Syngnathus scovelli (Gulf pipefish): 125967430
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Entry
125967430 CDS
T08785
Symbol
chsy1
Name
(RefSeq) chondroitin sulfate synthase 1
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
sscv01100
Metabolic pathways
Module
sscv_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
125967430 (chsy1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sscv01003
]
125967430 (chsy1)
Enzymes [BR:
sscv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
125967430 (chsy1)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
125967430 (chsy1)
Glycosyltransferases [BR:
sscv01003
]
Glycan extension
O-Glycan
125967430 (chsy1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Galactosyl_T
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
125967430
NCBI-ProteinID:
XP_049574484
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Position
4:24117522..24123336
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AA seq
805 aa
AA seq
DB search
MISCLSGGMAGRSRRAWLSVLLGLVLGFTLASRLILPKAAEIAKGNPGGCRLNERLGAAG
ALWPPRDSRPPATETTASGAARSSDFLFVGVMTAQKYLNSRAVAAHRTWARSIPGRVEFF
SSEGSNASAPVPLVALRGADDSYPPQKKSFLMLKYMHDHYLERYQWFMRADDDVYVKGRR
LESFLRRLNGSAPIFLGQTGMGARDELGKLALEPGENFCMGGPGVVMSREVLRRVAPHLR
RCLRQMHTAHEDVEVGRCVRRFAGVQCVWSYEMQQLFYENYEPDKKGFIRELRSGKIHRA
VTLHPNKSPPHQYRLHAYLLSRRAAALRHRTVRLHRELVGMARPGAPDPSREDRLLGASP
SFMRFRPRRRSDVLEWDFLSARHLFTAWDGQPPRRGTDAAQRQALDDIVMQVMEMINANA
ETRGRVIDFKEIQYGYRRVNPLYGAEYVLDLLLLYKKHKGRSVTVPVRRHAYLQQTFSRI
QLREEGPTDANSLAAHVDRHSDSLSFLSLTSLKMLVPFKLAPAVGQRADAGRDDKVNILV
PLSGRYDVFARFMANVERVCLIPKQNVKLLVLLFNADDGAERVKQVELMREYHIKYPRAE
LEIKAVAGPFSRALALEEGSARFSDHSLLFYCDVDLLFTADFLQRCRANAAAGRSSYFPV
VFSQYDPKVVYGGGTQRADANHYAFTAKTGLWRNFGFGVVCAHKGDLFRAGGFNTTIRGW
GLEDVDLFDKFLRSGVAPFRSSDPGIVHVHHPVTCDPHLEPRQHKMCLGSRASSRGSVRQ
LAQLWLDKKQLGPPLAANASLRLTA
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgatttcatgcttgtctggagggatggcaggtcggagccggagagcttggttgagcgtc
ctgctgggtctggtgctgggcttcacgctggcctctcgcctcatcctgcccaaggccgcg
gagatcgccaaaggcaacccgggcggctgccgcctcaacgagcgactcggcgccgctggc
gccctatggccacctcgcgacagccgcccgccggccacggagacgacggcctcgggagcc
gcgcgctcctctgacttcctcttcgtgggcgtcatgaccgcgcaaaagtacctcaacagc
cgcgcggtggccgcgcacagaacgtgggcccggagcatcccgggccgggtggagttcttc
tccagcgagggctccaatgcctcggcgcccgtgccgctggtggcgctgcgcggcgccgac
gactcctacccgccgcagaagaagtccttcctgatgctcaagtacatgcacgaccactac
ctggagcgctaccagtggttcatgcgggccgacgacgacgtctacgtcaaaggccggcgt
ctggagagctttctgcgccgcctcaacggcagcgcacccatcttcctgggccagactggc
atgggcgcccgcgacgagctgggcaagctggcgctggagcctggcgagaacttctgcatg
ggcgggcccggtgtggtcatgagccgagaagtcctgcgccgcgtggcgccgcacctgcgc
cgctgcctgcgccagatgcacacggcgcacgaggacgtggaggtggggcgctgcgtgcgc
cgcttcgccggggtccagtgcgtctggtcctacgagatgcagcagctgttctacgagaac
tacgagcccgacaagaaaggcttcatccgtgagctgcgcagcggcaagattcaccgggcc
gtcacgctgcaccccaacaagagcccgcctcaccagtatcgcctgcacgcctatctgttg
agccggcgcgcggccgcgctgcgccaccgcaccgtgcgcctccaccgcgagctggtcggg
atggcgcgcccgggtgcccccgatccgagtcgcgaggaccggctgctgggggcgtcgcct
tccttcatgaggttccggccccgccgccgcagcgacgtgctggaatgggacttcctgagc
gccaggcacctcttcaccgcctgggacgggcagccgccccgccgcgggaccgacgccgcg
cagcgccaagccctcgacgacatcgtcatgcaggtgatggagatgatcaacgccaacgcc
gagacccgcggccgcgtcatcgacttcaaggaaattcagtacggctaccgacgggtcaac
ccgctctacggcgccgagtacgtgctggacctgctgctgctctacaagaagcacaaaggc
aggagcgtgacggtgccggtgcgcagacacgcgtacctgcagcagaccttcagccgcatc
cagttgcgcgaggaggggcccaccgacgccaattccctggcggcgcacgtcgaccgccac
tcggactcgctctccttcctgtccctcacctccctgaagatgctggtccccttcaagctg
gcgccggccgtcggccagcgtgcggacgccggccgtgacgacaaggtcaacatcctggtg
ccgctgtcgggccgctacgacgtctttgcgcgcttcatggccaacgtggaacgcgtgtgc
ctgatccccaagcagaacgtcaagctcctcgtcctgctcttcaacgccgacgacggcgcc
gagcgggtcaagcaggtggagctgatgcgcgagtaccacatcaagtacccgcgggccgag
ctggagatcaaagccgtggccggccccttctcgcgggcgctggcgctggaggagggctca
gcgcgcttctccgaccattcgctgctcttctactgcgacgtggatctcctcttcaccgcc
gacttcctgcagcgctgcagggccaacgcggcggccggccgctcctcctacttccccgtc
gttttcagccagtacgaccccaaggtggtgtacggcggcggcacgcaacgcgccgacgcc
aaccactacgccttcaccgccaagacgggcctatggaggaactttggctttggggtggtg
tgcgcccacaagggcgatctgttccgcgccgggggcttcaacaccaccatccggggttgg
ggcctggaggacgtggacctctttgacaagttcctgcgctcgggcgtcgcgccgttccgc
agcagcgacccgggcattgtgcacgtgcatcacccggtcacctgcgacccccacctggag
ccgaggcagcacaagatgtgcttggggtccagggcgtcctcgcggggttccgtgcgccag
ctggcccagctatggttggacaagaagcagctgggcccgccactggccgccaacgcctcg
cttcgcctgacagcctga
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