Syngnathus scovelli (Gulf pipefish): 125967116
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Entry
125967116 CDS
T08785
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04137
Mitophagy - animal
sscv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125967116
04137 Mitophagy - animal
125967116
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sscv01002
]
125967116
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125967116
04121 Ubiquitin system [BR:
sscv04121
]
125967116
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125967116
Peptidases and inhibitors [BR:
sscv01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125967116
Membrane trafficking [BR:
sscv04131
]
Endosome - Lysosome transport
Others
Others
125967116
Ubiquitin system [BR:
sscv04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125967116
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Rhodanese
PepSY_TM
Motif
Other DBs
NCBI-GeneID:
125967116
NCBI-ProteinID:
XP_049573812
LinkDB
All DBs
Position
Unknown
AA seq
1071 aa
AA seq
DB search
MPAVSTGAKDLYLSTSLGDLNKRTEVKADKISTKSYVQSACKIFKAAEESRLDRDEERAY
VLYMKYLTVYKIVKARPDFKQQADYLTMLGPNNVKKAIEEAEKLAESLKLRYEEVEVRKR
LEEKDRREEKKKEKEVEMTKDDSQSSSKSSVADKDSNKVKGEVNDLKNASTKTAVAAGGI
TAEKLFHMMKDQMITIIVMDARSQRDFDESHIQVPSQACISVPEEAISPGITVNQIEEKL
PNESKEQWKQRGSVDYLVLLDWFNSVTDLTIGMTLQNLKDALYKWDCMTVLRSEPLVLEG
GYESWLLFYPMFTTNAKVRSPRQNVKNANASMSQLNLSYPSLKEIKPPTPPQPEPEIRPE
PVEPSAPPLTNGVAPTEDRPPTPPESTDKLVDSVDALFSKMELSDKGSVLDTSNHPSTPK
ALPRFDRAKKPPVRFSDEPKVSLNGSDTPSVPDRSAKPAFIPSLSEEEQSQIHSEVVASM
EKARQEKEKRIQGRLLEEDRRKKELKERLAKEQSDKKKKGDEDKGHQDKKRLERQKAKEE
EDKEDHGRKEKNNKGKEQNSEAPSKSLSLDSPGPSLIISEVKREPLTRARSEEMGRSVPG
LPVGWMKFLDTVTGTFRYYHSPTNRVHLYPPEVTVPTPPAAEPKQSQLAVAPSNAKEEEE
LEQSTLKRSYSSPDISQDVREEAQKKSAAPVAPATIPTFNRETKPPSVKVHSKVELTRPS
AAKIRSLNPTFGGLGASLTGLRNLGNTCYMNSILQCLCNTPAMAEYFNNNFYLDDINRSN
ILGHKGEVAEEFGVIVKALWTGLYRCISPRDFKITIGKINDQFAGYDQQDSQELLLFLMD
GLHEDLNKADNRKRYKEEENDHLDDQMAADQAWNKHKLLNESIIVALFQGQFKSTVQCQT
CHRKSRTFETFMYLSLPLASTSKCSLQDCLRLFSKEERLTDNNKVFCRHCKAHRDSTKKL
EIWKVPPILLVHLKRFSYEGRWKQKLQTSVDFSLDTLDLSQYVIGPKQTLKRYNLFGVSN
HYGGLDGGHYTAYCKNASKQRWYKFDDHEVSEISTSSVKSSAAYILFYSAL
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcggtgtccaccggtgccaaggacctctatttgagcacctctctcggtgacctc
aataaaagaacagaggttaaggcggacaagataagcaccaaaagctatgttcagagtgcc
tgcaaaatcttcaaggcggcagaagagagtcgtctggacagagatgaggagagagcttat
gtgctctacatgaagtatctaacagtctataagattgtcaaggccagaccagacttcaag
cagcaggcggactacctgaccatgcttgggccaaacaacgtaaagaaagccatagaagaa
gctgaaaaactagcagaaagcctcaaactcaggtatgaggaagttgaagtcagaaaaaga
ctggaagagaaggacagacgagaggagaagaaaaaggagaaagaagtggagatgacgaaa
gatgacagtcaaagctcttctaaatcctcagtagcagacaaggacagcaataaggttaaa
ggagaggtgaatgatttgaagaatgcgtctactaaaactgcggtggcggcgggtgggatc
acagcggagaaacttttccacatgatgaaggaccaaatgataactatcattgtcatggat
gctcgaagccagagagactttgatgagtctcacattcaggtcccatctcaggcctgcatc
agcgtgcctgaggaggccatcagtccaggaatcactgtgaatcaaatcgaggaaaagctc
cccaatgagtctaaagagcaatggaaacagaggggatccgtggattacttagtcctgttg
gactggtttaactctgttacagatctgacaataggcatgacattgcagaacctcaaagat
gctctatataagtgggactgtatgaccgtcttgcgcagtgagccacttgtgctggaggga
ggctatgaaagctggctgctgttttacccaatgttcacaaccaatgcaaaagtccgctcg
cctcgacagaacgtcaagaatgcgaatgcctccatgtcgcagttaaacctcagttaccca
tccctcaaggaaataaaacctccaaccccacctcagccagaacctgagattagacctgag
cctgtagaaccctctgctcccccactcacaaatggagttgctcccactgaagaccgccca
cccacaccacctgagagcacagacaaattggtagactctgttgacgctcttttctctaag
atggaattgagtgacaaaggatcagtgcttgacacatctaaccatccttccacacccaag
gccctcccacggtttgaccgtgccaagaagccaccggtccgcttctcagacgagcctaaa
gtgagcctgaatggatcagacacgccctccgtccccgaccgctcggccaaaccagccttc
atcccttctttgtccgaagaagaacaaagtcagatacactcggaagtggtggcgtcaatg
gagaaagccaggcaagaaaaggagaaacgcattcaaggacgtctgctagaagaggacagg
cggaagaaggagctgaaagagaggcttgcaaaggagcaaagtgataagaaaaagaagggc
gacgaggacaaaggacatcaagacaaaaagagactagagagacagaaggcgaaggaagag
gaagacaaagaggaccatgggcgcaaagagaaaaacaataaggggaaagagcagaactct
gaagccccctccaaaagtttgtctctcgactcgcctggtccaagtctaattatcagtgag
gtcaagagggaaccactgacaagagccagaagtgaggaaatgggaaggagtgtgcctggt
ctgccagttggttggatgaagttccttgacactgtgactggaacctttcgatactaccat
tccccaaccaaccgcgtccacctttacccgcctgaggtgacggttccaacgccaccggca
gcggagccgaaacagtcgcaactagcagtggcaccctccaacgcaaaggaggaggaggag
ctggaacagtctacgttaaaacgctcctactcttccccagacatcagccaggatgtaaga
gaggaggcccagaagaagagcgctgccccagtggctcctgctaccatacccaccttcaat
agagaaaccaaacctcccagtgttaaagtccattctaaagtggagcttacacgaccttca
gccgccaaaatccgcagcctgaatccaacatttggaggcttgggtgcaagtttgaccggt
cttcgtaatcttggcaacacttgctacatgaattcaattttgcagtgtctgtgcaacaca
cctgccatggcagagtacttcaacaataatttctacctggatgatatcaacagatccaac
attctcggccataaaggggaagtggcggaggaatttggcgtgatcgtgaaagcgctgtgg
accggtctgtacaggtgcatcagtccacgagactttaagatcaccattggaaagatcaat
gatcaatttgctggctatgaccagcaagactcccaagagttgctgctctttctcatggac
ggcctccatgaggacctcaataaggcagacaacaggaagcgctacaaagaggaggaaaac
gaccacctggatgatcaaatggcggcagaccaggcttggaataaacacaagctgctgaac
gagtccatcatcgtggcgctcttccagggccagttcaagtccaccgtgcagtgtcagact
tgccaccgtaagtctcggacttttgagacgttcatgtacctgtcgctgcctctggcctcc
accagcaaatgctcacttcaggattgtctgaggttgttctccaaggaagagcgactgacg
gataacaacaaggttttctgcaggcactgcaaagctcacagagattccaccaagaagctg
gagatctggaaggtccctccaattctcttggttcacctgaagcgcttctcctatgagggt
agatggaaacagaagctgcagacttctgtagatttctcactagacactctggacctaagc
caatatgtcattggaccgaagcagaccctgaagagatataacctttttggagtgtctaac
cactatggaggtttggacggtggccattacactgcctattgtaagaacgcctcaaagcag
cgttggtacaagtttgacgatcatgaggtttctgaaatctccacttcctccgtcaaatct
tccgctgcctacattttgttttactctgccctgtga
DBGET
integrated database retrieval system
