Syngnathus scovelli (Gulf pipefish): 125967408
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Entry
125967408 CDS
T08785
Symbol
chrna5
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-5 isoform X1
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125967408 (chrna5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125967408 (chrna5)
Ion channels [BR:
sscv04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
125967408 (chrna5)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
125967408
NCBI-ProteinID:
XP_049574439
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Position
4:complement(18782877..18788819)
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AA seq
476 aa
AA seq
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MLRAEGAAASSLALLLLLLPLLHCCHLCHSLRVPKLSSYAKAEDKLFKYLFGNYQKWVRP
VEYLNQTIYVKFGLAISQLVDVDEKNQLMTTNVWMKQEWTDMKLRWDPDDYQGITTIRVP
SDRLWLPDVVLYDNSDGRFEGTVTKAVVKYDGTILWTPPANYKSACTIDVTFFPFDLQNC
SMKFGSWTYDGSQVDIILEDFHVDRQDYFDNGEWEIVTATGSRGLRVDAGVSYPTITYFF
IIRRLPLFYTLFLIIPCIGLSFLTILVFYLPSNCGEKISLCTSVLVSLTVFLLVIEEIIP
SSSKAIPLIGEYLVFTMIFVTLSIVITVFAINVHHRSSSTHHGMAPWVRRVFLHRLPKLL
CMRSHVDRYGTAGAAPTGRVPGLGMMKDYPAEHGLSHTRLNIQAALDSIRYITMHVVKEN
EVREVVQDWKFVAQVLDRIFLWAFLLVSVLGSALLFIPVIYKWASIIVPKHIGGVL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgctaagagcggagggggcggccgcctcctctctcgcattgctgctgctgctgttgccg
ctgctgcactgttgccacctgtgccactcgctgcgtgttcctaagctttcctcctatgca
aaagctgaagacaagctcttcaagtacctctttgggaactaccagaaatgggtccgcccg
gtggaatatctaaaccagaccatttacgtcaagtttggactggccatctcccagctcgtc
gatgtggatgagaagaaccaactgatgaccaccaacgtgtggatgaaacaggagtggact
gacatgaagctaagatgggaccccgatgactatcagggcatcaccactatacgagtgccc
tctgacaggctctggctcccagacgtcgtgctttatgataattcagacggtcgtttcgag
ggcacagtcaccaaggcggtagtcaaatacgacgggaccatattgtggacgccgcctgcc
aactacaaatctgcctgcaccatcgacgtcaccttcttcccatttgacctgcagaactgc
tccatgaaatttggctcgtggacttacgatggctcccaggtcgacatcattctggaggac
ttccacgtagacaggcaggactattttgacaacggcgagtgggaaattgtgacggccaca
ggcagccgcggtctaagagtggacgccggcgtctcctatcccaccatcacgtacttcttc
atcatccgccggctgccactcttctacacgctcttcctcatcattccctgcatcggccta
tcgttcctcacaatcctcgtcttctacctgccgtccaattgcggcgaaaagatctccctc
tgcacctcggtgctggtgtctctcaccgtcttccttctggtcatcgaggagatcatcccc
tcctcgtccaaggccatccctctcatcggcgagtatctggtcttcaccatgatcttcgtc
acgctctccatcgttatcaccgtcttcgccattaacgtgcaccatcgctcatcatccacg
catcacggcatggcgccgtgggtgcgcagggtcttcctgcatcggctccccaagctgctg
tgcatgcgcagccacgtggaccgctacggcacggcgggagcggcaccgacgggacgggtg
ccgggattggggatgatgaaggactatcccgctgagcacggcctctcccacaccagactc
aacatccaagctgcgttggattccatccgctacataaccatgcatgtggtcaaagaaaat
gaggtcagagaggtggtacaggactggaagtttgttgcccaggttctggatcgaatcttt
ctctgggcgttcctgctggtgtccgtcctaggttcagctctcctcttcatcccggttatc
tacaaatgggccagcattatcgttcccaaacatattggaggtgtcctctga
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