KEGG   Syngnathus scovelli (Gulf pipefish): 125967439
Entry
125967439         CDS       T08785                                 
Symbol
snrpa1
Name
(RefSeq) U2 small nuclear ribonucleoprotein A' isoform X1
  KO
K11092  U2 small nuclear ribonucleoprotein A'
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125967439 (snrpa1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sscv03041]
    125967439 (snrpa1)
Spliceosome [BR:sscv03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    125967439 (snrpa1)
 Complex B
    125967439 (snrpa1)
 Complex C
   U2 SnRNP specific factors
    125967439 (snrpa1)
SSDB
Motif
Pfam: LRR_9 LRR_4 LRR_8 DHU1_N LRR_14 LRR_NXF1-5
Other DBs
NCBI-GeneID: 125967439
NCBI-ProteinID: XP_049574512
LinkDB
Position
4:24128753..24131802
AA seq 280 aa
MVKLSAELIEQAAQYTNPVRDRELDLRGYKIPVLENLGATLDQFDTVDFSDNEIRKLDGF
PLLKRLKTLLMNNNRICRIGENLEQSLPALRELILTNNKIQELGDLEPLASVKTLTLLSL
LRNPVTNKKHYRLYVVHKIPQLRVLDFQKVKLKVGGARPAAVLSARPGPGGKRSRLGPWR
SVQAGCARVPARGDRSRREALTAVTVTTSACGRRSARRRRKCSKANAALSWRRISPSRAK
RSRPEWRRSWRRRGRARPTPKLKPSRTPSPRRRHWLRWSA
NT seq 843 nt   +upstreamnt  +downstreamnt
atggtgaagctttctgctgagttaattgagcaggcagctcagtacacgaacccggtgagg
gacagagagctggacctgaggggttataaaattccagttctggagaatctgggagccact
ctggaccagttcgacacggtggacttctcggataacgaaatccgcaaactggacggcttc
ccgctcctcaagcgactcaagaccttgctgatgaacaacaacaggatctgtcgtatcgga
gagaacctggagcagagtcttcccgctctgcgagaactcatcctgaccaacaacaagatc
caggaactgggcgacttggagccgctggcgtcggtgaagacgttgactctgctcagcctg
ctgaggaatcctgtgaccaacaagaagcactacaggctctacgtggtccacaaaatcccg
caacttcgcgtgctggacttccagaaggtcaaactcaaggtggggggtgccaggccggcg
gctgttttgtccgcacgtccgggtccgggcgggaagcgctcacgtctcggcccgtggaga
tcggttcaggcgggatgcgctcgcgtcccggcccgtggagatcggtccaggcgagaagcg
ctcacggccgtcactgtaacgacgtctgcttgtggtcgcaggagcgccaggaggcggaga
aaatgttcaaaggcaaacgcggcgctcagctggcgaaggatatcgccaagcagagcaaaa
cgttcacgcccggaatggcggcgcagctggagaaggcgaggacgggcccgtcccacgccg
aagttgaagccatcaagaacgccatcgcccaggcgtcgtcactggctgaggtggagcgct
tga

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