Syngnathus scovelli (Gulf pipefish): 125967318
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Entry
125967318 CDS
T08785
Symbol
gpc6a
Name
(RefSeq) glypican-6a isoform X1
KO
K08112
glypican 6
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sscv00535
]
125967318 (gpc6a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sscv00537
]
125967318 (gpc6a)
Proteoglycans [BR:
sscv00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
125967318 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sscv00537
]
Others
125967318 (gpc6a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glypican
Fz
Serglycin
Motif
Other DBs
NCBI-GeneID:
125967318
NCBI-ProteinID:
XP_049574266
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Position
4:complement(22778397..22826116)
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AA seq
566 aa
AA seq
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MWRLQVVVCTLWVLLSTSFCAESKARSCGEVRQAYHAKGFSLVGVPHQEISGEHLHICPQ
GYTCCTSDMEDKLNQQSKLDFEKLVEESSRDMRVTFVASHKKFDEFFLELLDNSERSLSS
MFSRTFGKLYVRNSEVFQDLFIELKRYYTGGNVNLEEMLNDFWTRLLERMFQLFNSQYHF
TDDYLECVSKYSDQLKPFGDVPRKLKAQVTRALIAARTFVQGLMVGREVANRVAKVNVAA
ACVRALTKMLYCPYCRSMPGLKPCQNYCQNVMRGCLANQADLDLEWNTFTDAMLLVAERL
QGPFHIDAVIEPIDLKISEAIMIMQDNNKILSAKFFQSCGPPKLSSIGRSARGISDVFSA
RFRPHPPEEKPTRVTETSLDRLRAVWMTMQHSVIDIKEKLKVSKRFWSNLPDDICADGKL
TESDEEQCWNSHTKARYFPEVVKEGLTNQVNNPEVNLDITRPDTLIRQQIMALRVMTNKL
KNAYNGNDIYFQDSSDEGSSSGSGSGCTEGCTTEAVLVGSEAPVMVADRSDVHTAAAGKT
LSHGPSQLLLLTTLIASFGTMQPGWR
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtggagactgcaagtggttgtgtgcaccctgtgggtgctgctgtccacgtctttctgt
gctgagagcaaagctcgaagctgcggcgaagttagacaagcgtatcatgccaaaggattc
agtcttgtcggtgtacctcatcaggaaatatcaggtgagcacctgcacatctgtccacag
ggatacacctgctgcacatccgacatggaagacaaactcaaccagcagagcaagttggac
tttgagaagttggtggaggagagcagccgtgacatgcgggtgacgtttgtcgccagtcat
aaaaagtttgatgagtttttcttggaactcctggataattccgagaggtctctgagcagc
atgttctcaaggacatttgggaagctatacgtgaggaactcggaggtgttccaggacctg
ttcatcgagctgaagcgctactacacggggggcaatgtcaacttggaggagatgctgaat
gatttctggaccaggctgctggagcggatgttccagcttttcaactcccagtaccacttc
acagacgattacctggagtgtgtcagtaaatactcggatcaactcaagccttttggagat
gtgcccaggaaactcaaagcgcaggtcaccagggctttgattgcagcgcggacctttgtc
cagggcctgatggtcggtcgggaagttgccaaccgggttgccaaggtgaacgttgccgcc
gcttgcgtcagggccttgaccaagatgttatactgcccgtactgtcgaagcatgcccggg
ctgaagccttgccagaactactgtcagaacgtcatgagaggctgtctcgcaaaccaggct
gacctggatctggaatggaacactttcacggatgccatgttgttggtggcagagagactg
caaggaccttttcacattgatgcagtcattgagcccattgacctcaagatttccgaggcc
atcatgatcatgcaggacaacaacaagatcctgtcagcaaagttttttcagagttgtggt
ccacccaaactttcaagcataggcaggtctgcacgtggaatttccgacgtgttcagtgct
cggttcagacctcacccgcccgaggaaaagccgaccagagttacggagacgagcctggat
cgactgcgggctgtctggatgacaatgcaacacagcgtgattgacatcaaagagaaactg
aaggtgtccaaaaggttctggtccaatctaccggacgatatctgcgccgacggcaaattg
accgagtctgacgaggagcagtgctggaacagccacaccaaagccagatatttcccagag
gtggtgaaggaaggactaaccaaccaagtgaacaatccagaggtcaacctggacatcacc
agacccgacacattaattcgtcaacaaataatggcgctgcgggtgatgaccaacaagctg
aaaaatgcatacaatggaaatgatatctacttccaagactccagcgacgaaggcagcagt
tcgggcagcggcagcggctgcaccgaaggctgcacgacggaggccgtcctggtcggatcc
gaagctccggtgatggtagcggacagaagcgacgtccacacggcggcggcgggcaagacg
ctctcccacggaccctcgcaactgttactgctaaccaccctcatagcgtcgttcggcaca
atgcagcccggatggagataa
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