Syngnathus scovelli (Gulf pipefish): 125967115
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Entry
125967115 CDS
T08785
Symbol
dmxl2
Name
(RefSeq) dmX-like protein 2 isoform X1
KO
K24155
rabconnectin-3a
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
125967115 (dmxl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125967115 (dmxl2)
Membrane trafficking [BR:
sscv04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125967115 (dmxl2)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
125967115 (dmxl2)
RAVE complex
125967115 (dmxl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_IFT140_1st
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_DCAF12
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_LRRK2
Beta-prop_DCAF4
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_RIG_1st
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
125967115
NCBI-ProteinID:
XP_049573808
LinkDB
All DBs
Position
4:complement(12325814..12354846)
Genome browser
AA seq
3114 aa
AA seq
DB search
MHLHQVLTGAVNPGDCCYSVGSVNDVPFTAYGSGCDVVILASDFECVQIIPGAQNGNIQV
GCVECSHQLGRIAASYGNTVCIFEPLSTNPNKRHKHLNYQWQKTGQFFLDAITYNLAWDP
QGNRILAATERLQLWAPPLADALIEEEDGQASEEKLHPVLNDWNCVWQCKTAASVHVAKW
SPDGEYFATVGKDDCLLKVWYPTTGWRSAVVVQDPADKKPPAVHFSFVYLAHPRSVTGMS
WRKTSKYMPKGSVCNVLLTSCEDGVCRLWSETLLPEDSLLGGQISENTHSFSSSLPGLAG
NKDKIQHALESIHHLKHLRRGRRRSSALVAHSELLPSQLGTQDAHTHRHIAHHANALCHF
HISASINPNTDIPSMLADSTLFNTDDGTGAGGFVVHWLNNKDLSFTCSMDLFMLQLRKYS
EQQLDHATEDPLDPEGSPLKFDFDLDEMSDKGSSELGEEAETGEQGSTKASSPGSSSSLP
LPSMLLERRMEILITEWNKSPDMLFTIHPTDGSFLVWHVKYLDEFNQGIFRQVQVSFSSR
IPVAFPTGDANSLSKNILMYACTLTERESFRAGDQGRMVQHVAHSASASAGLGLPALASS
YFPNPGTSPAVMMVSKHVDGSLNQWAVTFAEHSAFSNVMTVSHKFRYCGHRFHLNDQACH
TVLPLLLTSSHHNALLTPPSAPGSMDGEQPPTFPLPKGLPRKQLRNAATRTFHDPNAIYS
ELILWRVDHIGPLSCTGGVSELARINSLHTSAFSNVAWLPSLVPSSVLGTYCNSASACFV
ASDGKNLRLYQAVVDARKLLDELSDPETSKLVGEVFNIVSQQSTARPGCIIELDVITNQC
GSTTQLLHVFQEDFILGYKPQKEPDTHTTAFPSGEDYHPPPFSEKFFLVVIEKDLNRNSV
LQMWHLHLQSVQACVDDLNEDSSFQSQLMVPNQVMNPDSSPETSPIRPLPRSASTVNLQS
ASKLILSSKLVYSKRLDLPHGVEVTRATPSAGHLSSSSIYPVCLAPYLIVTTCSDSRVRF
WRCAVEGDHGDSDNEQDKRMYRWEPWALMNEEEDNNSAVFVSGRPVAVSCSYIGRLAVAF
KQPRQGQISGKDFSMHVSIYECESTGGSEWVLEQTLHLEEFNKPSSTLDPRVSVDSNLFV
YSRSDLYMSRDHNSPNIKHYVHLDWLSKEDGSHILTVGVGSNILMYGRISGMVNEQTSSK
EGVAVITLPLGGSIKQGIRSRWILLRAVDLLSSVDGTPSLPVSLSWVRDGILVVGMDCEM
HVYAQWHQDKKPGLGEEGNLSSADIAGGQTATSSAVFEGRTRSKSVFEGSTAVDEALRAP
AGLQEGGLFEAAHSLSPTLPQYHPTQLLELMDLGKVRRAKAILAHLVKCIAGEVAVVRDV
EAGEGGARRHLSRTISVTGSTAKDTIVAGRDGGRDYTEINSIPPLPLYALMLADEDTSFK
GAEETVKGPKVANGEAGHISAEDQYADLFQVPTVTTDDFVNFATDKPEKKSRVINLSQYG
PAYFGPEHAQVLSSHLMHSSLPGLTRLEQMFLVALADTVATTSAEVTSSTDKQYTGGEAL
DECGLRYLLAMRLHTCLLTSLPPLYRMQLLHQGLSTCHFAWAFHSEAEEELLNMIPAMQR
GDPQWSELRAVGVGWWIRNINTLRKMVEKLGKAAFQRHNDPLDAALFYLAMKKKAVLWGL
FRSQHDEKMTQFFKNNFSEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIEVLL
EKMEDLQLAMIVARLYEADFENSSTCQGLLYEKVLGCDRDGSHYHCSRLHPDPFLRSIAY
WIMKDYTQALDTLLERTPKDDDDNPDVMVKSCNPVVFSFYNYLRTHPLIIRRHFASSEGT
ATTVGLTAEKSSADEINLIERKLFFTTANAHFKVGCPVLALEVLSKIPKVTKKSGSSPLS
KASSKANVNSSLLLERTTGMDWASPAPPAWGGDDNAGGMDWSQPIGKSEDDELKLDWGDD
KDDDEDDNEDCLTMKKLETETKAQGTFETKLQRDDSQGESEVDVIAEQLKFRACLKILMT
ELRTLATGFEVDGGKLRFQLYSWLEKEIAAIHNICNYKVEGKEQESEAENWVERAASVDI
SDDMFERIDACAYERHQMERRRLQAKQQHSERRKAWLRKNQALLRVFLSYCSLHGAKGGG
VTSVRMELLFLLQESQQEITVKQLQSPLPLPTTLPLLSACIATTKTVIANPVLHLSNHIH
DILHTITLMEAPPHPDIIDDRVNALHTLAASLSACIYQALCDSHSYSSQTEANQFTGMVY
QGLLLSERKRLRTESIEEHITPNSAPAQWPGVSSLISLLTSAREEDQPRLNVLLCEAVMA
VYLALLIHGLGTHNSNELFRLAAHPLNNRMWAAVFGGGAKVIIKPKRPEAPPVPADFEAA
RPEESQESRRPEQGNLTQTPKPIPYETQCPKQYPPLVSRGGGPGTVAPATKTSLVPTQPP
AEDGDRYRRRFNMRMLVPGRPVKETPAAPPPLPTERPTYREKFIPPELSMWDYFVAKPFL
PLSESNALCDSDESGAEDDEDDDDAFLSDTQMTEHSDPNSYSWALIRLVMVKLFHHSIKN
FLPITGLDFADLPVTSPFTNAVLKTLENWEHILLETMNKFDGPPPNYINTYPTDLSAGGG
PAILRHKAMLEPDNTPFKTKNHQSFPARRLWHFLVKQEVLQETLIRYIFTKKRKQSESVD
NHTDHVRPNCVAGGSGPNKVEADLGYPGGKAKIIHKESDIIMAFAINKANSNEIVLASTH
DVQEVDVSTLVAVQPYTWIGEDFDKESRSSDDVDYKSSHTNIAQASSGPFAPPQIPVSAS
MPWLGSGQTSMGASVIMKRNLNNVKRMTSHPIYQYYMTGAQDGSVRMFEWNRPQQLICFR
QAGNARVTRLYFNSQGNKCGVADGEGFLSLWQVNQTSSNPKPYLSWQCYTKTCGDFAFIT
SSSLIATAGQSNDNRNVCLWDTLISPSNTMVHAFPCHENGATVLQYAPKQQLLITGGRKG
FVCVFDIRQRQLLHTFQAHDSAIKALALDAFEDFFVTGSAEGNMKVWKLAGHGLMHSFGS
EHAKQSIFRNIGAGVMQVETRPSNRIFTCGADGTLKMRVLPDRYNIPSSLVDVL
NT seq
9345 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcatcaggtgctgacgggagcagtgaaccccggggattgctgctactcggtg
gggagcgtgaatgacgttccgttcacggcttatggctcaggttgtgacgtggtgatcttg
gctagtgacttcgagtgtgtgcagataatcccaggagcacagaatgggaacattcaggtg
ggctgtgtggagtgctcccatcagctcggcaggattgctgcctcctatggaaacacagtc
tgcatctttgaacctctctctaccaacccaaacaaacggcacaagcatcttaactatcag
tggcaaaagacagggcagttcttccttgacgccatcacctacaacctggcctgggaccca
caggggaaccgtatcctagcagcaaccgagcggctccagctgtgggccccaccgctggca
gacgccctaattgaagaggaggatggccaggcgtctgaggaaaagctccatcccgttctt
aatgactggaactgcgtctggcagtgcaagactgctgcatctgtgcacgttgccaagtgg
tcccctgatggagagtactttgcaacagttggaaaggatgactgtttactcaaagtgtgg
tatcccaccacgggctggcgttccgcagtggtcgttcaggaccccgcggataagaaacca
cccgccgttcacttctcttttgtttacctggcccatcctcgctcggtcactggtatgtcc
tggaggaagactagcaagtacatgccaaagggttcggtgtgcaatgttttgctgacatct
tgtgaggatggcgtgtgtaggctgtggtctgagaccctgcttccagaagacagcttgctt
ggggggcaaatatctgagaacacgcactcgtttagctctagcttgccaggcttggcaggc
aacaaggacaagattcaacatgccttggagtctattcaccacctgaagcatctgcgtcgg
ggaaggcgacgatcatctgctttggtagctcacagtgagctgctcccctctcagcttggc
acgcaggatgcacacactcatcgccacattgctcatcatgccaacgcattgtgtcacttc
cacatttcagccagcattaatcccaacacagacatcccatcaatgctggcagactctacg
ctcttcaacacagatgatggcaccggggcaggaggatttgtggttcattggcttaataat
aaagatctaagcttcacctgctcgatggatctttttatgctacagcttcgcaagtactct
gaacagcagctagatcatgcaacagaagaccccctggaccccgaaggatcccctttgaag
tttgactttgacctggatgagatgtctgacaaaggctcatctgaacttggagaggaagcg
gagacaggggagcagggaagcacaaaggcatcctcaccaggatccagctccagcttgcct
ttgccctcaatgctcctggaaaggaggatggagattctaatcacagagtggaataagagt
cctgacatgttgttcaccatccacccaactgatggctctttccttgtttggcatgtcaag
tacttggatgaatttaaccaagggatcttccgacaggttcaggtgtcgttttcctcccgt
atcccagtggcatttcctacaggcgatgccaactctctgagtaaaaacatcttgatgtat
gcctgtactttgaccgagagggagagtttcagagcaggcgatcaaggaaggatggttcaa
catgtcgctcactctgcctcagcctcggccggccttggcttgcctgcattagcctcttct
tattttcctaatcccggcactagtcctgcagttatgatggtctccaagcatgttgacgga
tctcttaaccagtgggccgtgacattcgctgagcactccgcattctccaatgtgatgacc
gtatcccacaaatttcgctattgcggccaccgtttccatttgaatgaccaagcctgtcat
acagtgctgccactgctgctcacatcctcgcaccataatgcactgcttacacctccctcg
gctcctggaagcatggatggggaacaacctcccacttttccccttccgaagggacttcca
aggaagcagcttcgcaatgcagcgacaaggaccttccatgaccccaatgccatctacagt
gaactcatcttgtggcgagtggatcacattggaccactgtcatgcaccggaggggtctcc
gaactggctcggatcaactcgctgcacacctctgctttcagcaatgttgcttggctgcct
tcacttgtccccagctctgtacttggaacatactgtaatagtgccagtgcctgctttgtg
gcatcagatggtaagaaccttcgtctgtaccaagcggtggtcgatgccagaaagctacta
gatgaactctcagatccggaaacatctaaactagttggtgaagtcttcaacattgtcagt
cagcagtctaccgccagacctggctgtatcatagagctggatgtcattacaaaccagtgt
ggttccaccacgcagctgctccatgtcttccaagaggacttcattctaggttacaaacct
caaaaagaaccagacacacacacaactgcttttccatctggtgaagattaccaccctcca
ccattttcggagaagtttttcctggtggtgatagaaaaggatctcaacaggaactcagtg
ctacaaatgtggcacttgcacctccagtctgttcaggcctgtgttgatgatctgaacgaa
gattctagcttccagagccagctcatggttcccaatcaagtcatgaatcccgactcatct
ccagagacctcccctatcaggcctcttccacgctcagcctccacagtcaacttgcagtca
gccagcaaactcatccttagttccaaactggtgtacagcaagcgactagacctgcctcat
ggggtagaggttaccagagccacaccgtctgctggtcatctcagttcctcctccatctac
cccgtctgcttggctccttatctgattgtgactacctgctctgactctcgggtgcggttc
tggcgttgtgccgtggagggtgatcatggagatagtgacaatgagcaggacaagaggatg
taccgctgggagccgtgggctctaatgaacgaagaggaagacaacaacagcgctgtgttt
gtgtcagggcggcctgttgccgtgtcatgctcctacattggtaggctggctgtggctttt
aaacagccacgtcaaggacagatttctgggaaagatttctccatgcatgtgtctatctat
gagtgtgaatcaactggtggttcagagtgggttttggagcaaactctccacttggaagaa
ttcaacaaaccctcatcaaccttggacccgagagtcagcgtggactctaacctctttgtt
tacagcaggtcggacctgtacatgagccgagaccacaactcacccaacatcaagcattac
gtccatttggattggttgtcaaaagaagatggctctcacatccttacagtgggggttgga
tccaacattcttatgtacggtcgaatctctggcatggtcaatgagcagacaagcagcaaa
gaaggtgtggctgtcatcacccttcccctagggggcagtatcaaacaggggatccgctct
cgctggatcctgttaagggcagtggacctgctgtcctctgtggatggtactccttccctg
ccagtctcactctcttgggtgagggatggcatcttggtggtgggcatggattgtgagatg
catgtgtatgcccagtggcaccaggacaagaagcctggtttgggagaggagggcaaccta
tcatctgcagacattgctggaggtcaaaccgcaacttcttccgcagtctttgaagggaga
accaggtctaagagtgtttttgaaggaagcaccgcagtggatgaggccctacgtgcccca
gctggacttcaagagggtggactttttgaggcagcacactccctgtccccaactctaccc
caatatcatcccacccagttgcttgagctcatggatttgggaaaggttcgccgcgccaag
gccattctcgctcatttggtgaagtgtattgctggggaggttgctgtagtaagagatgta
gaggcaggtgagggtggagccagaagacatctgtccagaaccatcagtgtgaccggcagc
accgcaaaagacaccatcgtagccggtcgtgacggaggaagggactataccgaaatcaac
tccatccccccactgcctctctacgcgctcatgttggctgacgaagacacatccttcaag
ggggcagaagaaactgtcaaaggacccaaagtggccaacggtgaggcagggcacatttcg
gccgaggaccagtatgctgacctcttccaggtgccaacagtcaccacagacgactttgtg
aactttgccactgacaaacctgagaagaaatctcgtgttatcaacctctcacagtacggt
cctgcctactttggaccagaacatgcacaggtgttgtccagtcaccttatgcattccagc
ctccctggactaacccgactcgagcaaatgttcttggtggcccttgctgacacggtagca
accactagtgctgaggtcaccagctccactgacaaacaatacacaggaggcgaggctctg
gacgagtgtggactgaggtacctgctggccatgcgtcttcatacttgcctgctcacctct
ctgcccccactttaccgcatgcagcttcttcaccaaggtctgtcaacatgccattttgcc
tgggcctttcactctgaggcagaggaggagctgctgaatatgattccggccatgcagaga
ggtgacccccagtggtctgaactccgagctgttggtgttggttggtggatacgcaacatc
aacaccttgcggaaaatggtggagaagttgggcaaagctgcattccagaggcacaatgac
cccttagatgctgctctcttctacctggccatgaagaaaaaggctgtcctgtgggggctc
ttcagatcccaacatgatgagaagatgactcagttcttcaagaataatttcagtgaagac
cggtggaggaaggcagctctaaaaaatgctttttccctgcttggaaagcaacgctttgaa
cagtcggctgctttcttcctgctggctggatcactcaaagatgcaatagaggtgttgctg
gagaagatggaggacctccagttagccatgatagttgctcggctgtatgaggcagacttt
gagaattcatccacgtgccaaggcctcctttatgagaaggttcttggatgtgacagggac
ggaagtcattaccactgttctagacttcaccctgacccgttcctgcgcagtatagcgtac
tggataatgaaggattacacccaagccctggacacactcttagagcgcacccccaaagat
gatgatgataatcctgatgtgatggtcaaatcttgcaaccctgtagtgttcagtttctac
aactatctaagaacccacccactcatcatccggcggcactttgcgagttcagagggtaca
gcaaccacagtggggctcactgcagaaaaaagtagtgcggatgagatcaacctcatagag
cgcaaattgttcttcaccacagcaaatgcacatttcaaggtgggctgccccgttctggcc
ctcgaggttctctccaaaattcccaaagtcaccaagaaatcaggctcctctcccctgagc
aaggcttcatccaaggccaacgtaaactcaagcctgctattagaacggaccacaggtatg
gactgggcttcccctgctcccccggcttggggaggagatgacaatgcaggtgggatggac
tggagccaacccattggcaagtcggaagacgatgagctaaagctcgactggggggatgac
aaggacgatgatgaagacgacaatgaggattgtctgacgatgaagaaacttgaaactgaa
acgaaagcacagggaacttttgaaactaaactacagagagatgactcacagggtgagtct
gaggtggatgtgatagcagagcagctgaagttccgtgcctgcctaaaaatcctaatgaca
gagttgcgcacactagccaccggctttgaggtggatggaggcaaacttcgttttcagctc
tacagttggctggaaaaggagattgcagccattcataacatctgcaactacaaggtggaa
ggcaaggagcaagagtcagaagcagagaactgggtggaacgagcagcatccgtggatata
tcagatgacatgtttgagagaatagacgcctgtgcctatgagcgtcaccaaatggagcga
cggcgccttcaagctaagcagcagcattcagaaaggcgcaaggcttggctgaggaagaac
caggccctcctccgggttttcctctcttactgcagtcttcatggagccaagggcggagga
gtcacctctgtacgcatggagctcctgttccttctgcaggaaagccaacaggagatcaca
gtgaagcagctgcagtctcccctccctcttccaactaccttgcctctgctctcggcctgc
attgccaccaccaaaaccgtcatagccaaccccgtgcttcatctcagcaaccacattcat
gatatcttgcacaccatcaccctcatggaggctccgccgcatccagatatcatagatgac
cgggtaaatgctctacacacactggcagcatctctgtctgcttgcatctatcaggcactt
tgtgacagccatagttacagcagccagacagaggccaatcagtttactggaatggtgtac
caggggttgttgctcagtgagaggaaacgactccgcacagaaagcatagaggaacatatc
actccaaactctgctcctgcgcagtggccaggtgtgtcgtccctgatttctctgttgacg
tctgccagggaggaggaccagccaagactcaacgtgctactgtgtgaagcagtcatggct
gtttatctagccttgctcatccacggcttgggcacccacaacagcaatgaactcttccgc
cttgccgcacatcctctcaacaaccgcatgtgggccgcagtctttggaggaggggccaaa
gtcataataaagccaaagaggcccgaggccccaccagtgccagctgattttgaggcagcc
aggccagaggagtctcaggagtcacgaagacctgagcagggcaacctcacccaaaccccc
aaacccattccttatgaaacccagtgtcccaaacagtacccccctctcgtttcaagggga
ggtgggccaggcactgtggcaccagcaactaagaccagcttggtgcccactcagccccca
gctgaggatggggaccgatacaggcgcagatttaatatgaggatgctggtacctggtcgc
cctgtgaaggaaacgccagccgccccacctccgctgcccacagagagacccacgtacagg
gagaaatttattcccccagagctgagcatgtgggactattttgtggccaaacccttcctg
ccattgtcagagagcaatgctttgtgcgactctgacgaaagtggagcagaggatgatgaa
gatgatgatgacgctttcctttctgacacacagatgactgagcactctgaccccaactcc
tacagctgggctctgatccggttggttatggtgaaactgtttcatcactctattaagaac
ttcctccctatcactgggcttgactttgcagacttgccagtcacttcgccgttcacaaac
gctgtgttgaagaccctcgaaaactgggaacacattttattggagaccatgaataaattt
gatggtccacctcccaactacattaacacttaccctactgacctcagtgctggaggcggt
cctgccatactgcgacacaaggccatgctggagccagacaacactccttttaaaacaaaa
aatcatcagtcctttccagctcgacgcctgtggcattttcttgtcaaacaggaagttctt
caggagaccttaattcgttacatctttaccaagaaaaggaagcagagtgagtctgtagac
aaccatacggaccatgtaaggccaaactgcgtagctggaggtagcggtcccaacaaggtg
gaggcagatctgggctacccgggaggcaaagcaaaaatcattcacaaggagtcggacata
atcatggcatttgcaatcaacaaggctaactcaaatgaaatagtgctggcctccacccat
gatgtccaggaagttgatgtgtcaacgctggtggctgtgcaaccctacacctggatcgga
gaggactttgataaggagtcacgcagctctgacgacgtggactacaaatcatctcacacc
aacattgcccaagccagctctggtccctttgcgccaccgcagatccccgtgtccgcatcc
atgccatggctgggcagtggccagaccagcatgggggccagcgtgatcatgaagagaaat
cttaataacgtcaagagaatgacctcccaccccatatatcagtattacatgaccggagct
caggatggcagtgtgagaatgtttgaatggaacagacctcagcagctcatctgcttcaga
caagcaggcaacgctcgtgtcactcgactctatttcaactcccagggcaacaagtgcgga
gtcgctgacggagagggatttctcagcctgtggcaagtcaaccaaacatcatccaacccc
aaaccctacctgagttggcaatgttacacaaagacctgcggagattttgctttcatcaca
tcctcgagcctcatcgccactgctggacagtcgaacgataacagaaatgtgtgtctgtgg
gacacgctgatttcacccagcaataccatggtccacgccttcccatgtcacgagaatgga
gccactgtactgcagtatgcgcctaaacagcagctactgatcactgggggcagaaagggc
tttgtgtgcgtctttgatatccgccagagacaactgctccatactttccaagcccacgac
tcagccatcaaggcgctagctttggacgccttcgaggacttctttgtcactggctctgcc
gagggcaacatgaaggtgtggaagctggctggccacgggctgatgcactccttcggcagt
gagcacgccaaacaatccatcttccgcaacatcggcgccggcgtcatgcaggtggaaaca
cgtcccagtaatcgcatattcacttgtggggcggacggcaccctgaagatgagggtcctc
cccgaccgctacaatatccccagcagcttggtcgacgtcctgtaa
DBGET
integrated database retrieval system
