Syngnathus scovelli (Gulf pipefish): 125967365
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Entry
125967365 CDS
T08785
Symbol
neo1a
Name
(RefSeq) neogenin 1a isoform X1
KO
K06766
neogenin
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04350
TGF-beta signaling pathway
sscv04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
125967365 (neo1a)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125967365 (neo1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sscv04515
]
125967365 (neo1a)
Cell adhesion molecules [BR:
sscv04515
]
Immunoglobulin superfamily
DCC/UNC5 family
125967365 (neo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
ig
Ig_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
NDNF
Tissue_fac
fn3_2
C2-set_2
SusE
DUF4834
EphA2_TM
TMEM154
CD34_antigen
LapA_dom
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
125967365
NCBI-ProteinID:
XP_049574332
LinkDB
All DBs
Position
4:10383197..10500985
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AA seq
1505 aa
AA seq
DB search
MAERGALLLLSLHFCLTFLCTGSTAAKHVDKASAAQPFNPFRFTVEPRDTVAIRGNSAQL
NCSVHSDAAVPARIEWKKDGTFMSLVSDERRRILPDGSLLFTHVVHSKHNKPDEGTYQCV
ATIENLGSISSGTAHLYVAGMPRFGSQPAPTSVRQGDSQVMACEVNSDLVTFTRWEKDRQ
PLELNLRLVQLPTGALVISNATENDSGLYRCLVENVGSSKSSEEAQLQILPETGDERKPE
FLVQPVPVTKVLGASVLLACVAAGFPTPHVRWMFKDKPLEESEGRRELLGGGSLQISNLT
EEDAGIYTCVADNTNATIEAPAQLTVQVPPQFAKRPANIYAHESMDIVFECEVTGSPAPT
VKWVKNGDAVIPSDYFKIIKEHNLQVLGLVKSDEGFYQCLAENDAGNIQSSAQLIILDHD
VALPPLPPPSLTPNTTDHVTPGSGGVAGPAGPTPTAPRDVVASLVSTRFIKLTWRPPAEP
HGDELTYSVFYSQEGTSRERVVNTSRPGELQVTIQNLMPDTKYRFRVLAHNINGQGESST
ALKVATQAEVQVPGPAPNLQAASNSPTSVTLSWDKPVTGNGEILTYKLYYTDKSIGNEQD
VDVDGLSFTMTGLKKNTQYSFRVVANNKHGPGVSTDDIIVRTLSDVPSAPPQNFTLEVQN
SKSIMLRWQPPPSNSQNGEITGYKIRYRKGSRRSETAETTGGTQLSKLIDGLERGTEYSF
RVSAITVNGTGPATDWTTAETFESDLDESRVPDQPSSLHVRPLVSSIVVSWTPPENQDIV
VRGYSIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPVYESAIT
RPQSDPIDPDVDLYELFHAPYTPVPDPTPMMPPVGVQASVLSHDTIKVTWADNSLPKNQK
ITDNRYYTVRWKTNIPANTKMKVANTTSLNHMVSGLKPNTLYEFSVMVTKGRRTSTWSMT
AQGTTFETIPSSSPKDVTVVSKENKPRTIIINWQPPSEANGKITGYIIYYSTDVNAEDHD
WVVEPVLGNRLTHQIQDLTLDTTYYFKIEARNSKGMGPTSEAVHFRTPKTESSDKMANDQ
ASNLPSKPGPPGNQLPLDPGSAVGKSGMGSNENHILVIVIIISVGAFIIILVVVGAFLCT
RRTTSHQKKKRAASKSSNGSHKYKSNSKDLKPPDLWIHHERLELKPMDKSPEPNPVMTET
PIPRTSQDITPADSGMDSNPHLQQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDAQPP
QPVISAHPIHSLDNHQHHYHMGSLASPTRSYLYHQGSGHPRVHSCSPVSHLDTESVRNTP
CSEPLPPAASSSQASCPSEILAEPEGSYHGSSTTEEECCYTGNLPPLRSAHPHAHAHPLK
SFAVPAIPASGHPSFESPALPSTPLLAQTGPPTHPHVVKTACIGTLGRTRTPMIVNVPNA
PDVPETSKMLEDVDSVLASLPPCPSPAPRSNPVPLPQSYEPDELTEEMAHLEGLMKDLNA
ITTAP
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcggggagctctgttgctcctctctctccacttctgtcttacctttctgtgc
acggggagcacggcggccaagcatgttgacaaagcatcagcagcacagcctttcaaccca
ttccggttcacggtggagccccgagacacagtggctattcggggtaactctgcacagctc
aactgttccgtacacagtgatgcagccgtaccagcacgcatagagtggaagaaagatggc
accttcatgagcctggtttcggatgagagacggcgcatactccctgacggctccctcctc
ttcacccatgtggttcactcaaagcacaacaaacctgatgagggcacttaccaatgtgtg
gccaccattgaaaacctaggatccatttctagtggcacagcgcacctctatgttgcagga
atgcccaggttcggcagccagccagcacctacatctgtgcgtcaaggtgacagccaagtc
atggcctgtgaagtcaattcagacctggtgaccttcacccgctgggagaaagaccgtcag
cccctggagctcaacttgagactggtccaactacctactggtgccttggtgatcagcaac
gccacagaaaatgattctggtctttaccgttgcttggtggagaatgtggggtcatcaaag
tccagtgaagaggcgcagctccaaatcctgccagaaactggagacgagaggaagccggag
ttccttgtacagcctgtgcctgtgaccaaggtgctgggtgccagtgtcctgctggcctgc
gtggctgcaggttttccaacaccacatgtgcgatggatgtttaaagataaaccgctagag
gaaagcgagggccgcagggaattgcttggaggtggcagtcttcagatttccaatctcaca
gaggaggacgctggcatttacacctgtgtggctgacaacaccaatgcaacaattgaagcc
ccggctcaactcactgttcaagttcctccccagtttgcaaagaggccggccaacatttac
gcccatgagtccatggacatcgtgtttgagtgcgaagtcacaggttcaccagcccccact
gtaaagtgggtcaagaatggcgacgctgttattccaagcgactacttcaaaattattaag
gaacacaatctacaggtgctgggcctggtcaaatccgatgagggtttctaccaatgtctt
gcagaaaatgatgccggaaacattcaatccagcgctcaactcatcatcttggatcacgat
gtagcccttccccctctccctcccccctcactgactcctaacactactgaccatgtaacg
ccaggctctgggggtgtagctggtccagcaggacccactcccaccgccccccgcgatgtt
gtggcttcgctggtttccacccgcttcatcaagcttacctggcgcccgccggctgaaccg
cacggagacgagctaacctactctgttttctacagccaagagggcacaagcagggagcga
gttgtaaatacaagccgaccaggggagttgcaggtcaccatccagaatctgatgccagac
accaaatatcgctttagggttttggcccacaacatcaacggccaaggagaaagctctacc
gctctaaaggtggccacccaggctgaagttcaagttcccggcccagctccgaatcttcag
gcggcatcgaattcaccgacctctgtcactctaagttgggacaaacctgtcaccggcaat
ggagagatcctcacctacaagttgtactacacagacaaaagcataggaaatgaacaggat
gttgatgtcgatggtctgtcattcaccatgaccggtctgaagaagaacacgcagtacagt
ttccgtgttgttgccaacaataagcacggtccaggtgtctccactgacgatattatagtc
cgcacattgtctgacgtgccaagtgcgcctcctcaaaattttactcttgaagtgcaaaac
tcaaagagcatcatgcttcggtggcagccgccgccctcaaattcccagaatggcgaaatc
accggatacaagatccgataccgtaaaggatcacggagaagtgagacagcggagaccacc
ggagggacccagctgtccaagctcattgatggtcttgagcgtgggacagagtattccttc
cgagtgtctgccatcacagtgaatggcacgggcccagccaccgactggactactgcagag
acatttgagagtgatttggatgaatcacgggtcccagaccagcccagttcgcttcacgtc
cgtccactggtcagcagcatcgtggtgagctggacgccgccagaaaaccaggacattgtt
gtacgtggctacagcattggttacggcattggcagccctcatgctcagaccatcaaagta
gattacaagcagcgctactacaccattgaaaatctcgaccccagctcccactatgtgatc
acactcaaggccttcaacaacgtgggtgaggggattcctgtatatgagagcgccatcaca
aggccacagtcagaccccatagaccctgatgttgacctgtacgaactcttccatgctcca
tacaccccagttccagatcccacccccatgatgccacctgtgggtgttcaggcctccgtt
ttgagccatgacaccattaaagtcacctgggcggacaactcgctgccgaagaaccaaaag
atcacagataaccgctactacacagtgcgctggaagaccaacatccctgccaacaccaaa
atgaaggttgccaacaccaccagcctaaaccacatggtgtcaggactgaagcccaacacc
ttatacgagttctccgttatggtgaccaaaggtcgacgcacgagcacatggagcatgaca
gcccagggaaccacctttgaaaccattcctagctcgtcccccaaagatgtgacagtggtg
agcaaagagaacaagcctcgcaccatcatcatcaactggcagcctccctctgaggccaat
gggaagatcacaggttacatcatctactacagcacagatgtcaatgcggaggaccacgac
tgggtcgttgaacccgtgttgggcaaccgcctgactcaccagatccaggaccttactcta
gacaccacatactatttcaagattgaggctcgaaactcaaagggcatgggccccacgtct
gaggctgtacactttaggaccccaaagactgagtcctctgacaaaatggctaatgaccaa
gcctcaaatcttccatcgaagcctgggcctccaggcaatcaacttccccttgatcctgga
tcagcagttggcaaatccggtatgggaagcaatgaaaatcacatcctggtcatcgtcatc
atcatctcagtgggagcgttcatcatcatcctggtagttgtgggggccttcctgtgcaca
cggcgcaccacgtcacaccagaaaaagaagcgggcggcctccaagtcatccaatggctcg
cacaaatacaagagcaactccaaagatttgaaaccgcctgatctttggatccaccatgag
cggctggagctcaaaccaatggacaagtcaccggagccaaacccagtcatgaccgaaaca
cccatcccgcgcacctcccaagacataactccagcagacagcggcatggacagcaacccc
catctgcagcagaggcgaaattcctaccgtggccatgaatcagaggacagcatgtcgacc
cttgcaggccggcgggggatgaggcctaaaatgatgatgccttttgatgcacagccacct
cagcctgtaattagcgctcatcccatccattccctcgataaccatcagcaccattatcac
atgggcagcctggcgtcgcccacgcgcagctacctctaccatcagggcagcgggcacccc
cgtgtgcattcctgcagccctgtctcccatttagacacagagtcggtgaggaatacacct
tgttcggagcctcttcctccagctgcctcatcctcgcaggcctcctgcccctcagagata
ctggcagagcccgagggcagctaccacggctccagcaccacggaggaagagtgctgctac
accggcaacctgccgcccctgcgctcggcccacccgcacgcccacgctcaccctctgaag
agctttgctgtgcctgccatcccagcttcgggtcaccctagcttcgagtccccggcgctg
cccagcactcccctgctcgctcagactgggcctcccacacacccccatgtcgttaaaaca
gcctgcatcggtactcttggaaggactcgaacgccaatgatagtcaacgtgcccaacgcc
cccgacgtcccagagactagcaagatgctggaggatgtagacagcgtgcttgcctcccta
cccccctgcccctcccccgcccctcgcagtaaccctgttcctctccctcagagttacgaa
ccagatgagctgaccgaggagatggcccacttggagggcctcatgaaggacctcaatgcc
atcaccacagcaccatga
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integrated database retrieval system
