Syngnathus scovelli (Gulf pipefish): 125967200
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Entry
125967200 CDS
T08785
Symbol
wdr76
Name
(RefSeq) WD repeat-containing protein 76
KO
K24755
WD repeat-containing protein 76
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125967200 (wdr76)
03036 Chromosome and associated proteins [BR:
sscv03036
]
125967200 (wdr76)
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125967200 (wdr76)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
125967200 (wdr76)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
125967200 (wdr76)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
125967200 (wdr76)
DSBR (double strand breaks repair)
Other DSBR factors
Others
125967200 (wdr76)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
ThylakoidFormat
Motif
Other DBs
NCBI-GeneID:
125967200
NCBI-ProteinID:
XP_049573965
LinkDB
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Position
4:complement(17970014..17974422)
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AA seq
540 aa
AA seq
DB search
MATKGFKYNTADKEMMPIQMNGLRRSSRTAPASKRLRYSPPLSPAAPRHKSKKHNMVNIQ
RKEKEDSSDAENSDGDATNGIGLSAYELERLENIKRNQAFLSSIKLLQASNELKQLSAKR
QPSQRGLPRSLPVVKEVLPPRKSLRLQNKQAEVLTLPPEPRGTDIVKQHKKPAGPLPIEP
VNMAEGSKLPPQVLQLCLEVSSGERRVERDLKEYCSSLKKMKISEARVAKVVTGRIFSAA
FHPASASLLAAGDKNGQVGLWSVGADWGNDGVLLFDPHARPVNCLAFSKAQPAQLLSLSY
DGSLRCMDVEKGALDDVYNMEDDLKTFDFLSHDCSTLVVGHWCGNVAIVDRRTPGTSHES
LHSLDPKVLRCVSVHPVQQQYFAVAESRVVNIYDVRCLKTKSQPVSQLQGHSLSISSCYF
SPCTGNRVVTSCMDNYIRVYDTSTMITEAPLLTSISHDMRTGRWLSKLSAVWDPKQEDCL
LVGSMLRPRRMQVFHESGRLMHTFTDDEHLSTVLSVTAFHPTRNSILGGNASGRLHVFAD
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaaaaggtttcaagtacaacactgccgataaggaaatgatgccaattcagatg
aatggactccggagatcatctcgaaccgccccggcttccaagcgtcttcgctactctcct
cctctttctcccgctgcaccacgacacaaaagtaagaagcacaacatggtaaacatacaa
cgcaaagaaaaagaggactcttcagatgctgaaaatagtgacggagatgccacaaatggt
ataggactctcggcgtatgaactggagcgtctggagaacattaagcggaatcaagccttc
ctttcctctatcaagctccttcaggcatccaacgagttaaagcaactgtcagccaaacgg
cagccatcacagaggggtctgccaaggtcactcccagtagtaaaagaagtcctcccgcct
cgaaagtccctgcgtctccaaaacaaacaagcagaggtcctcactcttccccctgaacca
agaggaacagatatcgtaaaacagcacaagaagcctgcagggcctctacctatcgagcca
gtcaacatggccgaaggaagcaagctaccgcctcaagttctccagctctgcttggaggtg
tcttcaggagaaagaagagtggaacgtgatttgaaagagtactgctcttcactgaagaag
atgaagataagtgaagcccgggtggccaaagttgtgacgggccgcattttctcagcggcc
ttccaccctgcttcggcgagtctcctggccgccggcgacaagaatggccaagtgggcctc
tggagtgtgggtgccgactggggcaacgacggcgttctgctgtttgatccccacgctcgc
ccggtgaactgcttggccttctccaaggctcaacccgctcagctgctgagtctcagttat
gatggatccctgcgctgcatggatgtggagaagggcgccttagatgatgtatacaacatg
gaagacgacctgaaaaccttcgacttcctgtcacatgattgctcgacgctcgtggtcggg
cactggtgtggaaacgtcgccattgtggaccggcgtacaccaggaacgtcacacgagtct
ctccactcgctggacccaaaggttctacgctgtgtcagcgtccatcctgtacagcaacaa
tactttgccgtggctgagagcagggtggtgaacatttacgacgtgcggtgtttgaagaca
aagagccaaccagtgtcccagctccagggtcactctttaagcatatccagctgttacttc
tctccatgcactggcaacagagtggtcacttcttgtatggacaactacatcagagtatat
gacacatctaccatgatcaccgaagccccgctgctgacatccatcagccatgacatgagg
acgggccgctggctgtccaaactgtcggccgtgtgggaccccaaacaggaagactgcctg
ttggtagggagcatgttgaggccacgaaggatgcaggtgttccacgagagcggccgcctc
atgcacacgttcaccgacgacgagcaccttagcacggtgctgtccgtcactgccttccac
cccacccgaaacagcatcctgggcggcaacgcgtcgggacgcctgcacgtcttcgcagat
taa
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