Syngnathus scovelli (Gulf pipefish): 125967382
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Entry
125967382 CDS
T08785
Symbol
pax6b
Name
(RefSeq) paired box protein Pax-6b isoform X1
KO
K08031
paired box protein 6
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125967382 (pax6b)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
125967382 (pax6b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_32
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
125967382
NCBI-ProteinID:
XP_049574380
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Position
4:15952284..15972321
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AA seq
457 aa
AA seq
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MPQKEYHNQATWESGVASMMQNKVYDICDEGHSGVNQLGGVFVNGRPLPDSTRQKIVELA
HSGARPCDISRILQTHDEVQVVDSEKVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATP
EVVAKIAQYKRECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEKQQMGADG
MYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPNQDGCQPQDGVGENTNSISSNGEDSEETQ
MRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR
RAKWRREEKLRNQRRQASNSSSHIPISSSFSTSVYQAIPQPTTPVSFTSGSMLGRADSAL
TNTYSALPPMPSFTMANNLPMQPSQTSSYSCMLPTSPPVNGRSYETYTPPHMQAHMNSQS
MTASGTTSTGLISPGVSVPVQVPGSEPDMSQYWSRLQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgccccaaaaagagtaccacaatcaagccacgtgggagtctggcgtagcctcaatgatg
cagaacaaggtgtatgacatctgtgatgaaggtcacagcggcgtcaaccagctcggcggt
gtgttcgtaaacggtagaccgctaccggactccaccaggcagaaaattgtagaactcgcc
cacagcggtgctcgaccctgcgacatctcccgaatactacagacccatgatgaagtccaa
gtggtggacagtgaaaaggtgtccaacggctgcgtgagcaaaattctgggccgctactat
gagaccggctccataagaccgcgggccatcggcgggagcaagccccgggtcgccacgcca
gaagtggttgccaagatcgcgcagtacaagcgagagtgtccgtcaatcttcgcctgggag
atccgcgaccgtcttttatcggagggcatctgcaccaacgacaacatacccagtgtgtca
tcgataaaccgagtccttcgcaacctggcgagtgagaagcaacagatgggcgcagatggc
atgtatgacaagctgaggatgctcaacggtcagacaggaagttgggggacccggcccggc
tggtaccccggaacatcggtgccgggccagcccaatcaagatggctgccagccgcaagac
ggtgtcggagaaaacacaaattccatcagctcaaacggcgaggactcggaggagactcag
atgcgcctgcagctcaagaggaagctgcagagaaaccgcacctccttcacgcaggagcag
atcgaggcgctggagaaagaatttgagagaactcattacccagacgtatttgcacgagag
agactagcggccaaaattgacctcccagaagcaagaatacaagtgtggttctccaacagg
agagcaaagtggaggcgggaggagaagcttcgcaaccagcgtcgacaggccagcaactct
tccagtcacattcccatcagtagcagcttcagcactagcgtgtaccaggccatcccgcag
cccaccacacctgtgtcgttcacctcggggtccatgttgggccgagccgactcagccctc
accaacacctacagcgcactgcccccaatgcccagcttcaccatggccaacaatctacct
atgcaacccagccagacctcctcctattcctgcatgctgcctaccagtccgcctgtgaac
gggcgcagctacgaaacatacacgcccccgcatatgcaggcacatatgaacagccaatca
atgaccgcttctggtaccacctcaacaggactcatctctcctggagtgtctgtcccagtg
caagtccccgggagcgagcctgacatgtctcagtactggtctagactacagtag
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