Syngnathus scovelli (Gulf pipefish): 125967447
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Entry
125967447 CDS
T08785
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 1 isoform X1
KO
K04349
Ras-specific guanine nucleotide-releasing factor 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04010
MAPK signaling pathway
sscv04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125967447
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125967447
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
GOLGA2L5
MYO6_lever
P4Ha_N
IQ
Motif
Other DBs
NCBI-GeneID:
125967447
NCBI-ProteinID:
XP_049574522
LinkDB
All DBs
Position
4:complement(17975129..17990544)
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AA seq
1250 aa
AA seq
DB search
MQKGMRLNDGHVTYLALLARKDGTRRGCLSKKSSDNTKWHPKWFCLLQNMLFYFENDSSS
RPSGLYLLEGCVCDRAPSPKPPPSAKECLQYYFTITFNHDNQKALELRTEDVKDCDEWVA
AITQASYRNLATEHESLMQKYLHLLQIVETEKTVAKQLRQQIEDGEIEIERLKSEIASLL
KDNEKIQSNPEVPPSDDDTEIQKIKKVQSFLRGWICRRKWKTIIQDYIRSPHAESMRKRN
QVVFSMLEAEAEYVQQLHILVNNFLRPLRMAASSKKPPITHDDVSSIFLNSETIMFLHQI
FYQGLKARIASWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQILAHCKQNRDFDKLLKQ
YETNPDCEERTLETFLTYPMFQIPRYILTLHELLAHTPHEHVERNSLDYAKSKLEELSRI
MHDEVSETENIRKNLAIERMIVEGCEVLLDTSQTFVRQGSLIQVPMSEKGKITRGRMGSL
SLKKEGERQCFLFSKHLIICTRGSGGKLHITKNGVVSLIDCTLMEDPEGTDDEFKGERNG
QDTEHLDFKVIVEPKDGQPYTVILVASSRQEKSAWTSDISQCIDNIRCNGLMMNAFEENS
KVSVPQMIKSDTSLYCDDVDIRFSKMMNSCKVLQIRYASVERLLERLTDLRFLSIDFLNT
FLHSYRVFTSADVMLDKLITIYKKPISAIPARALELFFASSQSNKLLYGESPTSPRGSRK
FSSPPPLAITKTSSPNRRRKLSLNIPIITGGKALDLAALNCSPNSMHAAMSPFGKTALDI
NKLFVTSTLASKIPDEGETKAESKADEPAPNKQDLSVREECDKEPCQSDETEAEMSPPKS
PSTPKNVKSKNEFTLFSFNNSMVVSSCRELDNNRSALSAASAFAIATAGANEGTPTKEKY
RRMSLAATGFPTDQRNGDKEFVIRRAATNRVLNVLRHWVSKHAQDFELNSELKTRVIGFL
EEVMHDPELLTQERKAAANIIRTLTQEDPGDNQVTMEEIIQTAMEECRSEPFENHSALEI
AEQLTLLDHLVFKVIPYEEFFGQGWMKNDKNERTPYIMKTTKHFNEISDRIATEILQWDD
VNMRVAAIEKWVAAADICRCLHNYNAVLEITSSLNRSAIFRLKRTWLKVSKQTKTVIDKL
QKLVSSEGRFKNLREALKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDNLVNFSKMRMIS
HIIREIRQFQQTAYKIDYQPKVAKYLVDSSSVLGEERLYETSLRIEPKTS
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagggcatgaggctcaacgatggccatgtcacctatctggcgctgttggccagg
aaggacggcaccaggcgcgggtgcctgagcaaaaagagctcggacaacaccaaatggcac
cccaagtggttctgcctgctgcagaacatgctcttctacttcgagaacgactccagctcg
cgcccctccggactctacctgctggagggatgcgtgtgcgacagagcgccctcacccaag
ccgcccccctccgctaaggaatgtctgcagtattattttacaatcacattcaatcatgac
aaccagaaggctttggagctgcgcacagaagacgtcaaggactgtgacgagtgggtcgcc
gccatcacgcaggctagttacaggaacctagctacagagcatgagagcctcatgcagaag
tatctgcaccttctacaaatagtggagacggagaaaacggttgccaagcaacttcgacaa
cagatagaggatggggaaatcgagatagagcggctaaaatctgagattgcttctctgctg
aaggacaacgagaaaatccagtccaatccggaggtaccgccaagtgatgacgacactgag
atccagaagataaaaaaggtccagagtttcctgcgaggttggatttgccgcaggaagtgg
aaaaccatcatccaggactacattcgttcaccccacgcggagagcatgaggaagaggaac
caggttgtgtttagcatgctggaggctgaggccgaatacgtccagcaactgcatatcctg
gtcaacaacttcctgcggccgctacgcatggctgcgagctccaagaagccgcccatcacc
catgatgacgtcagcagcatcttcctcaacagcgagaccatcatgttcctccatcagatc
ttctaccaaggtctgaaggcaaggatagcgagctggcctacactggtgctggcggacctc
tttgacattttgctgcccatgttaaacatctaccaagagtttgtacggaaccaccagtac
agcctgcagatcttggcccactgcaaacagaaccgggactttgacaagctacttaagcag
tatgagaccaatccagactgcgaggaaagaacactggagaccttcctaacttaccccatg
tttcagatccctcgttatatcctaaccctccatgaattgctggctcacactcctcatgag
catgtggagagaaatagcttggactatgccaaatccaaactcgaggaactttcgagaata
atgcacgacgaggtgagcgaaaccgagaacattcgaaagaatctggcaattgagcgaatg
attgtggagggctgcgaagtactgctggacaccagccagacctttgtcagacaaggttct
ctgatccaagtgcccatgagcgagaaaggcaaaatcaccaggggccgcatgggctcttta
tccctgaagaaggaaggtgagagacagtgcttcctcttttccaaacatctcatcatctgc
actcgaggctcaggagggaaactgcacatcaccaagaatggtgtggtatccctcattgac
tgcacactgatggaggatcctgagggcactgatgatgagttcaaaggagagcggaatggc
caggacaccgagcacctggactttaaagtcatagtggagcccaaagatgggcagccttac
actgtcatcctggtggcctcatcacgacaagagaagtcggcgtggaccagtgacatcagc
cagtgcatcgacaacatccgctgcaatggtctgatgatgaatgcttttgaggaaaacagt
aaagtctccgtgccacagatgattaagtccgacaccagtttgtactgcgacgatgtggac
atacgcttcagcaagatgatgaactcgtgcaaggtgctgcagatccgctacgccagcgtg
gagcgcttgttggagaggctgaccgacctacgcttcctctccatcgacttcctcaacacc
ttccttcactcttaccgcgttttcaccagtgcagacgtcatgctggacaagctcattacc
atctacaagaagcctatcagtgccatccctgcacgtgctttggagctcttcttcgccagc
agccagagtaacaaacttctgtacggcgagtcacccacatcgccacgtggcagtcgcaaa
ttctcatcccccccgccgctcgccatcaccaagacgtcatcacccaatcgccgccgcaag
ctctcgctcaacattcccattatcacgggaggcaaagcgctggacctggccgcgctcaat
tgctccccaaacagcatgcacgccgccatgtctcccttcggtaagaccgccctggacatc
aacaagctgtttgtgaccagcaccttggcaagcaagatccccgatgagggggaaaccaag
gccgagagcaaagccgatgagcctgcccccaacaagcaagatctgtcagtgagagaggaa
tgtgacaaagaaccatgtcagagtgacgagactgaagcggagatgtctcctcccaagtcc
ccgtcgacacccaaaaacgtcaaatcaaaaaacgagtttacgctgttctccttcaacaac
agcatggtggtgtcctcttgccgggagctggacaataaccgcagcgctctttcggcggcc
tcggccttcgctatcgccacagctggtgccaacgagggcacgccgacgaaggagaagtac
cgccgcatgtcccttgctgccacaggctttcctacagaccagaggaatggggacaaagag
tttgttatcagaagagcagctacaaaccgagttctgaacgtgctgcgtcactgggtttcc
aaacacgcccaggactttgagctgaactctgagctgaagacaagggtaattggctttctt
gaggaggtgatgcatgacccagaactgctgacacaggaaaggaaggctgctgctaacatt
attaggactctaacacaggaggaccccggagacaaccaggtcactatggaagaaatcatt
caaacggcgatggaggagtgcaggagtgagccgtttgagaaccactctgccctggagatc
gccgagcagctcactctgcttgatcacttggtctttaaggtcatcccgtacgaggagttc
ttcggtcaaggctggatgaagaacgacaagaacgagagaactccttacatcatgaaaaca
accaaacacttcaacgaaatcagcgacaggattgccactgaaatcctgcagtgggacgac
gtcaacatgcgggtggcggccatcgagaagtgggtggcggcggcggacatttgtcgctgc
cttcacaactacaacgctgttctggagatcacgtcttcgctcaaccgcagtgccatcttc
cgcctcaagaggacctggctcaaagtctccaagcagactaagacagtaattgacaagtta
cagaagttggtgtcatctgagggccgcttcaaaaacctgagggaggcgctcaagaactgc
gacccaccttgtgttccctacctgggcatgtacctgactgacttggccttcattgaggaa
ggcacacccaactacactgaggacaacctggtcaacttttccaagatgagaatgatatct
cacatcatcagagaaataaggcagttccagcagacggcctacaagatcgattatcaacca
aaggtggcaaagtacttggtggacagcagttccgtgctgggcgaggagcgtctttacgag
acgtccttgagaatcgaacccaaaacatcatag
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