Syngnathus scovelli (Gulf pipefish): 125967081
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Entry
125967081 CDS
T08785
Symbol
kdr
Name
(RefSeq) vascular endothelial growth factor receptor 2 isoform X1
KO
K05098
kinase insert domain protein receptor [EC:
2.7.10.1
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04010
MAPK signaling pathway
sscv04020
Calcium signaling pathway
sscv04370
VEGF signaling pathway
sscv04510
Focal adhesion
sscv04517
IgSF CAM signaling
sscv04518
Integrin signaling
sscv04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125967081 (kdr)
04370 VEGF signaling pathway
125967081 (kdr)
04020 Calcium signaling pathway
125967081 (kdr)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125967081 (kdr)
04518 Integrin signaling
125967081 (kdr)
04519 Cadherin signaling
125967081 (kdr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125967081 (kdr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sscv01001
]
125967081 (kdr)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sscv04090
]
125967081 (kdr)
Enzymes [BR:
sscv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
125967081 (kdr)
Protein kinases [BR:
sscv01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
125967081 (kdr)
CD molecules [BR:
sscv04090
]
Proteins
125967081 (kdr)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Pkinase
VEGFR1-3_N_Ig-like
Ig_VEGFR-1-like_5th
Ig_2
ig
VEGFR-1-like_Ig-like
VEGFR-2_TMD
V-set
Ig_PDGFR_d4
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
125967081
NCBI-ProteinID:
XP_049573762
LinkDB
All DBs
Position
10:complement(3175663..3185013)
Genome browser
AA seq
1333 aa
AA seq
DB search
MARALFIVVFSLELCYGAAIELRFTSDPPLLNIHGVHRMNKSDNLELTCSGRQYLRWTTP
PTSARFSISDCSGSGLFCTELRITNATVNETGQYRCSYRNLKTESSKTSTAVHVFVHDDK
VPFVPSEKEYEVVFIREGERVVIPCRGSLENLNVTLHTKYPNKEFHPDGKDSLWDARTGF
TIPSHLISYAGVVSCQTRIGDETFKSPLYVVAVVGYKIYDLILTPAQVRLSVGERLVLSC
TAYTELNVGIEFNWTHAGQPLIAGNGSRAAHMTPYKKKLWDSLELSNTLVVDNVTVEHTG
EYTCTASSGAMEKSVTAFLKVYEKPFIDIKEPWTKVWEVNMGGLSPTTIPVRYTAYPEPS
FKWFKNGLPLKEDHRIKQRSDALIFRGVTETDMGNYTIVLSNKVTKDEQRRSFQLLVNVP
PHIIEKEVAVDTDVFLYGSTPTLRCTARGFPTPTYIQWQWMSTDNCPEAFVPGLSKSEEQ
IVYCKAWRDIHNGTAHNRVEQISTDVDHGQKKMVSSLKFHEAKVDALYRCTAANKVGKDS
RVIFFHVTRGLELSMSPSNEPLEEDHVSLRCKVDGLIYGNLAWFRVSNSSGWERAAAAQP
CRSLALPPTPLLRLDTSNGERGANVSLELVLPYASRRDEGLYACQVESLKTRERTCLLRH
LSLKGLEAPRILNNLTDQKVNVSATVSLLCAAAGTPDPTVVWTKNNQTVVEGSGVILSRR
GHLLTIQRVKMDDGGLYSCSACNSRGCDTSQAVLTTEDAEEKTNVELIVPIGSVVFAMFL
WLLLVFVFRRRKRANRGDLKTGYLSMILDSEDVPMDEQCERLTYDANKWEFPRDRLKLGD
PLGRGAFGQVVEAAAFGIEKIATCTTVAVKMLKEGATSSEFRALMSELKILIHIGHHLNV
VNLLGACTKPGGPLMVIVEYCKHGNLSSYLKSKRGEYSPYKRKRTDSQRWTAAEVDVTEG
DLGLGKIAQLDICTGTADRASGSHLTPQDESTDDDHLTMEDLICYSFQVAKGMEFLSSRK
CIHRDLAARNILLSENNVVKICDFGLARDVYKDPDYVRKGDARLPLKWMAPETIFDRVYT
TQSDVWSFGVLLWEIFSLGASPYPGVCIDETFCRRLKEGTRMRPPEYATSEIYQTMLDCW
LDRPTDRPTFADLVEHLGNLLQASAHQDGKDYIPLKAEGDAAGALSYTTPQNRDNLEAQP
HYDNALALGQGEMCSRRLSVKTFDDVPVEHSSVMEGHMDCSPEEVISSSPQLSMTPNLSQ
LMRCKSKESLASESSNQTSGYQSGYHSDDADAPIYANEEAIVKHSMLLKKQKTPPAPPVP
KFGAEIRYSTPPV
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atggctcgggcactttttattgttgtttttagtttggaactttgctatggtgctgctatc
gagctgcgcttcacctccgacccaccgttgctgaacatccacggcgtccatcggatgaac
aaatccgacaacctggagctcacgtgcagcggccgccagtacctgcgttggaccacccct
cccaccagcgctcgcttttccatcagcgactgtagcgggtcgggtctcttttgcacggag
ctgcggatcaccaacgccaccgtcaacgaaacgggacaataccgatgctcctaccgcaat
ctcaaaacggaaagcagcaagacatcaacggcggttcacgtttttgttcatgatgacaag
gtgccgtttgttccgtccgagaaggaatacgaggtggtgttcatccgggaaggcgagcgg
gtggtcataccgtgccgaggatctctggagaacctcaacgtgacacttcatactaagtat
ccaaacaaagagttccatccagatgggaaagactccctgtgggacgccagaaccggcttc
accatccctagtcatctaatcagctacgccggcgtggtctcctgccagacccgcatcggc
gacgagaccttcaagtcccccctctacgtggtggctgttgtgggatacaagatttacgac
ctcattctgacccccgcgcaagtcaggctgtccgtcggtgagcgtctggtgctcagctgt
accgcgtacactgaactcaacgtgggcatcgagttcaactggacgcacgccggccaacct
ctgatagcggggaacggttcaagggcggctcacatgacgccgtacaagaagaagctgtgg
gattctctggagttatccaacacactggtggtggacaacgtgaccgtggaacacaccgga
gaatacacctgcacggcctccagtggagccatggagaaaagcgtcacagccttcctcaag
gtttacgaaaagccgttcattgacatcaaggagccttggaccaaagtatgggaggtgaat
atgggaggcttgtcacccaccaccatacccgttcgctacacagcctaccccgaaccgagc
tttaaatggttcaaaaatggcctcccgctgaaggaagaccaccggatcaagcagagaagc
gacgccctcatctttcgcggcgtcaccgaaaccgacatggggaactacactatcgtcctc
agcaacaaagtcaccaaagatgagcaaaggagatctttccagcttctggttaatgttcct
cctcatatcattgagaaggaagtggcggtggacacggacgtttttttgtacggcagcacc
ccgacgctgcgatgcaccgcccgaggttttcccactcccacgtacatccagtggcagtgg
atgtccaccgacaactgtcccgaggcttttgtgccaggactgtccaaatctgaggagcaa
atagtctactgcaaagcttggcgtgacatccataacggcaccgcgcacaaccgtgtggag
cagatctccactgatgtggatcatggccagaagaaaatggtgagctccttgaagttccac
gaagccaaagtcgacgccctgtaccgatgcacggccgccaacaaagtgggaaaggattcc
cgtgttattttcttccacgtgacacgcggcctggagctgagcatgtctccgtccaacgaa
cctctggaggaggaccacgtgtctctccgctgcaaggtcgacgggttgatatacggcaac
ctggcctggttccgcgtttccaacagttccgggtgggagcgggcggcggccgcgcaaccg
tgccgctcgttggcgctgccgccaacgccgttgcttcgcctcgacacgtccaatggcgag
cgtggcgccaacgtgagtttggagctagtgcttccctatgcttcccgacgggacgagggc
ctgtacgcctgccaggtggagagcctcaagaccagggagaggacttgtctgctgcgccac
ctatcactcaaaggtctggaggcgccgaggatcctcaacaacctcaccgaccaaaaagtc
aacgtgagcgccactgtctcgctcctgtgcgccgccgccggcacgcccgacccgacggtg
gtgtggaccaaaaacaaccagactgtggttgaaggctccggtgtgatcctgagtcggcgt
ggtcatctgctcaccatccagcgtgtcaagatggacgatggcggcttgtacagctgctct
gcttgcaacagccgaggatgcgacacctcgcaagccgtgttgactacagaagacgcggag
gaaaaaaccaacgtggagctgatcgttcccatcggctcggtggtcttcgccatgttttta
tggctactcctcgtctttgtcttccgtaggagaaaacgagccaaccgtggcgatctcaag
acgggctacctctccatgatcctggattcggaggacgtgcccatggacgagcagtgcgaa
cggctcacttacgacgcaaacaagtgggagttccctcgggacaggctaaagcttggtgac
ccgctgggacgaggcgctttcggtcaggttgtggaagccgccgccttcgggatcgagaaa
atcgccacctgcaccaccgtggccgttaagatgcttaaagagggagccacgtccagcgag
ttccgagctttgatgtcagaattgaagatcctgatccatattggacatcatctgaatgtg
gtcaaccttctgggagcctgcaccaagcctggtggccctctcatggtcatcgtggagtac
tgcaaacacggaaacctctccagttacttgaagagcaaacgtggagaatacagcccgtat
aagagaaagagaacagacagccaaaggtggacggccgcagaagtcgacgtgaccgaaggt
gatctcggcctggggaagatcgctcagctggacatctgcaccgggactgccgacagagct
tcaggcagccacctgacaccccaggatgagagcacagatgatgaccacctgaccatggag
gacctgatctgctacagtttccaggtggccaaaggaatggagttcctgtcctctcgcaag
tgcatccacagagatctggccgccaggaacatcttgctctcggagaacaacgtggtaaag
atctgtgactttggcctggctagggatgtctacaaagacccggattacgttcgcaaggga
gatgcacggcttcctttgaagtggatggcgccagagaccatcttcgaccgggtgtacacc
acccaaagtgatgtctggtcctttggggtccttctctgggagatcttttcgctgggagca
tctccctatcctggcgtgtgcatcgacgagactttctgccgacggcttaaagaaggcacc
aggatgagaccaccagagtacgccacctcggagatataccagaccatgttggactgctgg
ctggaccgtcccacggacaggcctacctttgcggacctggtggagcatctgggcaatttg
ctgcaggccagcgctcatcaggacggcaaggactacatcccactgaaggcagaaggcgac
gcggcgggagctctgtcttacaccacgcctcagaacagagacaacctggaagctcagccg
cactatgacaacgctcttgctctcgggcagggcgaaatgtgcagtcggaggcttagcgtg
aagacctttgatgatgtccctgtggagcacagcagcgtcatggagggtcacatggactgt
tcacctgaggaagtgataagttcgagtccgcagctctcaatgacgcccaacttgagccag
ctgatgcgttgcaaaagcaaagaatccctggcgtccgagtcctccaaccagacgagcggc
taccagtcgggctaccactcggacgacgccgacgcgcccatctacgccaacgaggaggcc
atcgtcaagcacagcatgctcctaaaaaagcagaagactccacctgcgcctcccgtgccc
aaattcggcgcggagatccgttacagcacgccgcccgtctga
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