Syngnathus scovelli (Gulf pipefish): 125967257
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Entry
125967257 CDS
T08785
Symbol
bbs4
Name
(RefSeq) Bardet-Biedl syndrome 4 protein isoform X2
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125967257 (bbs4)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sscv03037
]
125967257 (bbs4)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
125967257 (bbs4)
Cilium and associated proteins [BR:
sscv03037
]
Primary cilia and associated proteins
BBSome
125967257 (bbs4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_11
TPR_19
TPR_14
TPR_12
ANAPC3
TPR_17
TPR_CcmH_CycH
TPR_16
TPR_6
TPR_9
ARM_TT21_2nd
TPR_7
TPR_15
TPR_Slam
ARM_TT21_4th
NatA_aux_su
PknG_TPR
ARM_TT21_N
ARM_TT21_C
Wzy_C_2
ChAPs
HAT_Syf1_CNRKL1_C
HrpB1_HrpK
Motif
Other DBs
NCBI-GeneID:
125967257
NCBI-ProteinID:
XP_049574142
LinkDB
All DBs
Position
4:10335483..10345340
Genome browser
AA seq
468 aa
AA seq
DB search
MCEYAIYVQALILRLEGKIQQSLELFQSCAILNPGSADNLKQVARSLFLLGKHKAAIEFY
HEAARLNERDWEISHNLGVCYLFIKDFVHAKEQLNMALQLNKHDATFMMLGKVHLLAGET
DNAIDVYKRAVEFSPENTELLTTLGLLFLSLGKYQKAFEHLGNALTFDPNNYKAILAAGS
MMQTHGDFDVAMNKYRVAACAVPESPPLWNNIGMCFFGKKKYVAAISCLKRAHYLSPFDW
KVLYNLGLVHLTMQQYASAFHFLSAAINLSPRLGELYMLLAVALTNLDDVENATRAYEQA
VNLDQANPLVNLNFSIFLYNHGDKKGALNQYQEMERKVNMQRDSSSSFDFDPELIDMAQK
MGAALQVPESIVWTKPSKGSKSKLSSGAATPSPGAPLGTNQALGQAMSSAASYSKNIQPP
TKPSTSLEPDPDVDSVPSPPSDPPGSPEPAQSEDPRPKTSKRKSKVEE
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgaatatgccatatatgtgcaagcactaatcttgcgcctggagggcaagattcaa
caatccctggagctgtttcagagctgtgccatccttaatcccggcagcgctgacaatctg
aagcaagtagccagatcactgtttttactgggaaagcacaaagcagcgattgaattctac
catgaagctgcaagactcaacgagagagactgggagatcagtcacaatctgggagtgtgc
tatctcttcatcaaagacttcgtacatgccaaggagcaactcaacatggctctccagtta
aacaaacacgacgcaactttcatgatgcttggcaaagtccacttgctggccggagaaact
gacaacgccattgatgtgtacaagagggcagtggaattctctccggagaacacggaactg
ctgacaactctcggtctgctctttctctcacttggtaaataccaaaaagcttttgagcac
cttggaaatgccctcacatttgaccccaacaattataaggccatcctggccgcaggcagc
atgatgcagacccacggcgactttgatgttgccatgaacaagtaccgggtggcagcatgt
gctgtgcctgaaagcccccctctctggaacaacatcggcatgtgcttctttggcaaaaag
aaatacgttgccgccatcagttgcctgaagcgagctcactacttgtctccttttgactgg
aaagtgttgtacaacctggggctggtacacctgaccatgcagcagtatgcgtctgctttc
cacttcctcagtgccgctatcaacctcagcccacgattgggcgagctctacatgcttctg
gcagtggctttgaccaacttggatgacgtggagaatgccaccagagcgtacgagcaagct
gtgaatctggaccaagcaaaccctctggtcaacctgaacttttcaatcttcctctacaac
cacggcgacaaaaagggagcgctgaatcagtatcaggaaatggagagaaaagtcaacatg
cagagagacagcagcagcagctttgactttgacccagagctcatagacatggctcagaag
atgggagcagccctgcaggtgcctgagagcatagtgtggactaaaccatccaagggctcc
aagtccaaactgagctcgggagcagctactccaagcccaggtgctccccttggcactaac
caagccctgggtcaggccatgtcttctgctgccagctatagcaagaatatccagccacca
acaaagccctccacgtcacttgagcctgacccagacgtggacagtgttcccagcccgcct
tctgatcctccaggttccccagaaccagcccaatcagaggacccccgacccaaaacctcc
aagagaaaatcaaaggtggaggaatga
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