Syngnathus scovelli (Gulf pipefish): 125967255 Help Entry 125967255         CDS       T08785                                  Symbol itga11a Name (RefSeq) integrin alpha-11a isoform X1   KO K06587   integrin alpha 11 Organism sscv  Syngnathus scovelli (Gulf pipefish) Pathway sscv04510   Focal adhesion sscv04512   ECM-receptor interaction sscv04810   Regulation of actin cytoskeleton sscv04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:sscv00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     125967255 (itga11a)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     125967255 (itga11a)   09142 Cell motility    04820 Cytoskeleton in muscle cells     125967255 (itga11a)    04810 Regulation of actin cytoskeleton     125967255 (itga11a)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:sscv04515]     125967255 (itga11a) Cell adhesion molecules [BR:sscv04515]  Integrins   Integrin alpha subunits    125967255 (itga11a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  VWA FG-GAP Integrin_A_Ig_2 VWA_2 Integrin_A_Ig_1 FG-GAP_3 Integrin_A_Ig_3 FG-GAP_2 LYRIC Ku_N ITGAX-like_Ig_3 Motif Other DBs NCBI-GeneID:  125967255 NCBI-ProteinID:  XP_049574136 LinkDB All DBs Position 4:9964539..10001690 Genome browser AA seq 1200 aa AA seqDB search MHACSGPHMEYYYLLLLWIFSQLLGCHYCFNIDTTKHRIIKGPKQAQFGYTVQQHVSSGG EKWLLVGAPYEMNGVYQTGDVYKCSLTKRTNGNGCTKLNLGRISLTNVSERKDKMRLGMT LMTNPKDNSFVACGPLWSYECGSSYYSTGICSRVNASFKFSRTIAPAFQRCETYMDIVIV LDGSNSIYPWTEVQAFLINVLQKFYIGPGQIQVGVVQYGEKVVHEFKLNDFKSVEEVVKR ARTIGQRGGEETNTALGINIARSEAFKQGGRRGAKKVMIVITDGESHDSADLQPAIEESE KDGITRYAIAVLGYYNRRGINPEAFLSEIKYIASDPDDKHFFNVTDESALKDIVDALGER IFSLEGTSKNGTAFGLQMSQAGFSAHNVEDGTLVGAVGAYDWNGAVLKETRQGKVVPPKA SYTQEFPEELKNHGAYLGYTVTSVVSAKSGRLLVAGAPRFNHTGKVIIFTLKTPANLTIL HSLKGQQIGSYYGSEIAPVDIDGDGVTDNLLVAAPMFFSGGMEKGKVYIYRVTELNRFVF EGALEIHNGGQNARFGSSLAPVPDLNGDGFNDLVVGAPLEDEHKGAIYVFFSQQNRILRK YKQRIAAVDLAPGLQYFGRSIHGMMDMNNDGLVDLAVGSLGAAVLLWSKSVVRIYTTVRF EPSKINIFVKDCQRGGKDVTCMSAIVCFNITSRTAISATEEIGLKYNVSIAERRFNPRAI LDNPSKSQPQNLTLLPGDEACEHIYFHVMETTDYARPIVFAVQVGLRDPLNGPVLDESWP TETRTELPFWNGCDEDDRCMPDLALHSVTDLMTQKQFCSQAVQSRGAFCRHLNEGGSEGS LRVLEANRRRLVVDVRLENKGENAYNARLNISYSHNLRFSSLILKDNADIKIDCYIEDKV KHEKICNVSAPFMKSKAQVLFRLEFEFSRIVILDHLRVILEASSNGEEMSTADNFNDIYY SLKYEADLLFTRDSNPTRYEIKSELSLEEPGVIGPPFNFTFQIQNLGYFAVKDLQLNIEV PEMTKNGNQLLQISDLHIDQRDGTHCVPPQHVAQSRASPEDLTRFSRLNRSNTLILPIQC TINVASYREISVRITGALRVHTLHALKFKILELVTSASAELPSTSRMFLHEERPVREIIL EVRKEGDYRIPTWIILGSTLGGLLLLALLCLALWKLGFFQRQKRRDEDEREMNGKVAEER NT seq 3603 nt NT seq  +upstreamnt  +downstreamnt atgcatgcatgctccggcccacatatggagtactactacttacttctgctatggatcttc agccagctgttaggatgccattactgctttaatattgacacaacaaaacacaggatcatc aaaggtccaaagcaagcacagtttggatacactgttcagcaacacgtgtcgtctggggga gaaaaatggttattagttggagcaccatatgaaatgaacggtgtttaccagacaggggat gtatataaatgttcactgaccaaacgaaccaatggaaatggttgcaccaagcttaacctc ggaaggatatctctgaccaatgtatctgagcggaaagacaagatgaggttgggaatgacg cttatgaccaatcccaaagacaacagttttgtggcctgtggaccactttggtcatatgag tgtggcagctcttactatagcactggtatctgctccagagtcaatgccagtttcaagttc tcccgaacgattgcaccggcctttcagagatgtgagacctatatggacatagttattgtt ctggatggctccaactccatctacccttggactgaagtgcaggcttttctcatcaacgtt cttcagaagttctatatcggaccaggtcaaattcaggttggagttgttcagtatggtgaa aaagttgtgcacgagttcaaactcaatgattttaaatctgtcgaggaagtggtaaagaga gcacgtactatcggccagcggggcggagaagagactaacacggctctcggcatcaacatt gcacgatctgaagctttcaaacaaggaggtcgacgtggggccaagaaagtgatgatagtg ataactgacggagagtctcatgatagtgctgacctccagccagccattgaggagagtgaa aaagatggcatcacccgttacgccattgctgttctcggttactacaaccgaagagggatt aatcctgaggcattcctcagtgagatcaaatacattgccagtgacccagacgacaaacac tttttcaatgtgacggatgaatcggcactgaaggacattgtggatgcacttggtgaacgc atcttcagtttagaaggaaccagtaaaaatggaacagcgtttggtctccagatgtctcaa gctggattctccgctcacaatgttgaggatggaactctggtgggagctgtcggggcttat gattggaacggggcagtgctaaaagagacacggcaagggaaggtggtccctccaaaagct tcctacacgcaggagtttccagaagagctcaaaaaccatggtgcctacttaggatataca gtgacatcagtggtatcagccaaaagtgggcgtctactcgttgctggagcaccacgcttt aaccatactggcaaagtgatcattttcactttgaagacccctgctaacctgaccatcctc cattccctcaaaggccagcagattggttcctattacggcagtgagattgcaccagtggat attgatggagacggtgtcactgataaccttttggtggcggcacctatgttcttcagtggc ggcatggagaagggaaaagtatacatctatagagtgacagagctgaatcgtttcgttttt gaaggtgcattggagatccataacggtggccagaatgctcgctttggctcgtcccttgca cccgtaccagatttaaacggggatggtttcaatgacctggtggtcggggccccgttagaa gacgagcacaaaggggcaatctatgttttcttcagtcagcagaacagaatactgcgcaaa tacaaacagaggattgcggcagtagatttggcacctggcctgcaatacttcggccgcagc atccatggaatgatggacatgaacaacgatggtttagtggacctggcagtgggatcactt ggtgcagctgttctcctctggtcaaagagcgttgtccgcatttatactactgtcaggttt gaacccagtaagatcaacatctttgtgaaagactgtcagaggggtggcaaagacgtgacc tgcatgtcagccattgtttgcttcaacatcacctccagaacagccatttctgccacggag gaaattgggcttaaatataacgtgtccattgcggagcgacgtttcaatcctcgagccatc ctggacaacccaagcaagtctcagcctcaaaacctgacccttcttcctggagatgaagcg tgtgagcacatttacttccacgtcatggagacaaccgactatgcgaggcctatcgtgttt gccgtacaagtcgggctgcgggatccactcaatggaccagttctagatgaaagctggcca acggagacaagaactgagttgcctttctggaacggatgtgatgaggatgaccggtgtatg ccagacctagccctgcatagtgtgacagacctgatgactcaaaagcagttctgttcacag gctgttcagtcccgaggtgctttctgccgccatctaaatgaagggggttcagagggatct ctacgggttctcgaggcaaacaggagaaggctggtagtggatgtccggctggaaaacaaa ggagagaatgcctacaatgctcgtctcaatatcagctattcccacaatctgcgtttctca agcctcattttgaaggacaatgctgatatcaagattgattgttacatcgaggacaaagtg aaacacgagaagatctgcaatgtcagtgctccatttatgaagtcaaaagcacaggtatta tttcgtttggagtttgagttcagtcgcattgtcatccttgatcatctcagagtcatcctg gaggcaagcagcaatggcgaggaaatgagtacagctgataacttcaatgatatctattac tcactgaaatacgaggcagatcttctcttcacaagggattcaaatccaactcgttatgag atcaaatctgaattatcactggaggagcctggagttattggtcctccttttaacttcact tttcagatccagaatcttggctactttgctgtgaaagatctacagctgaacattgaggtc ccagaaatgacaaaaaatggcaaccagctcctgcagatatcggatttgcacattgaccag agagatggtacacactgtgtaccaccccagcatgtggcacagagcagggcgtcacctgag gacctcacccgtttctctcgcttgaatcgatccaacaccctgattctgccaatacagtgc acaatcaatgtcgcctcctacagagaaatctcagttagaattacaggagctctacgagta catactttacatgcactgaagtttaaaatccttgaactggtcaccagtgcatcagcggag ctgccctccaccagccgcatgtttctacatgaagagagacctgtcagagaaataatattg gaagtgagaaaagagggagattacagaatcccaacctggataatcctaggcagcacgctg ggaggactcttactgttagccctgctttgtttggctctctggaagttgggcttcttccag aggcagaaacggagagatgaggacgagcgggaaatgaatggaaaagtggctgaagaacga taa

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