Syngnathus scovelli (Gulf pipefish): 125966949
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Entry
125966949 CDS
T08785
Symbol
irx3a
Name
(RefSeq) iroquois-class homeodomain protein IRX-3a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125966949 (irx3a)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
125966949 (irx3a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Dicty_REP
Motif
Other DBs
NCBI-GeneID:
125966949
NCBI-ProteinID:
XP_049573501
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Position
4:19461847..19464893
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AA seq
427 aa
AA seq
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MSFPQLGYQYIRPVYPPERQGMAGNARSAAAAAAAAAAAELSPSGALSNVLSMYGAPFAA
AAAQGYGAFLPYSNDISIFNQLGAQYELKDGPTVQHAGFAHHHPAFYPYGQYQFGDPSRP
KNATRESTSTLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKM
TWAPRNRTDEEGNVYPSDHEGDEGDKREDEEEIDLENIDTENIESKDDLDEQDDLHSELK
IDARSDSEGSDGYEDLPEQRFLKAGLHHHHHHLQIHHRGSSPLEIKPDGDKLSSGPVSSP
PSENSQAPAQKPKIWSLAETAAAPDNPRKSPQVTPTPPTSHQQHGLMAPHRLIASCPAVG
KIQSWTNRAFSAHQLALFNSNHYLGLANQAGGGLALYGSSRHTDDKGAGQAAGAGADSAL
TGTGPRH
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccccaactgggctaccagtacatccggcccgtgtaccctccggagcgccag
ggcatggccggcaacgcccggagcgcagccgccgcagcagcagccgcagccgccgccgag
ctcagtccgtcgggagcgctctccaacgtactctccatgtacggagcgccgttcgccgcc
gcggccgcgcagggctacggagccttcctgccctactccaatgacatctccatatttaac
cagctgggggcccagtacgaactgaaggacggccctacggttcagcacgccggcttcgcc
caccaccacccggctttttacccgtacggccagtaccagttcggtgacccgtcccggccc
aagaatgccacgcgggagagtaccagtaccctgaaggcctggctgagcgagcaccgcaag
aacccgtaccccaccaaaggcgagaagatcatgctggccatcatcaccaagatgactctg
acccaggtctccacttggttcgctaacgcgcgcaggaggctcaagaaggaaaacaaaatg
acgtgggcgcctcggaaccgaaccgacgaggaaggcaatgtctaccctagcgaccacgag
ggcgatgagggcgacaagcgggaggacgaggaggagatcgacttggagaacatcgacacg
gagaatatcgagagcaaggacgacctggacgagcaggacgacctgcattcggaactcaaa
attgacgcgaggagcgactcggagggttcggacggctatgaggatttacccgagcaaaga
tttctcaaggctggcctgcaccaccatcaccaccacctccaaattcaccaccgcggctcg
tctccgctggagatcaaacctgacggggacaaacttagttcgggtccggtcagctccccg
ccctcggagaacagccaagcgccggcccagaaaccaaagatctggtctctggcggagaca
gccgcggcgccggacaatccgcgcaagtcgccgcaagtgactcccacgccccctacgtcc
caccagcaacacggcctcatggccccgcacagactcattgcgtcttgtcccgccgttggg
aagatccagtcgtggacaaaccgagccttctcggcgcatcagctggccctgttcaactcc
aaccactacttgggcttggccaaccaggctggaggtgggctggcgctgtacggaagcagc
cggcacacggacgacaagggggccgggcaagcggccggtgccggtgcggactctgcgctc
acaggtaccggtccacgacactga
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