Syngnathus scovelli (Gulf pipefish): 125966979
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Entry
125966979 CDS
T08785
Symbol
celf1
Name
(RefSeq) CUGBP Elav-like family member 1 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125966979 (celf1)
Spliceosome [BR:
sscv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125966979 (celf1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
RRM_7
RRM_5
RRM_Nup35
DUF6173
Motif
Other DBs
NCBI-GeneID:
125966979
NCBI-ProteinID:
XP_049573572
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All DBs
Position
4:23896407..23905389
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AA seq
519 aa
AA seq
DB search
MASFKLDFLPEMMVDHCSLNSGPVGKKMNGSLDHPDQPDVDAIKMFVGQIPRSWSEEQLR
ELFEPYGAVYEINVLKDRSQNPPQSKGCCFITYYTRKSALEAQNALHNMKILPGMHHPIQ
MKPADSEKNNAVEDRKLFIGMISKKCTENDMRLMFSPYGQIEECRILRGPDGLSRGCAFV
TFTARQMAQAAIKSMHQSQTMEGCSSPVVVKFADTQKDKEQKRLALQLQQQMQQLSAASM
WGNLSGLGALGPQYLAIYLQLLQQSASAGNALGNPHPAAVCTSGLNAMQNLAALAAATAS
QASGTGSGAMTASSSPLSALTSSGSSPTSSSVSSVNPAAGSLGTLQSLAAGAGAGLNVGS
LAGMAALNGSLGSGGLSNGSGGTMEALSQAYSGIQQYAAAAAAATALPGLYNQSLLSQQS
VSAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFAPFGNVISAKVFIDKQTNLSKCFGFV
SYDNPVSSQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttttaaactggacttcctcccggagatgatggtggatcattgctcgttgaac
tccggtcctgttggcaagaagatgaacgggtccttggaccaccccgatcagccggacgtg
gacgccatcaagatgtttgtgggccagatcccgcgctcctggtcggaggagcagctgcgc
gagctctttgagccgtacggcgccgtgtacgagatcaacgttctcaaggaccgcagccag
aacccgccgcagagcaaaggctgctgtttcatcacatactacacccgcaagtcggccttg
gaagcgcagaacgctctacacaacatgaagattctaccagggatgcaccaccccatccag
atgaagccggctgacagcgagaagaataacgccgtggaggacaggaagctgttcatcggc
atgatctccaagaagtgtaccgagaacgacatgcgcttgatgttctcgccctacggccag
atcgaagagtgtcgcatacttcggggccccgatggactgagccgaggctgcgcctttgtg
accttcacagctagacagatggcccaggccgccatcaagtccatgcaccagtcacagacc
atggagggctgctcgtcacccgtggtggtcaagtttgccgacacccagaaggacaaagag
cagaaacgcttggcgcttcaactgcagcagcagatgcagcaactcagcgccgcgtccatg
tggggcaacctgagcgggctgggagctctgggcccgcagtacctggccatttacttgcag
ctgctgcagcagtcggcctcggcggggaacgcactcggcaacccgcaccccgctgcagtg
tgcacatcaggtctgaatgccatgcagaatttggccgccttggcagcagcgaccgccagc
caggcctcaggaaccggctcgggcgccatgaccgcatcaagcagtcccctaagtgcactc
accagctcaggctcgtcgcccacctccagcagcgtgtcgtccgtcaaccccgccgccggg
tctctgggaacgctgcagtctctggccgccggcgcgggagccggcctcaacgtgggctcg
ctcgcaggaatggccgctctgaacggcagcctgggctcgggaggcctgtccaacggctcc
gggggcaccatggaggcgctgagtcaggcttactccggaatccagcagtacgccgccgct
gccgccgccgccaccgcgctgccgggactctacaaccaaagcctgctgtcgcagcagagc
gtctcggccgcgggcagccaaaaggaaggtccggaaggcgccaacctcttcatttaccac
ctgcctcaagagttcggcgaccaggacctgctccagatgtttgcgcccttcggcaacgtc
atctcggccaaggtcttcattgacaagcagaccaacctcagcaagtgttttggcttcgtg
agttacgacaacccggtgtcgtcgcaggccgccatccagtccatgaacggatttcagatc
ggcatgaagcgcctcaaggtgcagctcaagcgctccaagaacgacagcaagccctactga
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