Syngnathus scovelli (Gulf pipefish): 125967426
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Entry
125967426 CDS
T08785
Name
(RefSeq) cyclic nucleotide-gated channel beta-3 isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
125967426
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125967426
Ion channels [BR:
sscv04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
125967426
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Ortholog
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GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
125967426
NCBI-ProteinID:
XP_049574470
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All DBs
Position
4:24066219..24075266
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AA seq
976 aa
AA seq
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MTSWLLQLVPRPPESNRLQEPLSSTRDESKQEVASSRGSQAFPPDVEQAAVARGRGALPS
AVCPDATAAVARLPAESTRGDTVPAGIMGWIVGSLERTLPRPARQQEADDDVQESVVKKS
QLQPLDVQPSAKDADEEKRGDNQFEDEGPTPPEENVETDAGQAVPAPVEERLRRQRLEAA
RVAEDVARKAALEAVRRLEAEHSAASRIRQLPNIPEEQNEDRPGRSAGSPEVTGALSASS
AGRPDDRVESPWRPEAAVDCCSAGLRLETGIPEIVTPPPSCSPEPALSRTAELSAEQEDD
DDADESVRVGLESETCRGDLLTADVRPASAASVGSVVVQDRLCQLVRLFKGRTERHKDRL
VDPDDSEQESPTASPSKAPPPPPSPPPGADEMEAPMGGKEEEAALRLDILGHPLQIPKLA
MPKWLGAMAEFRFPSSIDPFTDLVYVLWLFLVVAAWNWNVWLIPVRWAFPYQSPENLHLW
LLVDYTCDLVYIVDILIFQPRLQFVRGGDIVCDKKAMQENYMTTERFKMDVISLFPMEIF
YYWTGVTSLLRFPRLLKYHVFFEFNDRMEAVMKKAYIYRVIRTSTYLLYSLHINACLFYW
GSDYQGLGSTKWVYDGKGNAYIRCYYFAVKTLITIGGLPDPTTVFEICFQLINYFVGVFA
FSIMIGQMRDVVGAATAGENYYRACVDGTAKYMNSYDIPKAVRNRIKTWYDYTWKSQGML
DEQELLLQLPAKMRLDMAVDVNYSIVSKVALFQGCDRQMVFDMLTRLKSVVYLPGDFVCK
KGEIGREMYIIKQGEVQVVGGPDLQTVFVTIRAGSVFGEISLLAGGGGNRRTANVKAHGF
ANLFILDKKDLAEILVHYPESQKLLRKKAKTMLTKDKKPEEKGGGKEAAQVIPVPPDTPK
MFKAAMRVTAQAGMAGTFAKLKKRSGQPQAPDSPCPPAVTMTSATEGEELLAVEAATSKD
QQQVDGAETGVGEDAK
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgacgagctggctgctccaactggttccccgcccccccgagagcaaccgacttcaggaa
ccgctcagcagcacccgggatgagtccaaacaggaagtggcctcgtctcgtgggagccag
gccttccctcccgacgtggagcaggcggccgtcgcacggggccgcggcgctctgccctcg
gccgtctgcccggacgctacggcggcagtcgcgcgccttccggcggagtccacgcgtggg
gacaccgtcccggctggtattatgggatggatcgtcggcagcctggagcgcaccttaccc
cggcccgcgcgccagcaggaagctgacgatgacgttcaagagtcggttgtgaagaagagc
cagctgcaacctttggatgtccagccgtcagcaaaagacgccgatgaggagaagcggggg
gacaaccagtttgaagatgagggcccgactccgcccgaggagaacgtcgagacggatgcc
ggccaggcggttccggctcctgtggaggaacgcctgcggcggcagcgtctggaggccgcc
cgtgtggctgaggacgtggccaggaaggcggcgctggaggccgtgcgacggctggaggca
gaacactcggctgcctcgcgcatccgacaacttccaaacatcccggaggagcaaaacgag
gaccgacccgggcgctcggccggctcaccggaagtcacgggcgccctttccgcgagttcg
gccggccggccagacgaccgggtagagtcaccctggagacccgaagcggctgtcgattgc
tgttcagcaggtctgcgactggaaacgggaatccccgagattgttacgccgccaccgagc
tgctcccccgagccggcactcagcaggaccgcagagctctcggcggagcaggaggatgac
gacgacgccgacgagtcggtgagggtcggactcgagtctgagacctgtcgaggggacttg
ctgactgcagacgtccgtccggcgtctgcggccagcgtcggaagcgtcgtggtccaggac
cgcctctgccagctggtacggctcttcaaaggtcggacggaacgccacaaagaccgtctg
gtggatccggacgattcggagcaggaaagtcccaccgcctctcccagcaaagctccgcct
cccccaccctcacccccacctggagcagacgagatggaagcccccatgggtggaaaggaa
gaagaagctgcgttacgcctcgacattctgggacatccacttcaaattcccaaactcgca
atgcccaaatggctcggagccatggcggagttccggttcccctccagcattgacccgttc
accgacttggtctacgtgctgtggctgttcttggtggtcgcggcctggaactggaacgtt
tggctgatacccgttcgctgggcctttccctaccagtccccggagaacctccacctttgg
ctcctggtcgactacacctgcgatctggtttacattgtggacatcctgatcttccagccc
cgcctacagtttgtccgcgggggggacattgtgtgtgataaaaaagccatgcaagaaaac
tacatgaccaccgagagattcaagatggacgttatcagtctgtttcccatggaaatcttc
tactactggacaggagtcacgtctctgctaagattccctcgcctgctcaagtaccatgtt
ttcttcgagtttaacgacagaatggaagcggtgatgaagaaggcctacatctacagggtg
atccggacctccacctacctactgtactctctgcacatcaacgcgtgcctgttctactgg
ggctccgactaccaaggcttaggttcaaccaagtgggtttacgacggaaaaggcaacgct
tacatccgatgttactactttgcggtgaagacgttgatcaccattggtggtcttcccgac
ccaaccaccgtctttgagatctgctttcagctcatcaactattttgtgggcgtcttcgct
ttctccatcatgatcggacagatgagggacgtggtgggggcggccacggctggcgagaac
tactaccgggcctgcgtggacggcaccgccaaatacatgaactcgtatgacattcccaag
gccgtccgtaaccggatcaagacctggtacgactacacgtggaagagccaaggcatgctg
gacgagcaagagttgctgctgcagcttcctgccaagatgagactggacatggctgtggat
gtcaactactccatcgttagcaaggtggcgctcttccagggttgtgatcgtcaaatggtg
tttgacatgctgacaagactcaaatctgttgtctacctgccaggagactttgtgtgtaag
aagggtgagatcggcagggaaatgtacatcatcaagcagggcgaggtccaagtggtgggc
ggtccagaccttcagacagtttttgtcaccatcagggcaggctcagtgtttggcgagatc
agtttgttggccgggggcggaggaaaccgtcgcactgccaacgtgaaggcacatggattc
gccaacctgttcatcctggacaagaaggacctggcagaaatcctggttcactatccagag
tcccagaaacttctccgcaagaaggccaagaccatgctgactaaggacaagaagccggag
gaaaagggaggcggcaaagaggccgcccaggtcatcccggtcccaccagacacgcccaaa
atgttcaaggcggccatgcgggtgacggcgcaggcgggaatggcgggaaccttcgccaaa
ctcaagaagcgctcgggccagcctcaggctccggactctccttgcccaccggccgtcacc
atgacatcagcgacggaaggggaggagcttctagcggtggaggcggcgacatctaaagac
cagcagcaagtggacggagcagagactggagtgggggaagacgccaagtga
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