Syngnathus scovelli (Gulf pipefish): 125967072
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Entry
125967072 CDS
T08785
Name
(RefSeq) sodium/potassium/calcium exchanger 1 isoform X1
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
125967072
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sscv02000
]
125967072
Transporters [BR:
sscv02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
125967072
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
PBP1_TM
PRIMA1
Ephrin_rec_like
Motif
Other DBs
NCBI-GeneID:
125967072
NCBI-ProteinID:
XP_049573742
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Position
4:8091747..8109806
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AA seq
727 aa
AA seq
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MGTINVAPRPRRLRRSRVFFFISGVLLCFFYMLTLKARLSNLRVSLSIHTRDIVEEKGGD
EAVEEVSVPKLTAPNVTQEQVQSPKSTQATVVIVNRTDIEQCIYVEPQPPKPPPPTVATP
PHQPPTRKGEYPEDIFSVEQRRQGLVVLHTVGMIYMFVALAIVCDEFFVPALEVITNKLE
ISDDVAGATFMAAGGSAPELFTSLIGVFVSHSNVGIGTIVGSAVFNILFVIGMCAIFSRE
MLHLTWWPLFRDVSFYILDLMMLIIFFLDNTILWWESTMLVLGYISYVCCMKFNSQIERL
VKTQLNKHVSIVQAWTTDEPDKEGEMLPPSPPPPPPAAPAAMSIDEGKSGEQPEPTQSSL
ASKPTDLQSDKAKLKVRPALQRGGSTASLHNTSLRSTIFQLMIHTLDPLGEDSTLGGAHI
PPGARRARGETSFNGDIKAKGFMQKKDDDHEAKCEKCPPGTEEPSTSQLPAEQVPKNMTD
KQDGSKESSGGRSGDESTDADSNASSESEDDDGDKEEEEEENKPLSLDWPESRRKQVTYL
LLLPIVFPLWLTLPDVRNPTSKKYFAFTFIGTILWIAVFSYLMVWWAHQVGETIGISEEI
MGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPVPWLLYSLLHNGQ
PVTVSSNGLFCAIVLLFLMLLFVIISIATCHWKMSRTLGLTMFALYFVFLVLSVLLEDRV
LVCPVSI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggggacaataaatgtggcccctcgtccgaggagactccgacgcagtcgtgtcttcttc
ttcatctcaggtgtgctcttgtgtttcttctatatgttgacactgaaagccaggctgtca
aacctcagagtgtcactctccatccatacgcgggacattgtggaagaaaaaggaggagat
gaagctgttgaggaggtcagcgttccaaaattaacggcacctaatgtaacacaggaacaa
gtccagtcaccgaagagtacccaagccactgtcgttattgttaacaggacagatattgag
cagtgtatctatgtggaaccccaacctccaaaacctccaccgcccaccgtagcaaccccc
cctcaccaaccgccgaccaggaagggcgagtacccggaggatatcttctctgtggaacag
cgacgtcaaggcttggtggttctccataccgttgggatgatttatatgtttgtggccctt
gctatcgtctgcgatgaattttttgtccctgctctggaggtcattacgaacaagctggaa
atctccgatgatgtggccggtgccaccttcatggcagccggtggttcagctccggagctt
ttcacttccctgattggcgtttttgtctcccacagcaacgtgggtatcggcacaatcgta
ggctcggcggtcttcaacatcctcttcgtgataggcatgtgtgccatcttctctcgggag
atgttgcacctaacctggtggccgctcttccgggatgtgtccttttacattttggacctc
atgatgctcatcatcttcttcctggataacacaattctgtggtgggagagcaccatgttg
gtactaggctacataagctacgtgtgctgcatgaaattcaacagccagattgagcgcttg
gtgaagacacagctcaacaaacatgtgagcatcgtacaagcctggaccactgatgagcct
gacaaggagggtgaaatgttgccgccttctccgcctccccctccacctgccgctcctgct
gctatgtccatcgatgagggtaaatctggagaacaaccagagccaactcagagctctcta
gcaagcaaaccgacagatctccaatcggacaaagccaaactcaaggtgcgtcctgccctg
cagcgaggcgggagcacagcctccctccacaacacctcgttgaggagcaccatcttccaa
ctgatgatccacaccctggaccctctgggggaagactcaacccttggaggggcgcacata
ccccctggcgcgagaagagctaggggagagacgtcttttaacggtgacatcaaagcgaag
gggtttatgcagaaaaaagatgacgatcacgaggcaaaatgtgagaagtgtccgcctggt
acagaggagccgtcgacctcccagcttccagctgagcaggtgccaaagaacatgacagac
aaacaggatggctcaaaggaaagctcaggtggtagaagtggcgacgagagcactgacgca
gatagcaatgcatcgagtgaaagtgaggatgatgatggagacaaagaggaagaggaggag
gagaacaagcccttgtctttagattggcccgaaagcagacgcaagcaggtcacgtatctg
ctcctgctgcccatcgtgttcccgctgtggctcacgctgcctgacgtccgcaacccgaca
tccaagaaatactttgcctttacatttattggcacaatcttgtggattgcagttttctcc
tacctgatggtgtggtgggctcatcaggtgggtgagacgatcggtatctcggaggaaatc
atgggtctcaccatcttggcagccggtacgtccatccctgacctcatcaccagtgtcatc
gtggctcgcaaaggtctgggcgacatggctgtgtccagctcagttggcagcaacatcttt
gacatcactgttggtctaccggtcccgtggctcttgtactcgctgttgcacaacggccag
ccagtgaccgtcagctccaacggcctgttctgcgccattgtgctcctctttcttatgcta
ctcttcgtcatcatctccatcgctacgtgtcactggaagatgagccgaacgctgggcctc
accatgttcgcgctctactttgtgttccttgtcctcagtgtcctactggaggaccgcgtc
cttgtttgccccgtctccatataa
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