatgagcgtctgactgttgctttggagcgaaggaggtca
gagtgtgagcagatcggtattacattaaagaggctggaggccgagtgctcgaccgcgcac
ttggctctccgatactgcgaggagtgcgaagaggcttacggccaacttttgtcgctttac
gacgctcagaggcagcaatgcttgaccaacggagcaggggtcaataacgaccagcagact
agcagcagtccgtcgcttcagaagaggaaaatgtcaagtgacagtgaggagctgtccacc
gccttcactgatgtcaccaaggagatggaaagacacaaaatgcagagaacgcccgaagcg
atcgatcgagaagttgcgctccgtcagctgattgagcggctaaaaagagagcgggcggcc
atttgcctcccgaagccacggccgcatcgagaaaaaatcagcccagagtctgccatgaga
gtgggacatttatccaaagataacaagccagtggaaagcaagcgagataaaacatctctg
ttccatgagatgatcacagccagggaggagatgtcggatctccgtgctctgatccgtctg
aaggagaaagagctgaggtgtctggagtggagcgtggtggcccaaaaagcacaagaagca
tctggagcacgtattccccaaggcctcagagaaaagccggaggactgtaagactgaacaa
cagagactctgcgagaatgcagataaagtgtgtagtgatgctgatgtgtctgggctcagg
tccaggcccatattgaaggaactgcaggtgctacttcagagggaacaagccctgaagaag
agattggcctttgttcatgactcattgaatgcatcgcttcccgaaagcgcctccaacagc
gatgagcacgtggcacggattgcacaagctcacagtaaggccttgagctcgtacagacac
attcgcagaagatacagggagcaagtttggaagctggagcagaaactagcagccatgatg
gaaagtcagcacacgcacaaccaaacgtccaaggcagcgggagaagattcagaatggagg
agggaagaaactgttctgtga

DBGET integrated database retrieval system