Syngnathus scovelli (Gulf pipefish): 125967203
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Entry
125967203 CDS
T08785
Symbol
lrrc4cb
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125967203 (lrrc4cb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sscv04515
]
125967203 (lrrc4cb)
Cell adhesion molecules [BR:
sscv04515
]
Immunoglobulin superfamily
NGL family
125967203 (lrrc4cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
LRR_1
Ig_3
LRR_14
V-set
ig
LRR_9
Ig_2
LRRNT
Ig_6
Syndecan
Motif
Other DBs
NCBI-GeneID:
125967203
NCBI-ProteinID:
XP_049573969
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All DBs
Position
4:complement(11281186..11331550)
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AA seq
631 aa
AA seq
DB search
MLNKMISSFQRQTMRSRRLKGALSNPLFVLLLALQILVVAGLVRAQTCPSVCSCSNQFSK
VICTRRSLRDVPDGISTNTRYLNLQDNLIQVIKVDSFKHLRHLEILQLSKNHIRSIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISDGAFKDLSNLRYLNLGMCNLKEIPNILPLVRLEELEMSGNQLTIVKPSSF
TGLVNLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTFLPHDLFTPLHRMERVHLH
HNPWNCNCDILWLSWWLKESVPANTSCCARCHTPTLFKGRYIGELDHSYFQCDVPVIIEP
PSDLNVTEGMGAELKCRTSSLTSISWLTPNGSLVTHGAYKVRLSVLNDGTLNFTSVTMQD
TGTYTCMVSNTAGNISASAVLNVTSVENSGVTYFTTVTVETIESPGDDSHTPLPPFGWVS
SSTTKTTPVSTRTTERTYTIPVLDLDGEGALNGLDEVMKTTKIIIGCFVAITLMAAVLLV
IFYKMRKQHNQQDPDGPASSMEVITVEEELAGVAAIDRHLSLPPLEHYNHYNTYKSTYHH
PSMLSTIHSSTTQEHLLIQACSKDNVQETQI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacaaaatgatctcctccttccagcgccagacaatgagaagtcgtaggctaaag
ggggcgctatccaaccccctcttcgtgctactcttggcccttcagatcttggtggtggcc
gggctagttcgtgctcagacctgtccttctgtctgctcgtgtagtaaccagttcagcaaa
gtcatatgcacccgtcgcagtctacgggacgtgcctgatggtatttcgaccaacacccgt
tacttaaaccttcaggacaacctcatacaggttatcaaggtggacagtttcaaacacctg
cgccacttggagattctgcagctgagcaagaatcacattcgcagcattgaaatcggcgct
tttaatggactggcaagcctaaacaccctggagctctttgataaccggctcacgacaatc
cccaatggagcatttgagtatttgtccaagttaaaggaactgtggcttcggaacaaccct
atcgaaagtataccgtcctatgccttcaaccgagtcccctcgcttcgaaggttggacttg
ggcgagctcaaacgtctctcctacatttcagatggagccttcaaggacttgagcaatttg
cgctatttgaatttgggaatgtgcaacctgaaggagatccccaacatcttaccactggta
agactggaagaactggaaatgtctggaaatcagctgactattgtcaagcctagctccttc
acaggattagtcaacctccagaagctgtggatgatgcacgcccagatccaaaccattgag
aggaattcctttgacgacttgcagtcattggtagagctaaaccttgctcacaacaacctg
acttttcttccacatgacctcttcacacctctgcatcgtatggaacgggtccaccttcat
cacaacccttggaattgcaactgtgatatcttgtggctcagttggtggctcaaggaatcc
gtgcccgccaatacgagttgctgtgcccgttgccatacccctacgctctttaaaggtcgc
tacattggtgaattggatcatagctacttccagtgcgatgttcctgtcataatcgagcca
ccctctgacttaaatgtgacagagggcatgggtgcagagctcaaatgtcgtacaagctcc
ttgacatccatcagctggctcacaccaaatggctccctggtgacgcacggggcgtataag
gtgcgactgtcggtactcaacgatggcacgcttaacttcaccagcgtcaccatgcaagac
accgggacgtacacctgtatggtcagcaacactgcgggaaacatctccgcctcggctgtg
ctcaatgtcacttctgtggaaaacagcggggtgacctatttcacaacagtcaccgtggag
accattgagagcccgggtgacgatagccacacaccgctcccgccgttcggttgggtgtcc
tcctcgaccacaaaaacgaccccggtttcaacgaggaccacggagaggacttacaccatt
ccagttctcgatctggacggagagggagccctcaacggcttggatgaggtgatgaaaaca
accaagattatcattggctgctttgtggccatcacgctcatggctgctgttctacttgtt
attttctacaaaatgaggaagcagcataaccaacaggatcctgacggcccggcctcctct
atggaagtcattacagttgaagaagagcttgcgggtgttgctgcaattgacagacaccta
tcgctgcccccactggagcactacaaccactacaacacctacaagagcacttatcatcac
ccctcaatgctcagtaccatacacagctcaaccacacaggaacatttactgattcaagct
tgttcaaaagacaatgtacaagagacccaaatctga
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