Syngnathus scovelli (Gulf pipefish): 125967415
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Entry
125967415 CDS
T08785
Symbol
chrnb4
Name
(RefSeq) LOW QUALITY PROTEIN: neuronal acetylcholine receptor subunit beta-4
KO
K04815
nicotinic acetylcholine receptor beta-4
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04080
Neuroactive ligand-receptor interaction
sscv04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125967415 (chrnb4)
04082 Neuroactive ligand signaling
125967415 (chrnb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125967415 (chrnb4)
Ion channels [BR:
sscv04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
125967415 (chrnb4)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF2417
Motif
Other DBs
NCBI-GeneID:
125967415
NCBI-ProteinID:
XP_049574449
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Position
4:18771984..18777245
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AA seq
570 aa
AA seq
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MERLVTLFGPTVLSTDKRSMLLDPYGVRRWRLVRPEERRSETSQAHWSRXLHGTVKMTTN
LVIVACIFTLIHGCGGADSEERLINWLLGEHRYNPLIRPAVNRTERVTVKLQVSLAQLIS
VNEREQIMTTNVWLTQHWVDYRLSWDPAKYEGIDKLRIPSRHVWLPDIVLYNNADGTYEV
TVFTNVIVLSNGSINWLPPAIYKSACKIEVKHFPFDQQNCTLKFRSWTYDHTEIDLMLKT
EVASMDDFTPSGEWDILALPGRRTVNPLDATYVDVTYDFIIKRKPLFYTINLIIPCVLIT
SLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLIGKYLMFTMVLVT
FSIITSVCVLNVHHRSPSTHTMPPWVKLIFLVKLPSLLFMRRPHNNAALHRLRKQRSRRT
VLGLGCPVTSQTGFPKTTSALLPSDSAFSTLGHKSAPTLGLSHPNRGELWSTDCIPGSLD
LHLRTNSNLATDVQEAVNGVRFVADHMMAEDDDQSVVEDWKYVAMVVDRMFLWIFVIVCV
VGTLGLFLQPLFQSQVSHQHQQPTSEMPRI
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggagcgtcttgtgacactttttgggccgacggttttgtctacagacaagcgctccatg
ctgctggatccttatggggtgcgccgctggcggcttgtccggccagaggagcgacgctct
gagacttcgcaagctcactggtcccgatgactacatggtaccgttaaaatgacgactaat
ctcgttattgtcgcgtgtatcttcactttaatacacgggtgtggcggtgccgactcagag
gagcgcctcattaactggctgctaggcgagcaccgctacaatccgctcatccgccccgcg
gtcaaccggaccgaaagggtaaccgtgaagctgcaggtgtctctggcgcagctcatcagc
gtaaatgaaagggagcagatcatgaccaccaatgtctggcttactcagcactgggtagac
tacaggttatcgtgggaccccgccaagtacgaaggaatcgacaagctgcgcattccctcc
agacacgtctggctgcctgatatcgtcctctataacaatgccgacgggacgtacgaggtg
acagtcttcaccaacgtcattgtgctctccaacggcagcattaactggctcccgcccgcc
atctacaagagcgcctgcaagatcgaggtcaagcatttccccttcgaccagcaaaactgc
acccttaagttccgctcatggacctacgaccacaccgagatcgacctgatgttgaaaacg
gaggtggccagcatggatgacttcacgcccagcggcgagtgggacatcctggcgctgcca
ggtcggcggacggtcaacccgctggatgccacctatgtggacgtcacgtatgacttcatc
atcaagaggaagccacttttctacacaatcaacctgatcattccgtgtgtgctgattacc
tctctagccatcctggtcttctaccttccctcagactgcggcgagaagatgaccctgtgc
atttccgtcttgttagccctcaccgtcttcctgctcctgatctccaagatcgtccccccg
acatctctggatgtgccgctgatcggcaagtacctgatgttcaccatggtgctggtgacc
ttctccatcatcaccagcgtatgcgtgctcaacgtccaccaccgttcccccagcacccac
accatgcccccctgggtcaagctcatctttctggtcaaactgccgagcttgctgttcatg
agacgccctcacaataacgctgcccttcataggctgcgaaaacagagatcgaggaggaca
gttctgggcttgggttgccccgtcacatcccaaactggttttcccaagacgacttcagcc
ttactgccttcagactccgccttctcaacactaggacataaaagtgcccccactctgggc
cttagccaccccaacagaggcgagttgtggtctacggattgcattcctggttctttggac
ctccatcttagaaccaattcaaacttagctacagacgtccaagaggcggtgaatggggtg
cgttttgtagcggaccacatgatggcggaagatgacgatcaaagtgtggtcgaagactgg
aagtacgtggccatggtggtggatcgcatgttcctgtggatcttcgtgattgtgtgcgtg
gtgggcacgctgggcttgttcctccagcccctcttccagagtcaggtgtctcaccaacat
cagcagcccacctctgagatgcctcgcatttga
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